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PDB: 45910 results

1K5E
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BU of 1k5e by Molmil
Solution Structure of R-styrene Adduct in the Ras61 Sequence
Descriptor: 5'-D(*CP*GP*GP*AP*CP*(ABR)P*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'
Authors:Hennard, C, Finneman, J, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:2001-10-10
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The nonmutagenic (R)- and (S)-beta-(N(6)-adenyl)styrene oxide adducts are oriented in the major groove and show little perturbation to DNA structure.
Biochemistry, 40, 2001
7BNH
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BU of 7bnh by Molmil
Complex structure at atomic resolution of SH3b domain with benzoic acid
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BENZOIC ACID, GLYCEROL, ...
Authors:Malecki, P.H, Sabala, I.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Complex structure of SH3b domain with benzoic acid
To Be Published
2NUU
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BU of 2nuu by Molmil
Regulating the Escherichia coli ammonia channel: the crystal structure of the AmtB-GlnK complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ammonia channel, Nitrogen regulatory protein P-II 2
Authors:Conroy, M.J, Durand, A, Lupo, D, Li, X.-D, Bullough, P.A, Winkler, F.K, Merrick, M.
Deposit date:2006-11-09
Release date:2006-11-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the Escherichia coli AmtB-GlnK complex reveals how GlnK regulates the ammonia channel
Proc.Natl.Acad.Sci.Usa, 104, 2007
2C6Q
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BU of 2c6q by Molmil
Crystal structure of human guanosine monophosphate reductase 2 GMPR2 in complex with IMP and NADPH
Descriptor: GMP REDUCTASE 2, INOSINIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kursula, P, Stenmark, P, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Graslund, S, Hammarstrom, M, Hallberg, B.M, Kotenyova, T, Nilsson-Ehle, P, Ogg, D, Persson, C, Sagemark, J, Schuler, H, Sundstrom, M, Thorsell, A, Weigelt, J, Nordlund, P.
Deposit date:2005-11-11
Release date:2005-11-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cofactor Mobility Determines Reaction Outcome in the Impdh and Gmpr (Beta-Alpha)(8) Barrel Enzymes.
Nat.Chem.Biol., 7, 2011
6TD1
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BU of 6td1 by Molmil
Crystal structure of VNRX-5133 (taniborbactam) bound to KPC-2
Descriptor: (3~{R})-3-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, ...
Authors:Tooke, C.L, Hinchliffe, P, Spencer, J.
Deposit date:2019-11-07
Release date:2020-01-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Cyclic boronates as versatile scaffolds for KPC-2 beta-lactamase inhibition.
Rsc Med Chem, 11, 2020
6GAR
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BU of 6gar by Molmil
Crystal structure of oxidised ferredoxin/flavodoxin NADP+ oxidoreductase 1 (FNR1) from Bacillus cereus
Descriptor: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, ...
Authors:Skramo, S, Gudim, I, Hersleth, H.-P.
Deposit date:2018-04-12
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Characterization of Different Flavodoxin Reductase-Flavodoxin (FNR-Fld) Interactions Reveals an Efficient FNR-Fld Redox Pair and Identifies a Novel FNR Subclass.
Biochemistry, 57, 2018
7LJL
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BU of 7ljl by Molmil
Structure of the Enterobacter cloacae CD-NTase CdnD in complex with ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase, ...
Authors:Govande, A, Lowey, B, Eaglesham, J.B, Whiteley, A.W, Kranzusch, P.J.
Deposit date:2021-01-29
Release date:2021-06-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense.
Cell Rep, 35, 2021
2NWR
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BU of 2nwr by Molmil
Crystal structure of C11N mutant of KDO8P Synthase in complex with PEP
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-16
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2O8C
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BU of 2o8c by Molmil
human MutSalpha (MSH2/MSH6) bound to ADP and an O6-methyl-guanine T mispair
Descriptor: 5'-D(*CP*CP*TP*AP*GP*CP*GP*TP*GP*CP*GP*GP*TP*TP*C)-3', 5'-D(*GP*AP*AP*CP*CP*GP*CP*(6OG)P*CP*GP*CP*TP*AP*GP*G)-3', ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Warren, J.J, Pohlhaus, T.J, Changela, A, Modrich, P.L, Beese, L.S.
