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PDB: 46375 results

1U8H
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BU of 1u8h by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ALDKWAS
Descriptor: ANTIBODY 2F5 (HEAVY CHAIN), ANTIBODY 2F5 (LIGHT CHAIN), GP41 PEPTIDE
Authors:Bryson, S, Julien, J.-P, Hynes, R.C, Pai, E.F.
Deposit date:2004-08-06
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications
J.Virol., 83, 2009
4XS1
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Salmonella typhimurium AhpC T43V mutant
Descriptor: Alkyl hydroperoxide reductase subunit C, CHLORIDE ION, POTASSIUM ION, ...
Authors:Perkins, A, Nelson, K, Parsonage, D, Poole, L, Karplus, P.A.
Deposit date:2015-01-21
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Experimentally Dissecting the Origins of Peroxiredoxin Catalysis.
Antioxid.Redox Signal., 28, 2018
4BV7
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Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.
Descriptor: 3-(4-piperidyl)propanoic acid, ACETATE ION, APOLIPOPROTEIN(A)
Authors:Sandmark, J, Althage, M, Andersson, G.M.K, Antonsson, T, Blaho, S, Bodin, C, Bostrom, J, Chen, Y, Dahlen, A, Eriksson, P.O, Evertsson, E, Fex, T, Fjellstrom, O, Gustafsson, D, Hallberg, C, Hicks, R, Jarkvist, E, Johansson, C, Kalies, I, Kang, D, Svalstedt Karlsson, B, Kartberg, F, Legnehed, A, Lindqvist, A.M, Martinsson, S.A, Moberg, A, Petersson, A.U, Ridderstrom, M, Thelin, A, Tigerstrom, A, Vinblad, J, Xu, B, Knecht, W.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)
To be Published
2KFH
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BU of 2kfh by Molmil
Structure of the C-terminal domain of EHD1 with FNYESTGPFTAK
Descriptor: CALCIUM ION, EH domain-containing protein 1, Rab11-FIP2 GPF peptide FNYESTGPFTAK
Authors:Kieken, F, Jovic, M, Tonelli, M, Naslavsky, N, Caplan, S, Sorgen, P.
Deposit date:2009-02-20
Release date:2009-12-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into the interaction of proteins containing NPF, DPF, and GPF motifs with the C-terminal EH-domain of EHD1.
Protein Sci., 18, 2009
5NP8
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BU of 5np8 by Molmil
PGK1 in complex with CRT0063465 (3-[2-(4-bromophenyl)-5,7-dimethyl-pyrazolo[1,5-a]pyrimidin-6-yl]propanoic acid)
Descriptor: 1,2-ETHANEDIOL, 3-PHOSPHOGLYCERIC ACID, 3-[2-(4-bromophenyl)-5,7-dimethyl-pyrazolo[1,5-a]pyrimidin-6-yl]propanoic acid, ...
Authors:Turnbull, A.P, Bilsland, A.E, Liu, Y, Sumpton, D, Stevenson, K, Cairney, C.J, Roffey, J, Jenkinson, D, Keith, W.N.
Deposit date:2017-04-13
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Novel Pyrazolopyrimidine Ligand of Human PGK1 and Stress Sensor DJ1 Modulates the Shelterin Complex and Telomere Length Regulation.
Neoplasia, 21, 2019
4BMC
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BU of 4bmc by Molmil
Crystal structure of s.pombe Rad4 BRCT1,2
Descriptor: CHLORIDE ION, S-M CHECKPOINT CONTROL PROTEIN RAD4
Authors:Meng, Q, Rappas, M, Wardlaw, C.P, Garcia, V, Carr, A.M, Oliver, A.W, Du, L.L, Pearl, L.H.
Deposit date:2013-05-07
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Phosphorylation-Dependent Assembly and Coordination of the DNA Damage Checkpoint Apparatus by Rad4(Topbp1.).
Mol.Cell, 51, 2013
3F2F
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BU of 3f2f by Molmil
Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system
Descriptor: Alkylmercury lyase, BROMIDE ION, MERCURY (II) ION
Authors:Lafrance-Vanasse, J, Lefebvre, M, Di Lello, P, Sygusch, J, Omichinski, J.G.
Deposit date:2008-10-29
Release date:2008-11-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structures of the Organomercurial Lyase MerB in Its Free and Mercury-bound Forms: INSIGHTS INTO THE MECHANISM OF METHYLMERCURY DEGRADATION
J.Biol.Chem., 284, 2009
4BVD
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BU of 4bvd by Molmil
Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.
