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PDB: 45955 results

5OIV
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Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH) D43A variant in complex with serine and glycerol
Descriptor: GLYCEROL, GLYCINE, Hydrolase, ...
Authors:Cereija, T.B, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2017-07-19
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation.
Iucrj, 6, 2019
1SXK
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Crystal Structure of a complex formed between phospholipase A2 and a non-specific anti-inflammatory amino salicylic acid at 1.2 A resolution
Descriptor: 2-HYDROXY-4-AMINOBENZOIC ACID, Phospholipase A2 VRV-PL-VIIIa, SULFATE ION
Authors:Singh, N, Bilgrami, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2004-03-31
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Crystal Structure of a complex formed between phospholipase A2 and a non-specific anti-inflammatory amino salicylic acid at 1.2 A resolution
To be Published
4NMH
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BU of 4nmh by Molmil
11-beta-HSD1 in complex with a 3,3-Di-methyl-azetidin-2-one
Descriptor: (4S)-4-(2-methoxyphenyl)-3,3-dimethyl-1-[3-(methylsulfonyl)phenyl]azetidin-2-one, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:McCoull, W, Augustin, M, Blake, C, Ertan, A, Kilgour, E.K, Krapp, S, Moore, J.E, Newcombe, N.J, Packer, M.J, Rees, A, Revill, J, Scott, J.S, Selmi, N, Gerhardt, S, Ogg, D.J, Steinbacher, S, Whittamore, P.R.O.
Deposit date:2013-11-15
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification and optimisation of 3,3-dimethyl-azetidin-2-ones as potent and selective inhibitors of 11 beta-hydroxysteroid dehydrogenase type 1 (11-beta-HSD1)
TO BE PUBLISHED
1SYY
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BU of 1syy by Molmil
Crystal structure of the R2 subunit of ribonucleotide reductase from Chlamydia trachomatis
Descriptor: FE (III) ION, LEAD (II) ION, Ribonucleoside-diphosphate reductase beta chain
Authors:Hogbom, M, Stenmark, P, Voevodskaya, N, McClarty, G, Graslund, A, Nordlund, P.
Deposit date:2004-04-02
Release date:2004-07-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The radical site in chlamydial ribonucleotide reductase defines a new R2 subclass.
Science, 305, 2004
7LGO
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BU of 7lgo by Molmil
Crystal structure of the nucleic acid binding domain (NAB) of Nsp3 from SARS-CoV-2
Descriptor: Non-structural protein 3
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-01-20
Release date:2021-01-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of the nucleic acid binding domain (NAB) of Nsp3 from SARS-CoV-2
To Be Published
4NO8
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yCP in complex with Z-Leu-Leu-Leu-ketoamide
Descriptor: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-2-hydroxy-5-methyl-1-oxo-1-(phenylamino)hexan-3-yl]-L-leucinamide, Probable proteasome subunit alpha type-7, ...
Authors:Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
Deposit date:2013-11-19
Release date:2014-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
7YF7
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BU of 7yf7 by Molmil
NMR solution structures of the DNA minidumbbell formed by two ATTTT repeats
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*AP*TP*TP*TP*T)-3'), SODIUM ION
Authors:Wan, L, Li, J, Guo, P.
Deposit date:2022-07-07
Release date:2023-01-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Nuclear Magnetic Resonance Structures of ATTTT and ATTTC Pentanucleotide Repeats Associated with SCA37 and FAMEs.
Acs Chem Neurosci, 14, 2023
1JWC
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NMR SOLUTION STRUCTURE OF THE RNA HAIRPIN BINDING SITE FOR THE HISTONE STEM-LOOP BINDING PROTEIN
Descriptor: 5'-R(*GP*GP*CP*CP*AP*AP*AP*GP*GP*CP*CP*CP*UP*UP*UP*UP*CP*AP*GP*GP*GP*CP*CP*AP*CP*CP*CP*A)-3'
Authors:Dejong, E.S, Marzluff, W.F, Nikonowicz, E.P.
Deposit date:2001-09-03
Release date:2002-03-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure and dynamics of the RNA-binding site for the histone mRNA stem-loop binding protein.