Deposit date:2006-12-12
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Structure of the Human MutSalpha DNA Lesion Recognition Complex.
Mol.Cell, 26, 2007
6ZVN
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BU of 6zvn by Molmil
Botulinum neurotoxin B2 binding domain in complex with human synaptotagmin I
Descriptor: Neurotoxin, Synaptotagmin-1
Authors:Davies, J.R, Masuyer, G, Stenmark, P.
Deposit date:2020-07-25
Release date:2020-10-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Biochemical Characterization of Botulinum Neurotoxin Subtype B2 Binding to Its Receptors.
Toxins, 12, 2020
6C72
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BU of 6c72 by Molmil
Crystal structure of a tailspike protein gp49 from Acinetobacter baumannii bacteriophage Fri1, a capsular polysaccharide depolymerase
Descriptor: Particle-associated glycoside hydrolase, ZINC ION
Authors:Buth, S.A, Garcon, A, Popova, A.V, Shneider, M.M, Leiman, P.G.
Deposit date:2018-01-19
Release date:2019-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Exopolysaccharide degrading enzymes - specificity determinants of Acinetobacter baumannii phages
To Be Published
7LJN
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BU of 7ljn by Molmil
Structure of the Bradyrhizobium diazoefficiens CD-NTase CdnG in complex with GTP
Descriptor: CD-NTase, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Govande, A, Lowey, B, Eaglesham, J.B, Whiteley, A.T, Kranzusch, P.J.
Deposit date:2021-01-29
Release date:2021-06-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense.
Cell Rep, 35, 2021
6ZYP
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BU of 6zyp by Molmil
Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine L-anti-1b
Descriptor: (2~{S},4~{R})-2-ethoxycarbonyl-5,5-dimethyl-2-(sulfanylmethyl)-1,3-thiazolidine-4-carboxylic acid, Metallo-beta-lactamase type 2, SULFATE ION, ...
Authors:Hinchliffe, P, Spencer, J.
Deposit date:2020-08-02
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:2-Mercaptomethyl-thiazolidines use conserved aromatic-S interactions to achieve broad-range inhibition of metallo-beta-lactamases.
Chem Sci, 12, 2021
2C7N
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BU of 2c7n by Molmil
Human Rabex-5 residues 1-74 in complex with Ubiquitin
Descriptor: RAB GUANINE NUCLEOTIDE EXCHANGE FACTOR 1, UBIQUITIN, ZINC ION
Authors:Penengo, L, Mapelli, M, Murachelli, A.G, Confalioneri, S, Magri, L, Musacchio, A, Di Fiore, P.P, Polo, S, Schneider, T.R.
Deposit date:2005-11-25
Release date:2006-02-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Ubiquitin Binding Domains of Rabex-5 Reveals Two Modes of Interaction with Ubiquitin.
Cell(Cambridge,Mass.), 124, 2006
3PY4
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BU of 3py4 by Molmil
Crystal structure of bovine lactoperoxidase in complex with paracetamol at 2.4A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pandey, N, Sing, R.P, Singh, A.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-12-11
Release date:2011-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of bovine lactoperoxidase in complex with paracetamol at 2.4A resolution
To be published
6TGD
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BU of 6tgd by Molmil
Crystal structure of NDM-1 in complex with triazole-based inhibitor OP31
Descriptor: 4-[[(2~{S})-oxolan-2-yl]methyl]-3-pyridin-3-yl-1~{H}-1,2,4-triazole-5-thione, CALCIUM ION, Metallo-beta-lactamase NDM-1, ...