Descriptor: 5-chloro-2-fluoro-N-[1-(4-piperidyl)pyrazol-4-yl]benzenesulfonamide, APOLIPOPROTEIN(A), CHLORIDE ION
Authors:Sandmark, J, Althage, M, Andersson, G.M.K, Antonsson, T, Blaho, S, Bodin, C, Bostrom, J, Chen, Y, Dahlen, A, Eriksson, P.O, Evertsson, E, Fex, T, Fjellstrom, O, Gustafsson, D, Hallberg, C, Hicks, R, Jarkvist, E, Johansson, C, Kalies, I, Kang, D, Svalstedt Karlsson, B, Kartberg, F, Legnehed, A, Lindqvist, A.M, Martinsson, S.A, Moberg, A, Petersson, A.U, Ridderstrom, M, Thelin, A, Tigerstrom, A, Vinblad, J, Xu, B, Knecht, W.
Deposit date:2013-06-25
Release date:2014-07-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)
To be Published
4BVN
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BU of 4bvn by Molmil
Ultra-thermostable beta1-adrenoceptor with cyanopindolol bound
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, ...
Authors:Miller, J, Nehme, R, Warne, T, Edwards, P.C, Leslie, A.G.W, Schertler, G, Tate, C.G.
Deposit date:2013-06-26
Release date:2014-04-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The 2.1 A Resolution Structure of Cyanopindolol-Bound Beta1- Adrenoceptor Identifies an Intramembrane Na+ Ion that Stabilises the Ligand-Free Receptor.
Plos One, 9, 2014
4BW8
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BU of 4bw8 by Molmil
Calmodulin with small bend in central helix
Descriptor: CALCIUM ION, CALMODULIN
Authors:Kursula, P.
Deposit date:2013-06-30
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Snapshots of Initial Steps in the Collapse of the Calmodulin Central Helix
Acta Crystallogr.,Sect.D, 70, 2014
1U9R
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BU of 1u9r by Molmil
Crystal Structure of Staphylococcal Nuclease mutant V66E/P117G/H124L/S128A at Room Temperature
Descriptor: Thermonuclease
Authors:Denisov, V.P, Schlessman, J.L, Garcia-Moreno, B.E, Halle, B.
Deposit date:2004-08-10
Release date:2004-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Stabilization of internal charges in a protein: water penetration or conformational change?
Biophys.J., 87, 2004
5NHQ
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BU of 5nhq by Molmil
Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein
Descriptor: Agnoprotein
Authors:Coric, P, Saribas, A.S, Abou-Gharbia, M, Childers, W, Condra, J, White, M.K, Safak, M, Bouaziz, S.
Deposit date:2017-03-22
Release date:2017-04-26
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein.
J. Cell. Biochem., 118, 2017
5N6R
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BU of 5n6r by Molmil
Solution structure of the Dbl-homology domain of Bcr-Abl
Descriptor: Breakpoint cluster region protein
Authors:Reckel, S, Lohr, F, Buchner, L, Guntert, P, Dotsch, V, Hantschel, O.
Deposit date:2017-02-16
Release date:2017-12-27
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase.
Nat Commun, 8, 2017
1TV2
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BU of 1tv2 by Molmil
Crystal structure of the hydroxylamine MtmB complex
Descriptor: 5-HYDROXYAMINO-3-METHYL-PYRROLIDINE-2-CARBOXYLIC ACID, Monomethylamine methyltransferase mtmB1
Authors:Hao, B, Zhao, G, Kang, P.T, Soares, J.A, Ferguson, T.K, Gallucci, J, Krzycki, J.A, Chan, M.K.
Deposit date:2004-06-26
Release date:2004-10-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reactivity and chemical synthesis of L-pyrrolysine- the 22(nd) genetically encoded amino acid
Chem.Biol., 11, 2004
4BZ0
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BU of 4bz0 by Molmil
Structural characterization using Sulfur-SAD of the cytoplasmic domain of Burkholderia pseudomallei PilO2Bp, an actin-like protein component of a Type IVb R64-derivative pilus machinery.
Descriptor: POTASSIUM ION, PUTATIVE TYPE IV PILUS BIOSYNTHESIS PROTEIN
Authors:Lassaux, P, Manjasetty, B.A, Conchillo-Sole, O, Yero, D, Gourlay, L, Perletti, L, Daura, X, Belrhali, H, Bolognesi, M.
Deposit date:2013-07-22
Release date:2014-04-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Redefining the Pf06864 Pfam Family Based on Burkholderia Pseudomallei Pilo2BP S-Sad Crystal Structure.
Plos One, 9, 2014
5NCA
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BU of 5nca by Molmil
Solution structure of ComGC from Streptococcus pneumoniae
Descriptor: Competence protein ComGC
Authors:Erlendsson, S, Schmeider, P, Lichtenberg, C, Teilum, K, Akbey, U.
Deposit date:2017-03-03
Release date:2017-07-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure of the competence pilus major pilin ComGC in Streptococcus pneumoniae.
