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PDB: 497 results

8H2G
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BU of 8h2g by Molmil
Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Park, J.H, Ishimoto, N, Park, S.Y.
Deposit date:2022-10-06
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural basis for hydroxy-carboxylic acid receptor 2 activation and allosteric mechanism
To Be Published
8IC0
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BU of 8ic0 by Molmil
Cryo-EM structure of CXCL8 bound C-X-C chemokine receptor 1 in complex with Gi heterotrimer
Descriptor: C-X-C chemokine receptor type 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Ishimoto, N, Park, J.H, Park, S.Y.
Deposit date:2023-02-10
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Structural basis of CXC chemokine receptor 1 ligand binding and activation.
Nat Commun, 14, 2023
7YXA
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BU of 7yxa by Molmil
XFEL crystal structure of the human sphingosine 1 phosphate receptor 5 in complex with ONO-5430608
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[6-(2-naphthalen-1-ylethoxy)-2,3,4,5-tetrahydro-1H-3-benzazepin-3-ium-3-yl]butanoic acid, ...
Authors:Lyapina, E, Marin, E, Gusach, A, Orekhov, P, Gerasimov, A, Luginina, A, Vakhrameev, D, Ergasheva, M, Kovaleva, M, Khusainov, G, Khorn, P, Shevtsov, M, Kovalev, K, Okhrimenko, I, Bukhdruker, S, Popov, P, Hu, H, Weierstall, U, Liu, W, Cho, Y, Gushchin, I, Rogachev, A, Bourenkov, G, Park, S, Park, G, Huyn, H.J, Park, J, Gordeliy, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
Deposit date:2022-02-15
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for receptor selectivity and inverse agonism in S1P 5 receptors.
Nat Commun, 13, 2022
5X4U
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BU of 5x4u by Molmil
PAC from Oscillatoriaacuminata after 60 seconds photoactivation
Descriptor: FLAVIN MONONUCLEOTIDE, Photoactivated adenylyl cyclase
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-14
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X4T
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BU of 5x4t by Molmil
PAC from Oscillatoria acuminata after 20 seconds photoactivation
Descriptor: FLAVIN MONONUCLEOTIDE, Photoactivated adenylyl cyclase
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-14
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X4V
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BU of 5x4v by Molmil
Roseoflavin substituted OaPAC
Descriptor: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, Photoactivated adenylyl cyclase
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-14
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1WXR
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BU of 1wxr by Molmil
Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
Descriptor: haemoglobin protease
Authors:Otto, B.R, Sijbrandi, R, Luirink, J, Oudega, B, Heddle, J.G, Mizutani, K, Park, S.-Y, Tame, J.R.H.
Deposit date:2005-01-31
Release date:2005-03-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of heme binding protein, an autotransporter hemoglobin protease from pathogenic escherichia coli
J.Biol.Chem., 280, 2005
5X2U
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Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 80 mM phosphate pH 6.7.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-02
Release date:2017-09-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
5X2R
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Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 10 mM phosphate pH 6.9.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-02
Release date:2017-09-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
5X2T
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Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 7.2.
Descriptor: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-02
Release date:2017-09-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
5X2S
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Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 6.5.
Descriptor: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Ohki, M, Park, S.-Y.
Deposit date:2017-02-02
Release date:2017-09-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
3TVZ
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BU of 3tvz by Molmil
Structure of Bacillus subtilis HmoB
Descriptor: Putative uncharacterized protein yhgC
Authors:Choe, J, Choi, S, Park, S.
Deposit date:2011-09-21
Release date:2012-07-11
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus subtilis HmoB is a heme oxygenase with a novel structure.
Bmb Rep, 45, 2012
2G04
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BU of 2g04 by Molmil
Crystal structure of fatty acid-CoA racemase from Mycobacterium tuberculosis H37Rv
Descriptor: PROBABLE FATTY-ACID-CoA RACEMASE FAR
