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PDB: 527 results

8FZU
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The von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone, Thr-Val linker variant, Expressed with SUMO tag
Descriptor: POTASSIUM ION, SULFATE ION, Transcription factor ETV6,Anthrax toxin receptor 2
Authors:Gajjar, P.L, Litchfield, C.M, Callahan, M, Redd, N, Doukov, T, Lebedev, A, Moody, J.D.
Deposit date:2023-01-30
Release date:2023-07-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Increasing the bulk of the 1TEL-target linker and retaining the 10×His tag in a 1TEL-CMG2-vWa construct improves crystal order and diffraction limits.
Acta Crystallogr D Struct Biol, 79, 2023
3AME
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TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 Q9TQ44T
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
8PE8
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Symmetry expanded D7 local refined map of mitochondrial heat-shock protein 60-like protein from Chaetomium thermophilum
Descriptor: Mitochondrial heat shock protein 60-like protein
Authors:Semchonok, D.A, Kyrilis, F.L, Hamdi, F, Kastritis, P.L.
Deposit date:2023-06-13
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Symmetry expanded D7, locally refined cryo-EM map of mitochondrial heat shock protein 60-like protein Chaetomium thermophilum.
To Be Published
8MSI
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TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 N14SQ44T
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
8OIU
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Cryo-EM reconstruction of the native 24-mer E2o core of the 2-oxoglutarate dehydrogenase complex of C. thermophilum at 3.35 A resolution
Descriptor: Dihydrolipoyllysine-residue succinyltransferase
Authors:Skalidis, I, Tueting, C, Kyrilis, F.L, Hamdi, F, Kastritis, P.L.
Deposit date:2023-03-23
Release date:2023-05-31
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural analysis of an endogenous 4-megadalton succinyl-CoA-generating metabolon.
Commun Biol, 6, 2023
8FAK
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DNA replication fork binding triggers structural changes in the PriA DNA helicase that regulate the PriA-PriB replication restart pathway in E. coli
Descriptor: DNA (5'-D(P*CP*AP*GP*AP*CP*TP*CP*AP*TP*TP*TP*AP*GP*CP*CP*CP*TP*TP*AP*TP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*AP*TP*AP*AP*GP*GP*GP*CP*TP*GP*AP*GP*CP*AP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*GP*CP*GP*TP*GP*CP*TP*C)-3'), ...
Authors:Duckworth, A.T, Ducos, P.L, McMillan, S.D, Satyshur, K.A, Blumenthal, K.H, Deorio, H.R, Larson, J.A, Sandler, S.J, Grant, T, Keck, J.L.
Deposit date:2022-11-28
Release date:2023-05-10
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Replication fork binding triggers structural changes in the PriA helicase that govern DNA replication restart in E. coli.
Nat Commun, 14, 2023
3BL6
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Crystal structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase in complex with formycin A
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase
Authors:Siu, K.K.W, Lee, J.E, Smith, G.D, Horvatin, C, Howell, P.L.
Deposit date:2007-12-10
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Acta Crystallogr.,Sect.F, 64, 2008
8PE4
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Capsid structure of the L-A helper virus from native viral communities
Descriptor: Major capsid protein
Authors:Schmidt, L, Tueting, C, Stubbs, M.T, Kastritis, P.L.
Deposit date:2023-06-13
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Delineating organizational principles of the endogenous L-A virus by cryo-EM and computational analysis of native cell extracts.
Commun Biol, 7, 2024
7MSI
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TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Descriptor: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Authors:Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
Deposit date:1997-09-17
Release date:1998-10-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
3BOW
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Structure of M-calpain in complex with Calpastatin
Descriptor: CALCIUM ION, Calpain small subunit 1, Calpain-2 catalytic subunit, ...
Authors:Hanna, R.A, Campbell, R.L, Davies, P.L.
Deposit date:2007-12-17
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Calcium-bound structure of calpain and its mechanism of inhibition by calpastatin.
Nature, 456, 2008
3CQT
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N53I V55L MUTANT of FYN SH3 DOMAIN
Descriptor: Proto-oncogene tyrosine-protein kinase Fyn
Authors:Neculai, A.M, Zarrine-Afsar, A, Howell, P.L, Davidson, A, Chan, H.S.
