Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2916 results

7RUE
DownloadVisualize
BU of 7rue by Molmil
DAHP synthase complexed with trifluoropyruvate semicarbazone
Descriptor: (2E)-2-(2-carbamoylhydrazinylidene)-3,3,3-trifluoropropanoic acid, MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, ...
Authors:Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
Deposit date:2021-08-16
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
5MH6
DownloadVisualize
BU of 5mh6 by Molmil
D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-ketohexanoic acid and NAD+ (1.35 A resolution)
Descriptor: 1,2-ETHANEDIOL, 2-Ketohexanoic acid, D-2-hydroxyacid dehydrogenase, ...
Authors:Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
Deposit date:2016-11-23
Release date:2018-06-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
8VKA
DownloadVisualize
BU of 8vka by Molmil
Crystal structure of Plasmodium vivax glycylpeptide N-tetradecanoyltransferase (N-myristoyltransferase, NMT) bound to myristoyl-CoA and inhibitor 9c
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Fenwick, M.K, Staker, B.L, Phan, I.Q, Early, J, Myler, P.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-01-08
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Exploring Subsite Selectivity within Plasmodium vivax N -Myristoyltransferase Using Pyrazole-Derived Inhibitors.
J.Med.Chem., 67, 2024
8VKB
DownloadVisualize
BU of 8vkb by Molmil
Crystal structure of Plasmodium vivax glycylpeptide N-tetradecanoyltransferase (N-myristoyltransferase, NMT) bound to myristoyl-CoA and inhibitor 10b
Descriptor: CHLORIDE ION, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase, ...
Authors:Fenwick, M.K, Staker, B.L, Phan, I.Q, Early, J, Myler, P.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-01-08
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Exploring Subsite Selectivity within Plasmodium vivax N -Myristoyltransferase Using Pyrazole-Derived Inhibitors.
J.Med.Chem., 67, 2024
3GTT
DownloadVisualize
BU of 3gtt by Molmil
Mouse SOD1
Descriptor: Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Seetharaman, S.V, Taylor, A.B, Hart, P.J.
Deposit date:2009-03-28
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mouse SOD1 and human/mouse SOD1 chimeras.
Arch.Biochem.Biophys., 503, 2010
5MER
DownloadVisualize
BU of 5mer by Molmil
Human Leukocyte Antigen A02 presenting ILAKFLHEL
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-2-microglobulin, ...
Authors:Rizkallah, P.J, Lloyd, A, Crowther, M, Cole, D.K, Sewell, A.K.
Deposit date:2016-11-16
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural Mechanism Underpinning Cross-reactivity of a CD8+ T-cell Clone That Recognizes a Peptide Derived from Human Telomerase Reverse Transcriptase.
J. Biol. Chem., 292, 2017
7RYV
DownloadVisualize
BU of 7ryv by Molmil
Anti-HIV neutralizing antibody Ab1573 Fab isolated from sequentially immunized macaques
Descriptor: Ab1573 Fab heavy chain, Ab1573 Fab light chain
Authors:Yang, Z, Bjorkman, P.J.
Deposit date:2021-08-26
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer.
Nat Commun, 13, 2022
7RYU
DownloadVisualize
BU of 7ryu by Molmil
Anti-HIV neutralizing antibody Ab1303 Fab isolated from sequentially immunized mcaques
Descriptor: Ab1303 Fab heavy chain, Ab1303 Fab light chain
Authors:Yang, Z, Bjorkman, P.J.
Deposit date:2021-08-26
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer.
Nat Commun, 13, 2022
3GZQ
DownloadVisualize
BU of 3gzq by Molmil
HUMAN SOD1 A4V Metal-free Variant
Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn]
Authors:Galaleldeen, A, Taylor, A.B, Whitson, L.J, Hart, P.J.
Deposit date:2009-04-07
Release date:2009-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural and biophysical properties of metal-free pathogenic SOD1 mutants A4V and G93A.
Arch.Biochem.Biophys., 492, 2009
7SC1
DownloadVisualize
BU of 7sc1 by Molmil
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, R40-1G8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, R40-1G8 Fab heavy chain, R40-1G8 Fab light chain, ...
Authors:Fan, C, Bjorkman, P.J.