Authors:Lee, K.S, Park, S.M, Rhee, K.H, Bang, W.G, Hwang, K.Y, Chi, Y.M.
Deposit date:2006-02-11
Release date:2007-01-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of fatty acid-CoA racemase from Mycobacterium tuberculosis H37Rv
Proteins, 64, 2006
2R62
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BU of 2r62 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH
Descriptor: Cell division protease ftsH homolog
Authors:Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
2R65
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BU of 2r65 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division protease ftsH homolog
Authors:Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
3KT1
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BU of 3kt1 by Molmil
Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Descriptor: FE (III) ION, GLYCEROL, PKHD-type hydroxylase TPA1, ...
Authors:Kim, H.S, Kim, H.L, Kim, K.H, Kim, D.J, Lee, S.J, Yoon, J.Y, Yoon, H.J, Lee, H.Y, Park, S.B, Kim, S.-J, Lee, J.Y, Suh, S.W.
Deposit date:2009-11-24
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Nucleic Acids Res., 38, 2010
3KT7
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Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, GLYCEROL, ...
Authors:Kim, H.S, Kim, H.L, Kim, K.H, Kim, D.J, Lee, S.J, Yoon, J.Y, Yoon, H.J, Lee, H.Y, Park, S.B, Kim, S.-J, Lee, J.Y, Suh, S.W.
Deposit date:2009-11-24
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Nucleic Acids Res., 38, 2010
3KT4
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BU of 3kt4 by Molmil
Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Descriptor: FE (III) ION, PKHD-type hydroxylase TPA1
Authors:Kim, H.S, Kim, H.L, Kim, K.H, Kim, D.J, Lee, S.J, Yoon, J.Y, Yoon, H.J, Lee, H.Y, Park, S.B, Kim, S.-J, Lee, J.Y, Suh, S.W.
Deposit date:2009-11-24
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Nucleic Acids Res., 38, 2010
4URP
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BU of 4urp by Molmil
The Crystal structure of Nitroreductase from Saccharomyces cerevisiae
Descriptor: FATTY ACID REPRESSION MUTANT PROTEIN 2
Authors:Song, H.-N, Woo, E.-J, Bang, S.-Y, Jung, D.-G, Park, S.-G.
Deposit date:2014-07-01
Release date:2015-04-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.991 Å)
Cite:Crystal Structure of the Fungal Nitroreductase Frm2 from Saccharomyces Cerevisiae.
Protein Sci., 24, 2015
4N81
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BU of 4n81 by Molmil
Another flexible region at the active site of an inositol monophosphatase from Zymomonas mobilis
Descriptor: Inositol monophosphatase, SULFATE ION
Authors:Hwang, H.J, Park, S.Y, Kim, J.S.
Deposit date:2013-10-16
Release date:2014-10-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Crystal structure of cbbF from Zymomonas mobilis and its functional implication
Biochem.Biophys.Res.Commun., 445, 2014
4N7P
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Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin without phosphate at 2.8 A resolution.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sugiyama, K, Shibayama, N, Park, S.Y.
Deposit date:2013-10-16
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
4N7O
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BU of 4n7o by Molmil
Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin with phosphate at 2.5 A resolution.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sugiyama, K, Shibayama, N, Park, S.Y.
Deposit date:2013-10-16
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
4N7N
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BU of 4n7n by Molmil
Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of full-liganded human haemoglobin with phosphate at 2.75 A resolution.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugiyama, K, Shibayama, N, Park, S.Y.
Deposit date:2013-10-16
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.754 Å)
Cite:Capturing the hemoglobin allosteric transition in a single crystal form
J.Am.Chem.Soc., 136, 2014
4GKF
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BU of 4gkf by Molmil
Crystal structure and characterization of Cmr5 protein from Pyrococcus furiosus
Descriptor: CRISPR system Cmr subunit Cmr5
Authors:Park, J, Sun, J, Park, S, Hwang, H, Park, M, Shin, M.S.
Deposit date:2012-08-11
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Cmr5 from Pyrococcus furiosus and its functional implications
Febs Lett., 587, 2013
6LF2
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BU of 6lf2 by Molmil
SeviL bound to asialo-GM1 saccharide
Descriptor: SeviL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Kamata, K, Ozeki, Y, Park, S.-Y, Tame, J.R.H.
Deposit date:2019-11-28
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata.
Sci Rep, 10, 2020

221051

数据于2024-06-12公开中

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