7Z9L
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7z9l by Molmil](/molmil-images/mine/7z9l) | Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex | Descriptor: | DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide | Authors: | Ghosh, A, Trajkovski, M, Teulade-Fichou, M.P, Gabelica, V, Plavec, J. | Deposit date: | 2022-03-21 | Release date: | 2022-08-31 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Phen-DC 3 Induces Refolding of Human Telomeric DNA into a Chair-Type Antiparallel G-Quadruplex through Ligand Intercalation. Angew.Chem.Int.Ed.Engl., 61, 2022
|
|
1LVS
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1lvs by Molmil](/molmil-images/mine/1lvs) | THE SOLUTION STRUCTURE OF D(G4T4G3)2 | Descriptor: | 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*G)-3' | Authors: | Crnugelj, M, Hud, N.V, Plavec, J. | Deposit date: | 2002-05-29 | Release date: | 2002-07-24 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | The solution structure of d(G(4)T(4)G(3))(2): a bimolecular G-quadruplex with a novel fold. J.Mol.Biol., 320, 2002
|
|
6R8E
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6r8e by Molmil](/molmil-images/mine/6r8e) | SC14 G-hairpin | Descriptor: | DNA (5'-D(*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*GP*T)-3') | Authors: | Lenarcic Zivkovic, M, Trantirek, L, Plavec, J. | Deposit date: | 2019-04-01 | Release date: | 2021-02-03 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | Insight into formation propensity of pseudocircular DNA G-hairpins. Nucleic Acids Res., 49, 2021
|
|
7QA9
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7qa9 by Molmil](/molmil-images/mine/7qa9) | 10bp DNA/DNA duplex | Descriptor: | DNA (5'-D(*CP*CP*AP*TP*TP*AP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*GP*G)-3') | Authors: | Li, Q, Trajkovski, M, Fan, C, Chen, J, Zhou, Y, Lu, K, Li, H, Su, X, Xi, Z, Plavec, J, Zhou, C. | Deposit date: | 2021-11-16 | Release date: | 2022-11-16 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | 4'-SCF 3 -Labeling Constitutes a Sensitive 19 F NMR Probe for Characterization of Interactions in the Minor Groove of DNA. Angew.Chem.Int.Ed.Engl., 61, 2022
|
|
7W0V
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7w0v by Molmil](/molmil-images/mine/7w0v) | C4'-SCF3-DT modifeid DNA-DNA duplex | Descriptor: | DNA (5'-D(*CP*CP*AP*TP*(DSW)P*AP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*GP*G)-3') | Authors: | Li, Q, Trajkovski, M, Fan, C, Chen, J, Zhou, Y, Lu, K, Li, H, Su, X, Xi, Z, Plavec, J, Zhou, C. | Deposit date: | 2021-11-18 | Release date: | 2022-11-16 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | 4'-SCF 3 -Labeling Constitutes a Sensitive 19 F NMR Probe for Characterization of Interactions in the Minor Groove of DNA. Angew.Chem.Int.Ed.Engl., 61, 2022
|
|
2LEJ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2lej by Molmil](/molmil-images/mine/2lej) | human prion protein mutant HuPrP(90-231, M129, V210I) | Descriptor: | Major prion protein | Authors: | Biljan, I, Ilc, G, Giachin, G, Raspadori, A, Zhukov, I, Plavec, J, Legname, G. | Deposit date: | 2011-06-16 | Release date: | 2011-08-17 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | Toward the Molecular Basis of Inherited Prion Diseases: NMR Structure of the Human Prion Protein with V210I Mutation. J.Mol.Biol., 412, 2011
|
|
6GIR
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6gir by Molmil](/molmil-images/mine/6gir) | Arabidopsis thaliana cytosolic seryl-tRNA synthetase | Descriptor: | Serine--tRNA ligase, cytoplasmic | Authors: | Kekez, I, Kekez, M, Rokov-Plavec, J, Matkovic-Calogovic, D. | Deposit date: | 2018-05-15 | Release date: | 2019-01-02 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.343 Å) | Cite: | Arabidopsis seryl-tRNA synthetase: the first crystal structure and novel protein interactor of plant aminoacyl-tRNA synthetase. FEBS J., 286, 2019
|
|
7NWD