Deposit date:2021-09-26
Release date:2022-02-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Discovery of ultrapotent broadly neutralizing antibodies from SARS-CoV-2 elite neutralizers.
Cell Host Microbe, 30, 2022
3GZP
DownloadVisualize
BU of 3gzp by Molmil
HUMAN SOD1 G93A Metal-free Variant
Descriptor: Superoxide dismutase [Cu-Zn]
Authors:Galaleldeen, A, Taylor, A.B, Whitson, L.J, Hart, P.J.
Deposit date:2009-04-07
Release date:2009-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and biophysical properties of metal-free pathogenic SOD1 mutants A4V and G93A.
Arch.Biochem.Biophys., 492, 2009
3H7P
DownloadVisualize
BU of 3h7p by Molmil
Crystal structure of K63-linked di-ubiquitin
Descriptor: CADMIUM ION, Ubiquitin
Authors:Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J.
Deposit date:2009-04-28
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture.
Proteins, 77, 2009
5MTP
DownloadVisualize
BU of 5mtp by Molmil
Crystal structure of M. tuberculosis InhA inhibited by PT514
Descriptor: 2-(2-methylphenoxy)-5-[(4-phenyl-1H-1,2,3-triazol-1-yl)methyl]phenol, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
Authors:Eltschkner, S, Pschibul, A, Spagnuolo, L.A, Yu, W, Tonge, P.J, Kisker, C.
Deposit date:2017-01-10
Release date:2017-02-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based InhA Inhibitors.
J. Am. Chem. Soc., 139, 2017
7SFQ
DownloadVisualize
BU of 7sfq by Molmil
EmrE S64V Mutant Bound to tetra(4-fluorophenyl)phosphonium at pH 8.0
Descriptor: Multidrug transporter EmrE, tetrakis(4-fluorophenyl)phosphanium
Authors:Shcherbakov, A.A, Spreacker, P.J, Dregni, A.J, Henzler-Wildman, K.A, Hong, M.
Deposit date:2021-10-04
Release date:2022-03-02
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:High-pH structure of EmrE reveals the mechanism of proton-coupled substrate transport.
Nat Commun, 13, 2022
5MU8
DownloadVisualize
BU of 5mu8 by Molmil
HUMAN TNF-ALPHA IN COMPLEX WITH JNJ525
Descriptor: Tumor necrosis factor, ~{N}4-(phenylmethyl)-~{N}4-[2-[3-(2-piperazin-1-ylpyrimidin-5-yl)phenyl]phenyl]pyrimidine-2,4-diamine
Authors:Blevitt, J.M, Hack, M.D, Herman, K.L, Jackson, P.F, Krawczuk, P.J, Lebsack, A.D, Liu, A.X, Mirzadegan, T, Nelen, M.I, Patrick, A.P, Steinbacher, S, Milla, M.E, Lumb, K.J.
Deposit date:2017-01-12
Release date:2017-03-29
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of Small-Molecule Aggregate Induced Inhibition of a Protein-Protein Interaction.
J. Med. Chem., 60, 2017
1U53
DownloadVisualize
BU of 1u53 by Molmil
Novel X-Ray Structure of Na-ASP-2, a PR-1 protein from the nematode parasite Necator americanus and a vaccine antigen for human hookworm infection
Descriptor: secreted protein ASP-2
Authors:Asojo, O.A, Goud, G, Dhar, K, Loukas, A, Zhan, B, Deumic, V, Liu, S, Borgstahl, G.E.O, Hotez, P.J.
Deposit date:2004-07-26
Release date:2005-02-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:X-ray structure of Na-ASP-2, a pathogenesis-related-1 protein from the nematode parasite, Necator americanus, and a vaccine antigen for human hookworm infection.
J.Mol.Biol., 346, 2005
3H2P
DownloadVisualize
BU of 3h2p by Molmil
Human SOD1 D124V Variant
Descriptor: ACETYL GROUP, MALONATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Seetharaman, S.V, Winkler, D.D, Taylor, A.B, Cao, X, Whitson, L.J, Doucette, P.A, Valentine, J.S, Carroll, M.C, Culotta, V.C, Hart, P.J.