Authors:Maso, L, Spirakis, F, Santucci, M, Simon, C, Docquier, J.D, Cruciani, G, Costi, M.P, Tondi, D, Cendron, L.
Deposit date:2019-11-15
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Virtual screening identifies broad-spectrum beta-lactamase inhibitors with activity on clinically relevant serine- and metallo-carbapenemases.
Sci Rep, 10, 2020
7LQF
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BU of 7lqf by Molmil
Cryo-EM of KFE8 ribbon filament
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
1NOI
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BU of 1noi by Molmil
COMPLEX OF GLYCOGEN PHOSPHORYLASE WITH A TRANSITION STATE ANALOGUE NOJIRIMYCIN TETRAZOLE AND PHOSPHATE IN THE T AND R STATES
Descriptor: GLYCOGEN PHOSPHORYLASE, NOJIRIMYCINE TETRAZOLE, PHOSPHATE ION, ...
Authors:Johnson, L.N, Mitchell, E.P.
Deposit date:1996-03-12
Release date:1996-08-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ternary complex crystal structures of glycogen phosphorylase with the transition state analogue nojirimycin tetrazole and phosphate in the T and R states.
Biochemistry, 35, 1996
7LQH
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BU of 7lqh by Molmil
Cryo-EM of KFE8 thinner nanotube (class 2, 2-sub-1)
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
7F84
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BU of 7f84 by Molmil
Crystal structure of CRISPR-associated Cas2c of Leptospira interrogans
Descriptor: CRISPR-associated endoribonuclease Cas2, GLYCEROL
Authors:Gogoi, P, Anand, V, Prabhakaran, H.S, Kumar, M, Kanaujia, S.P.
Deposit date:2021-07-01
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional characterization of Cas2 of CRISPR-Cas subtype I-C lacking the CRISPR component.
Front Mol Biosci, 9, 2022
7LQG
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BU of 7lqg by Molmil
Cryo-EM of the KFE8 thinner nanotube (class 1, C2)
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
3KM2
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BU of 3km2 by Molmil
As-isolated TOMATO CHLOROPLAST SUPEROXIDE DISMUTASE
Descriptor: Superoxide dismutase [Cu-Zn], chloroplastic, ZINC ION
Authors:Galaleldeen, A, Taylor, A.B, Hart, P.J.
Deposit date:2009-11-09
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Biophysical properties of tomato chloroplast sod
To be Published
7LQE
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BU of 7lqe by Molmil
Cryo-EM of 1-protofilament of the KFE8 thinner nanotube
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
6ZYQ
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BU of 6zyq by Molmil
Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine D-syn-1b
Descriptor: (2~{S},4~{S})-2-ethoxycarbonyl-5,5-dimethyl-2-(sulfanylmethyl)-1,3-thiazolidine-4-carboxylic acid, Metallo-beta-lactamase type 2, SULFATE ION, ...
Authors:Hinchliffe, P, Spencer, J.
Deposit date:2020-08-02
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:2-Mercaptomethyl-thiazolidines use conserved aromatic-S interactions to achieve broad-range inhibition of metallo-beta-lactamases.
Chem Sci, 12, 2021
5TQ6
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BU of 5tq6 by Molmil
Design and Synthesis of a pan-JAK Kinase Inhibitor Clinical Candidate (PF-06263276) Suitable for Inhaled and Topical Delivery for the Treatment of Inflammatory Diseases of the Lungs and Skin
Descriptor: Tyrosine-protein kinase JAK2, {(3R,4R)-4-methyl-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}(pyrrolidin-1-yl)methanone
Authors:Chrencik, J, Jones, P.
Deposit date:2016-10-23
Release date:2017-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Design and Synthesis of a Pan-Janus Kinase Inhibitor Clinical Candidate (PF-06263276) Suitable for Inhaled and Topical Delivery for the Treatment of Inflammatory Diseases of the Lungs and Skin.
J. Med. Chem., 60, 2017

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