RNA, 8, 2002
4NSK
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BU of 4nsk by Molmil
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 ALTERED PEPTIDE ligand V3P
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ...
Authors:Allerbring, E.B, Duru, A.D, Uchtenhagen, H, Mazumdar, P.A, Badia-Martinez, D, Madhurantakam, C, Sandalova, T, Nygren, P, Achour, A.
Deposit date:2013-11-28
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 ALTERED PEPTIDE ligand V3P
TO BE PUBLISHED
2PTS
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BU of 2pts by Molmil
Crystal structure of wild type Escherichia coli adenylosuccinate lyase
Descriptor: Adenylosuccinate lyase
Authors:Tsai, M, Howell, P.L.
Deposit date:2007-05-08
Release date:2007-07-03
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate and Product Complexes of Escherichia coli Adenylosuccinate Lyase Provide New Insights into the Enzymatic Mechanism.
J.Mol.Biol., 370, 2007
7LKW
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1.65 A resolution structure of SARS-CoV-2 3CL protease in complex with inhibitor 3d (deuterated analog of inhibitor 3c)
Descriptor: (1R,2S)-2-((S)-2-(((((1R,3S,5S)-bicyclo[3.3.1]non-6-en-3-yl)methoxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid, (1S,2S)-2-((S)-2-(((((1R,3S,5S)-bicyclo[3.3.1]non-6-en-3-yl)methoxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid, 3C-like proteinase, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Chamandi, S.D, Rathnayake, A.D, Nguyen, H.N, Baird, M.A, Kim, Y, Shadipeni, N, Chang, K.O, Groutas, W.C.
Deposit date:2021-02-02
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Guided Design of Conformationally Constrained Cyclohexane Inhibitors of Severe Acute Respiratory Syndrome Coronavirus-2 3CL Protease.
J.Med.Chem., 64, 2021
1JWS
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BU of 1jws by Molmil
Crystal Structure of the Complex of the MHC Class II Molecule HLA-DR1 (HA peptide 306-318) with the Superantigen SEC3 Variant 3B1
Descriptor: Enterotoxin type C-3, HA peptide, HLA class II histocompatibility antigen, ...
Authors:Sundberg, E.J, Andersen, P.S, Schlievert, P.M, Karjalainen, K, Mariuzza, R.A.
Deposit date:2001-09-05
Release date:2003-07-08
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural, energetic, and functional analysis of a protein-protein interface at distinct stages of affinity maturation
Structure, 11, 2003
4O0O
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BU of 4o0o by Molmil
Crystal structure of the complex of type 1 Ribosome inactivating protein from Momordica balsamina with 5-fluorouracil at 2.59 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-FLUOROURACIL, GLYCEROL, ...
Authors:Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-12-14
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of the complex of type 1 Ribosome inactivating protein from Momordica balsamina with 5-fluorouracil at 2.59 A resolution
To be Published
2JPK
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Lactococcin G-b in DPC
Descriptor: Bacteriocin lactococcin-G subunit beta
Authors:Rogne, P, Fimland, G, Nissen-Meyer, J, Kristiansen, P.E.
Deposit date:2007-05-15
Release date:2008-02-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Three-dimensional structure of the two peptides that constitute the two-peptide bacteriocin lactococcin G
Biochim.Biophys.Acta, 1784, 2008
1T5Q
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Solution Structure of GIP(1-30)amide in TFE/Water
Descriptor: Gastric inhibitory polypeptide
Authors:Alana, I, Hewage, C.M, Malthouse, J.P.G, Parker, J.C, Gault, V.A, O'Harte, F.P.M.
Deposit date:2004-05-05
Release date:2004-11-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the glucose-dependent insulinotropic polypeptide fragment, GIP(1-30)amide.
Biochem.Biophys.Res.Commun., 325, 2004
2JPL
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BU of 2jpl by Molmil
Lactococcin G-a in TFE
Descriptor: Bacteriocin lactococcin-G subunit alpha
Authors:Rogne, P, Fimland, G, Nissen-Meyer, J, Kristiansen, P.E.
