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PDB: 18 results

7V5C
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BU of 7v5c by Molmil
Cryo-EM structure of the mouse ABCB9 (ADP.BeF3-bound)
Descriptor: ABC-type oligopeptide transporter ABCB9, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
Deposit date:2021-08-17
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7V5D
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BU of 7v5d by Molmil
Cryo-EM structure of the mouse ABCB9 (PG-bound)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ABC-type oligopeptide transporter ABCB9
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Ju, S, Kim, J.W, Min, D.S, Jin, M.S.
Deposit date:2021-08-17
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7VFI
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BU of 7vfi by Molmil
Cryo-EM structure of the mouse TAPL (9mer-peptide bound)
Descriptor: ABC-type oligopeptide transporter ABCB9, ARG-ARG-TYR-GLN-LYS-SER-THR-GLU-LEU, CHOLESTEROL HEMISUCCINATE
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
Deposit date:2021-09-13
Release date:2022-10-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
9LSK
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BU of 9lsk by Molmil
Cryo-EM structure of the Klebsiella pneumoniae CitS (citrate-bound occluded state)
Descriptor: CITRIC ACID, Citrate/sodium symporter, PALMITIC ACID
Authors:Kim, S, Kim, J.W, Park, J.G, Lee, S.S, Choi, S.H, Lee, J.-O, Jin, M.S.
Deposit date:2025-02-04
Release date:2025-03-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Disulfide-stabilized diabodies enable near-atomic cryo-EM imaging of small proteins: A case study of the bacterial Na+/citrate symporter CitS
To Be Published
9LSJ
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BU of 9lsj by Molmil
Cryo-EM structure of the G15C-R66C and T83C-T83C diabody complex (CitS-diabody #7-TLR3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, ...
Authors:Kim, S, Kim, J.W, Park, J.G, Lee, S.S, Choi, S.H, Lee, J.-O, Jin, M.S.
Deposit date:2025-02-04
Release date:2025-03-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Disulfide-stabilized diabodies enable near-atomic cryo-EM imaging of small proteins: A case study of the bacterial Na+/citrate symporter CitS
To Be Published
9LSI
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BU of 9lsi by Molmil
Cryo-EM structure of the S82C-S82C diabody complex (CitS-diabody #2-TLR3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kim, S, Kim, J.W, Park, J.G, Lee, S.S, Choi, S.H, Lee, J.-O, Jin, M.S.
Deposit date:2025-02-04
Release date:2025-03-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Disulfide-stabilized diabodies enable near-atomic cryo-EM imaging of small proteins: A case study of the bacterial Na+/citrate symporter CitS
To Be Published
9LSH
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BU of 9lsh by Molmil
Cryo-EM structure of the wild-type diabody complex (CitS-diabody #1-TLR3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kim, S, Kim, J.W, Park, J.G, Lee, S.S, Choi, S.H, Lee, J.-O, Jin, M.S.
Deposit date:2025-02-04
Release date:2025-03-12
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Disulfide-stabilized diabodies enable near-atomic cryo-EM imaging of small proteins: A case study of the bacterial Na+/citrate symporter CitS
To Be Published
8K7C
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BU of 8k7c by Molmil
Outward-facing structure of human ABCB6 W546A mutant (ADP/VO4-bound)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding cassette sub-family B member 6, MAGNESIUM ION, ...
Authors:Jin, M.S, Lee, S.S, Park, J.G, Jang, E, Choi, S.H, Kim, S, Kim, J.W.
Deposit date:2023-07-26
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:W546 stacking disruption traps the human porphyrin transporter ABCB6 in an outward-facing transient state.
Commun Biol, 6, 2023
8K7B
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BU of 8k7b by Molmil
post-occluded structure of human ABCB6 W546A mutant (ADP/VO4-bound)
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ADP ORTHOVANADATE, ATP-binding cassette sub-family B member 6, ...
Authors:Jin, M.S, Lee, S.S, Park, J.G, Jang, E, Choi, S.H, Kim, S, Kim, J.W.
Deposit date:2023-07-26
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:W546 stacking disruption traps the human porphyrin transporter ABCB6 in an outward-facing transient state.
Commun Biol, 6, 2023
7DNZ
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BU of 7dnz by Molmil
Cryo-EM structure of the human ABCB6 (Hemin and GSH-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7DNY
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BU of 7dny by Molmil
Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
8ZKW
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BU of 8zkw by Molmil
Cryo-EM structure of the Drosophila INDY (apo-asymmetric, pH 6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATIDYLETHANOLAMINE, Protein I'm not dead yet
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published
8ZL2
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BU of 8zl2 by Molmil
Cryo-EM structure of the Drosophila INDY (DIDS-bound asymmetric, pH 6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,4'-Diisothiocyano-2,2'-stilbenedisulfonic acid, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published
8ZL1
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BU of 8zl1 by Molmil
Cryo-EM structure of the Drosophila INDY (apo outward-open, pH 6)
Descriptor: PHOSPHATIDYLETHANOLAMINE, Protein I'm not dead yet
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published
8ZKZ
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BU of 8zkz by Molmil
Cryo-EM structure of the Drosophila INDY (apo-asymmetric, pH8)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATIDYLETHANOLAMINE, Protein I'm not dead yet
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published
8ZL3
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BU of 8zl3 by Molmil
Cryo-EM structure of the Drosophila INDY (DIDS-bound outward-open, pH 6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,4'-Diisothiocyano-2,2'-stilbenedisulfonic acid, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published
8ZL6
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BU of 8zl6 by Molmil
Cryo-EM structure of the Drosophila INDY (apo inward-open, pH 8)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATIDYLETHANOLAMINE, Protein I'm not dead yet
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published
8ZL4
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BU of 8zl4 by Molmil
Cryo-EM structure of the Drosophila INDY (citrate-bound inward-occluded, pH 6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Kim, S, Park, J.G, Choi, S.H, Kim, J.W, Jin, M.S.
Deposit date:2024-05-17
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Cryo-EM structures reveal the cation-independent citrate transport mechanism of the Drosophila longevity protein, INDY
To Be Published

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PDB entries from 2025-04-02

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