J. Biol. Chem., 292, 2017
1UG7
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BU of 1ug7 by Molmil
Solution structure of four helical up-and-down bundle domain of the hypothetical protein 2610208M17Rik similar to the protein FLJ12806
Descriptor: 2610208M17Rik protein
Authors:Li, H, Kigawa, T, Tomizawa, T, Koshiba, S, Inoue, M, Shirouzu, M, Terada, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-13
Release date:2004-08-17
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of four helical up-and-down bundle domain of the hypothetical protein 2610208M17Rik similar to the protein FLJ12806
To be Published
1TV4
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BU of 1tv4 by Molmil
Crystal structure of the sulfite MtmB complex
Descriptor: 3-METHYL-5-SULFO-PYRROLIDINE-2-CARBOXYLIC ACID, Monomethylamine methyltransferase mtmB1, SULFATE ION
Authors:Hao, B, Zhao, G, Kang, P.T, Soares, J.A, Ferguson, T.K, Gallucci, J, Krzycki, J.A, Chan, M.K.
Deposit date:2004-06-26
Release date:2004-10-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Reactivity and chemical synthesis of L-pyrrolysine- the 22(nd) genetically encoded amino acid
Chem.Biol., 11, 2004
1TWN
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BU of 1twn by Molmil
Crystal structures of ferrous and ferrous-NO forms of verdoheme in a complex with human heme oxygenase-1: catalytic implications for heme cleavage
Descriptor: Heme oxygenase 1, IRON-OCTAETHYLPORPHYRIN
Authors:Lad, L, Ortiz de Montellano, P.R, Poulos, T.L.
Deposit date:2004-07-01
Release date:2005-07-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of ferrous and ferrous-NO forms of verdoheme in a complex with human heme oxygenase-1: catalytic implications for heme cleavage.
J.Inorg.Biochem., 98, 2004
1TWU
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BU of 1twu by Molmil
2.0 A Crystal Structure of a YycE Protein of Unknown Function from Bacillus subtilis, Putative Glyoxalase/Fosfomycin Resistance Protein
Descriptor: Hypothetical protein yycE
Authors:Zhang, R, Quartey, P, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-07-01
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.0 A crystal structure of a hypothetical protein yycE from Bacillus subtilis
To be Published
4C6U
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BU of 4c6u by Molmil
Crystal structure of M. tuberculosis KasA in complex with TLM5
Descriptor: (5R)-3-acetyl-4-hydroxy-5-methyl-5-[(1Z)-2-methylbuta-1,3-dien-1-yl]thiophen-2(5H)-one, 1,2-ETHANEDIOL, 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1, ...
Authors:Schiebel, J, Kapilashrami, K, Fekete, A, Bommineni, G.R, Schaefer, C.M, Mueller, M.J, Tonge, P.J, Kisker, C.
Deposit date:2013-09-19
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for the Recognition of Mycolic Acid Precursors by Kasa, a Condensing Enzyme and Drug Target from Mycobacterium Tuberculosis
J.Biol.Chem., 288, 2013
5NZS
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BU of 5nzs by Molmil
The structure of the COPI coat leaf in complex with the ArfGAP2 uncoating factor
Descriptor: ADP-ribosylation factor 1, ADP-ribosylation factor GTPase-activating protein 2, Coatomer subunit alpha, ...
Authors:Dodonova, S.O, Aderhold, P, Kopp, J, Ganeva, I, Roehling, S, Hagen, W.J.H, Sinning, I, Wieland, F, Briggs, J.A.G.
Deposit date:2017-05-15
Release date:2017-06-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (10.1 Å)
Cite:9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
8APQ
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BU of 8apq by Molmil
CaMct - Mesaconyl-CoA C1:C4 CoA Transferase of Chloroflexus aurantiacus
Descriptor: (2E)-2-METHYLBUT-2-ENEDIOIC ACID, 2-methylfumaryl-CoA isomerase, COENZYME A, ...
Authors:Pfister, P, Zarzycki, J, Erb, T.J.
Deposit date:2022-08-10
Release date:2023-01-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural Basis for a Cork-Up Mechanism of the Intra-Molecular Mesaconyl-CoA Transferase.
Biochemistry, 62, 2023
3FGS
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BU of 3fgs by Molmil
Crystal structure of G65R/K206E double mutant of the N-lobe human transferrin
Descriptor: CARBONATE ION, FE (III) ION, Serotransferrin
Authors:Halbrooks, P.J, Mason, A.B, Everse, S.J.
Deposit date:2008-12-08
Release date:2009-05-19
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Consequences of the Substitution of Glycine 65 with Arginine in the N-Lobe of Human Transferrin.
Biochemistry, 48, 2009
4XZ1
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ZAP-70-tSH2:Compound-B adduct
Descriptor: 2-[(7-chloro-4-nitro-2,1,3-benzoxadiazol-5-yl)amino]ethanol, Tyrosine-protein kinase ZAP-70, doubly phosphorylated ITAM peptide
Authors:Barros, T, Kuriyan, J, Winger, J.A, Visperas, P.R.
Deposit date:2015-02-03
Release date:2015-07-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Modification by covalent reaction or oxidation of cysteine residues in the tandem-SH2 domains of ZAP-70 and Syk can block phosphopeptide binding.
Biochem. J., 465, 2015

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