Deposit date:2007-05-15
Release date:2008-02-19
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Three-dimensional structure of the two peptides that constitute the two-peptide bacteriocin lactococcin G
Biochim.Biophys.Acta, 1784, 2008
4JT2
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BU of 4jt2 by Molmil
Structure of Clostridium thermocellum polynucleotide kinase bound to CTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase
Authors:Das, U, Wang, L.K, Smith, P, Shuman, S.
Deposit date:2013-03-22
Release date:2013-08-28
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system.
Biochemistry, 52, 2013
1T4W
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BU of 1t4w by Molmil
Structural Differences in the DNA Binding Domains of Human p53 and its C. elegans Ortholog Cep-1: Structure of C. elegans Cep-1
Descriptor: C.Elegans p53 tumor suppressor-like transcription factor, ZINC ION
Authors:Huyen, Y, Jeffrey, P.D, Derry, W.B, Rothman, J.H, Pavletich, N.P, Stavridi, E.S, Halazonetis, T.D.
Deposit date:2004-04-30
Release date:2004-07-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Differences in the DNA Binding Domains of Human p53 and Its C. elegans Ortholog Cep-1.
Structure, 12, 2004
4EMR
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BU of 4emr by Molmil
Crystal Structure determination of type1 ribosome inactivating protein complexed with 7-methylguanosine-triphosphate at 1.75A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, rRNA N-glycosidase
Authors:Kumar, M, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-04-12
Release date:2012-05-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:First structural evidence of sequestration of mRNA cap structures by type 1 ribosome inactivating protein from Momordica balsamina.
Proteins, 81, 2013
1Q24
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BU of 1q24 by Molmil
PKA double mutant model of PKB in complex with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, cAMP-dependent Protein Kinase Inhibitor, ...
Authors:Gassel, M, Breitenlechner, C.B, Rueger, P, Jucknischke, U, Schneider, T, Huber, R, Bossemeyer, D, Engh, R.A.
Deposit date:2003-07-23
Release date:2003-08-19
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mutants of protein kinase A that mimic the ATP-binding site of protein kinase B (AKT)
J.Mol.Biol., 329, 2003
4ENU
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BU of 4enu by Molmil
Structure of the S234D variant of E. coli KatE
Descriptor: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Catalase HPII
Authors:Loewen, P.C, Jha, V.
Deposit date:2012-04-13
Release date:2012-05-02
Last modified:2013-02-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Influence of main channel structure on H(2)O(2) access to the heme cavity of catalase KatE of Escherichia coli.
Arch.Biochem.Biophys., 526, 2012
1Q52
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Crystal Structure of Mycobacterium tuberculosis MenB, a Key Enzyme in Vitamin K2 Biosynthesis
Descriptor: menB
Authors:Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-08-05
Release date:2004-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003
3BCX
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BU of 3bcx by Molmil
E1 Dehydrase
Descriptor: BENZAMIDINE, CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase, FE (III) ION
Authors:Tsai, S.-C, Smith, P.
Deposit date:2007-11-13
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:E1 Dehydrase.
To be Published
1TC2
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BU of 1tc2 by Molmil
TERNARY SUBSTRATE COMPLEX OF THE HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE FROM TRYPANOSOMA CRUZI
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 7-HYDROXY-PYRAZOLO[4,3-D]PYRIMIDINE, MAGNESIUM ION, ...
Authors:Focia, P.J, Craig III, S.P, Eakin, A.E.
Deposit date:1998-11-04
Release date:2000-03-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Approaching the transition state in the crystal structure of a phosphoribosyltransferase.
Biochemistry, 37, 1998
4ENR
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Structure of E530I variant E. coli KatE
Descriptor: Catalase HPII, PROTOPORPHYRIN IX CONTAINING FE
Authors:Loewen, P.C, Jha, V.
Deposit date:2012-04-13
Release date:2012-05-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Influence of main channel structure on H(2)O(2) access to the heme cavity of catalase KatE of Escherichia coli.
Arch.Biochem.Biophys., 526, 2012

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