Deposit date:2008-04-03
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Theoretical and experimental demonstration of the importance of specific nonnative interactions in protein folding.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1EDS
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BU of 1eds by Molmil
SOLUTION STRUCTURE OF INTRADISKAL LOOP 1 OF BOVINE RHODOPSIN (RHODOPSIN RESIDUES 92-123)
Descriptor: RHODOPSIN
Authors:Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
Deposit date:2000-01-28
Release date:2000-08-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
1MDW
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BU of 1mdw by Molmil
Crystal Structure of Calcium-Bound Protease Core of Calpain II Reveals the Basis for Intrinsic Inactivation
Descriptor: CALCIUM ION, Calpain II, catalytic subunit
Authors:Moldoveanu, T, Hosfield, C.M, Lim, D, Jia, Z, Davies, P.L.
Deposit date:2002-08-07
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Calpain silencing by a reversible intrinsic mechanism.
Nat.Struct.Biol., 10, 2003
2RI8
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BU of 2ri8 by Molmil
Penicillium citrinum alpha-1,2-mannosidase complex with glycerol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Lobsanov, Y.D, Yoshida, T, Desmet, T, Nerinckx, W, Yip, P, Claeyssens, M, Herscovics, A, Howell, P.L.
Deposit date:2007-10-10
Release date:2008-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Modulation of activity by Arg407: structure of a fungal alpha-1,2-mannosidase in complex with a substrate analogue.
Acta Crystallogr.,Sect.D, 64, 2008
1MJE
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STRUCTURE OF A BRCA2-DSS1-SSDNA COMPLEX
Descriptor: 5'-D(P*TP*TP*TP*TP*TP*T)-3', Deleted in split hand/split foot protein 1, breast cancer 2
Authors:Yang, H, Jeffrey, P.D, Miller, J, Kinnucan, E, Sun, Y, Thoma, N.H, Zheng, N, Chen, P.L, Lee, W.H, Pavletich, N.P.
Deposit date:2002-08-27
Release date:2002-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure.
Science, 297, 2002
1EDW
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BU of 1edw by Molmil
SOLUTION STRUCTURE OF THIRD INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 268-293)
Descriptor: RHODOPSIN
Authors:Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
Deposit date:2000-01-28
Release date:2000-08-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
1EKL
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BU of 1ekl by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 E35K
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-21
Release date:1999-04-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
1MSI
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BU of 1msi by Molmil
STRUCTURE OF ANTIFREEZE GLYCOPROTEIN QAE(HPLC 12)
Descriptor: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
Authors:Jia, Z, Deluca, C.I, Chao, H, Davies, P.L.
Deposit date:1996-10-08
Release date:1997-12-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural basis for the binding of a globular antifreeze protein to ice.
Nature, 384, 1996
1EDX
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SOLUTION STRUCTURE OF AMINO TERMINUS OF BOVINE RHODOPSIN (RESIDUES 1-40)
Descriptor: RHODOPSIN
Authors:Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
Deposit date:2000-01-28
Release date:2000-08-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
6LA9
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349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 (high cryoprotectant)
Descriptor: CALCIUM ION, DNA (349-MER), Histone H1.0, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2019-11-12
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
1EDV
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BU of 1edv by Molmil
SOLUTION STRUCTURE OF 2ND INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 172-205)
Descriptor: RHODOPSIN
Authors:Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
Deposit date:2000-01-28
Release date:2000-08-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
6L9Z
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338 bp di-nucleosome assembled with linker histone H1.X
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (338-MER), ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2019-11-11
Release date:2021-02-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
6LAB
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BU of 6lab by Molmil
169 bp nucleosome, harboring cohesive DNA termini, assembled with linker histone H1.0
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (169-MER), ...
Authors:Adhireksan, Z, Sharma, D, Bao, Q, Lee, P.L, Padavattan, S, Davey, C.A.
Deposit date:2019-11-12
Release date:2021-02-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
6LA2
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343 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0
Descriptor: DNA (343-MER), Histone H1.0, Histone H2A type 1-B/E, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2019-11-11
Release date:2021-02-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
6LER
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BU of 6ler by Molmil
169 bp nucleosome harboring non-identical cohesive DNA termini.
Descriptor: CALCIUM ION, DNA (169-MER), Histone H2A type 1-B/E, ...
Authors:Sharma, D, Adhireksan, Z, Lee, P.L, Davey, C.A.
Deposit date:2019-11-26
Release date:2021-03-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021

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