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7nwd by Molmil](/molmil-images/mine/7nwd) | Three-quartet c-kit2 G-quadruplex stabilized by a pyrene conjugate | Descriptor: | POTASSIUM ION, c-kit2_py1 | Authors: | Peterkova, K, Durnik, I, Marek, R, Plavec, J, Podbevsek, P. | Deposit date: | 2021-03-16 | Release date: | 2021-08-04 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry. Nucleic Acids Res., 49, 2021
|
|
2KWG
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2kwg by Molmil](/molmil-images/mine/2kwg) | Solution structure of a fully modified 2'-F/2'-OMe siRNA construct | Descriptor: | 5'-R(*(GF2)P*(OMG)P*(GF2)P*(OMU)P*(AF2)P*(A2M)P*(AF2)P*(OMU)P*(AF2)P*(OMC)P*(AF2)P*(OMU)P*(UFT)P*(OMC)P*(UFT)P*(OMU)P*(CFZ)P*(A2M)P*(UFT)P*(OMU)P*(UFT))-3', 5'-R(P*(A2M)P*(UFT)P*(OMG)P*(AF2)P*(A2M)P*(GF2)P*(A2M)P*(AF2)P*(OMU)P*(GF2)P*(OMU)P*(AF2)P*(OMU)P*(UFT)P*(OMU)P*(AF2)P*(OMC)P*(CFZ)P*(OMC)P*(UFT)P*(OMU))-3' | Authors: | Podbevsek, P, Bhat, B, Plavec, J. | Deposit date: | 2010-04-09 | Release date: | 2010-07-21 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution-state structure of a fully alternately 2'-F/2'-OMe modified 42-nt dimeric siRNA construct. Nucleic Acids Res., 38, 2010
|
|
1U64
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1u64 by Molmil](/molmil-images/mine/1u64) | The Solution Structure of d(G3T4G4)2 | Descriptor: | 5'-D(*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3' | Authors: | Sket, P, Crnugelj, M, Plavec, J. | Deposit date: | 2004-07-29 | Release date: | 2004-10-26 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH4+ ions. Bioorg.Med.Chem., 12, 2004
|
|
2KPV
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2kpv by Molmil](/molmil-images/mine/2kpv) | |
2LOD
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 2lod by Molmil](/molmil-images/mine/2lod) | Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops | Descriptor: | DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*CP*GP*GP*G)-3') | Authors: | Marusic, M, Sket, P, Bauer, L, Viglasky, V, Plavec, J. | Deposit date: | 2012-01-23 | Release date: | 2012-05-30 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops. Nucleic Acids Res., 40, 2012
|
|
1XV6
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 1xv6 by Molmil](/molmil-images/mine/1xv6) | |
8C7B
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8c7b by Molmil](/molmil-images/mine/8c7b) | |
8C7A
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8c7a by Molmil](/molmil-images/mine/8c7a) | |
8P1Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8p1y by Molmil](/molmil-images/mine/8p1y) | |
8P1Z
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8p1z by Molmil](/molmil-images/mine/8p1z) | |
8JIC
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8jic by Molmil](/molmil-images/mine/8jic) | |
8JIH
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8jih by Molmil](/molmil-images/mine/8jih) | |
8PMB
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8pmb by Molmil](/molmil-images/mine/8pmb) | |
8Q5Q
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8q5q by Molmil](/molmil-images/mine/8q5q) | d(ATTTC)3 dimeric structure | Descriptor: | DNA (5'-D(*AP*TP*TP*TP*(DNR)P*AP*TP*TP*TP*CP*AP*TP*TP*TP*C)-3') | Authors: | Trajkovski, M, Pastore, A, Plavec, J. | Deposit date: | 2023-08-09 | Release date: | 2024-02-07 | Last modified: | 2024-03-06 | Method: | SOLUTION NMR | Cite: | Dimeric structures of DNA ATTTC repeats promoted by divalent cations. Nucleic Acids Res., 52, 2024
|
|
6GZN
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6gzn by Molmil](/molmil-images/mine/6gzn) | |
6IA4
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6ia4 by Molmil](/molmil-images/mine/6ia4) | |
6IA0
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6ia0 by Molmil](/molmil-images/mine/6ia0) | |
6ZRM
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6zrm by Molmil](/molmil-images/mine/6zrm) | G-quadruplex with a G-A bulge | Descriptor: | DNA (5'-D(*TP*GP*GP*GP*AP*GP*GP*GP*AP*GP*CP*GP*GP*GP*AP*GP*TP*GP*GP*G)-3') | Authors: | Lenarcic Zivkovic, M, Plavec, J. | Deposit date: | 2020-07-13 | Release date: | 2021-05-26 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Structure of a DNA G-Quadruplex Related to Osteoporosis with a G-A Bulge Forming a Pseudo-loop . Molecules, 25, 2020
|
|