Deposit date:2009-04-14
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of Pathogenic SOD1 Mutants H80R and D124V: Disrupted Zinc-binding and Compromised Post-translational Modification by the Copper Chaperone CCS
To be Published
3H7U
DownloadVisualize
BU of 3h7u by Molmil
Crystal structure of the plant stress-response enzyme AKR4C9
Descriptor: ACETATE ION, Aldo-keto reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:White, S.A, Simpson, P.J, Ride, J.P.
Deposit date:2009-04-28
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Characterization of two novel aldo-keto reductases from Arabidopsis: expression patterns, broad substrate specificity, and an open active-site structure suggest a role in toxicant metabolism following stress.
J.Mol.Biol., 392, 2009
7KNR
DownloadVisualize
BU of 7knr by Molmil
The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988558
Descriptor: 2-(2,6-difluorophenyl)-5-hydroxy-N-[2-(4-hydroxy-3-methoxyphenyl)ethyl]-6-oxo-3,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, P.J, Jayaraman, S, White, S.W.
Deposit date:2020-11-05
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988558
To Be Published
1S44
DownloadVisualize
BU of 1s44 by Molmil
The structure and refinement of apocrustacyanin C2 to 1.6A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Crustacyanin A1 subunit, GLYCEROL, ...
Authors:Habash, J, Helliwell, J.R, Raftery, J, Cianci, M, Rizkallah, P.J, Chayen, N.E, Nneji, G.A, Zagalsky, P.F.
Deposit date:2004-01-15
Release date:2004-04-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure and refinement of apocrustacyanin C2 to 1.3 A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Acta Crystallogr.,Sect.D, 60, 2004
7KNY
DownloadVisualize
BU of 7kny by Molmil
The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988528
Descriptor: 2-(2-fluorophenyl)-5-hydroxy-N-[2-(4-hydroxy-3-methoxyphenyl)ethyl]-6-oxo-3,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, P.J, Jayaraman, S, White, S.W.
Deposit date:2020-11-06
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988528
To Be Published
7KOP
DownloadVisualize
BU of 7kop by Molmil
The crystal structure of the 2009/H1N1/California PA endonuclease I38T mutant in complex with SJ000988539
Descriptor: 2-(2-fluorophenyl)-5-hydroxy-N-[2-(2-methoxypyridin-4-yl)ethyl]-6-oxo-1,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, P.J, Seetharaman, J, White, S.W.
Deposit date:2020-11-09
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The crystal structure of the 2009/H1N1/California PA endonuclease I38T mutant in complex with SJ000988539
To Be Published
1WSX
DownloadVisualize
BU of 1wsx by Molmil
Solution structure of MCL-1
Descriptor: myeloid cell leukemia sequence 1
Authors:Day, C.L, Chen, L, Richardson, S.J, Harrison, P.J, Huang, D.C, Hinds, M.G.
Deposit date:2004-11-12
Release date:2004-11-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of Prosurvival Mcl-1 and Characterization of Its Binding by Proapoptotic BH3-only Ligands
J.Biol.Chem., 280, 2005
5N6B
DownloadVisualize
BU of 5n6b by Molmil
Human Leukocyte Antigen Class I A02 Carrying LLWNPGMAV
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Bulek, A.M, Bovay, A.
Deposit date:2017-02-14
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:T cell receptor alpha variable 12-2 bias in the immunodominant response to Yellow fever virus.
Eur. J. Immunol., 48, 2018
1S73
DownloadVisualize
BU of 1s73 by Molmil
Crystal Structure of Mesopone Cytochrome c Peroxidase (R-isomer) [MpCcP-R]
Descriptor: Cytochrome c peroxidase, mitochondrial, FE-(4-MESOPORPHYRINONE)-R-ISOMER
Authors:Bhaskar, B, Immoos, C.E, Sulc, F, Choen, M.S, Farmer, P.J, Poulos, T.L.
Deposit date:2004-01-28
Release date:2005-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal structures of reduced, resting and NO-bound states of mesopone cytochorme c peroxidase (MpCcP) (R-isomer)
To be Published

225158

건을2024-09-18부터공개중

PDB statisticsPDBj update infoContact PDBjnumon