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PDB: 45910 results

6TYB
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Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2019-08-08
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields.
Immunity, 51, 2019
7A0H
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Structure of homodimeric actin capping protein alpha subunit from Plasmodium berghei
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BROMIDE ION, F-actin-capping protein subunit alpha, ...
Authors:Bendes, A.A, Kursula, P, Kursula, I.
Deposit date:2020-08-09
Release date:2021-08-18
Last modified:2022-02-23
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and function of an atypical homodimeric actin capping protein from the malaria parasite.
Cell.Mol.Life Sci., 79, 2022
6PGT
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Protein Tyrosine Phosphatase 1B (1-301), T177A mutant, vanadate bound state
Descriptor: GLYCEROL, Tyrosine-protein phosphatase non-receptor type 1, VANADATE ION
Authors:Cui, D.S, Lipchock, J.M, Loria, J.P.
Deposit date:2019-06-24
Release date:2019-08-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Uncovering the Molecular Interactions in the Catalytic Loop That Modulate the Conformational Dynamics in Protein Tyrosine Phosphatase 1B.
J.Am.Chem.Soc., 141, 2019
3NKB
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BU of 3nkb by Molmil
A 1.9A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage
Descriptor: DNA/RNA (5'-D(*(DUR))-D(*GP*G)-R(P*CP*UP*UP*GP*CP*A)-3'), MAGNESIUM ION, The hepatitis delta virus ribozyme
Authors:Chen, J.-H, Yajima, R, Chadalavada, D.M, Chase, E, Bevilacqua, P.C, Golden, B.L.
Deposit date:2010-06-18
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.916 Å)
Cite:A 1.9 A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage.
Biochemistry, 49, 2010
7A0A
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Crystal structure of mouse CSAD in apo form
Descriptor: Cysteine sulfinic acid decarboxylase, SODIUM ION, SULFATE ION
Authors:Mahootchi, E, Raasakka, A, Haavik, J, Kursula, P.
Deposit date:2020-08-07
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of cysteine sulphinic acid decarboxylase reveals structural determinants for substrate specificity of pyridoxal phosphate-dependent decarboxylases
To be published
6PHA
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Protein Tyrosine Phosphatase 1B (1-301), F182A mutant, vanadate bound state
Descriptor: ACETATE ION, GLYCEROL, Tyrosine-protein phosphatase non-receptor type 1, ...
Authors:Cui, D.S, Lipchock, J.M, Loria, J.P.
Deposit date:2019-06-25
Release date:2019-08-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Uncovering the Molecular Interactions in the Catalytic Loop That Modulate the Conformational Dynamics in Protein Tyrosine Phosphatase 1B.
J.Am.Chem.Soc., 141, 2019
6ADE
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BU of 6ade by Molmil
Crystal structure of phosphorylated mutant of glyceraldehyde 3-phosphate dehydrogenase from human placenta at 3.15A resolution
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dilawari, R, Singh, P.K, Raje, M, Sharma, S, Singh, T.P.
Deposit date:2018-07-31
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of phosphorylated mutant of glyceraldehyde 3-phosphate dehydrogenase from human placenta at 3.15A resolution
To Be Published
4CXJ
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BU of 4cxj by Molmil
BTB domain of KEAP1 C151W mutant
Descriptor: KELCH-LIKE ECH-ASSOCIATED PROTEIN 1
Authors:Cleasby, A, Yon, J, Day, P.J, Richardson, C, Tickle, I.J, Williams, P.A, Callahan, J.F, Carr, R, Concha, N, Kerns, J.K, Qi, H, Sweitzer, T, Ward, P, Davies, T.G.
Deposit date:2014-04-07
Release date:2014-06-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Btb Domain of Keap1 and its Interaction with the Triterpenoid Antagonist Cddo.
Plos One, 9, 2014
4PFF
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Crystal structure of Plasmodium vivax SHMT with PLP Schiff base
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, putative
Authors:Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U.
Deposit date:2014-04-29
Release date:2014-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Plasmodium vivax serine hydroxymethyltransferase: implications for ligand-binding specificity and functional control.
Acta Crystallogr.,Sect.D, 70, 2014
6EEM
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BU of 6eem by Molmil
Crystal structure of Papaver somniferum tyrosine decarboxylase in complex with L-tyrosine
Descriptor: N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-tyrosine, SULFATE ION, TYROSINE, ...
Authors:Torrens-Spence, M.P, Chiang, Y, Smith, T, Vicent, M.A, Wang, Y, Weng, J.K.
Deposit date:2018-08-14
Release date:2018-09-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.61000657 Å)
Cite:Structural basis for divergent and convergent evolution of catalytic machineries in plant aromatic amino acid decarboxylase proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
1FOU
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BU of 1fou by Molmil
CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29
Descriptor: UPPER COLLAR PROTEIN
Authors:Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S.N, Anderson, D.L, Baker, T.S, Rossmann, M.G.
Deposit date:2000-08-28
Release date:2000-12-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
1F77
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STAPHYLOCOCCAL ENTEROTOXIN H DETERMINED TO 2.4 A RESOLUTION
Descriptor: ENTEROTOXIN H, SULFATE ION
Authors:Hakansson, M, Petersson, K, Nilsson, H, Forsberg, G, Bjork, P.
Deposit date:2000-06-26
Release date:2000-07-19
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of staphylococcal enterotoxin H: implications for binding properties to MHC class II and TcR molecules.
J.Mol.Biol., 302, 2000
7JTR
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BU of 7jtr by Molmil
Complex of maltose-binding protein (MBP) with single-chain Fv (scFv)
Descriptor: CHLORIDE ION, Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Loll, P.J.
Deposit date:2020-08-18
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A useful epitope tag derived from maltose binding protein.
Protein Sci., 30, 2021
1T1K
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BU of 1t1k by Molmil
NMR STRUCTURE OF HUMAN INSULIN MUTANT HIS-B10-ASP, VAL-B12-ALA, PRO-B28-LYS, LYS-B29-PRO, 15 STRUCTURES
Descriptor: Insulin
Authors:Huang, K, Xu, B, Hu, S.Q, Chu, Y.C, Hua, Q.X, Whittaker, J, Nakagawa, S.H, De Meyts, P, Katsoyannis, P.G, Weiss, M.A.
Deposit date:2004-04-16
Release date:2004-08-10
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:How Insulin Binds: the B-Chain alpha-Helix Contacts the L1 beta-Helix of the Insulin Receptor.
J.Mol.Biol., 341, 2004
5EZF
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BU of 5ezf by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (Pbca)
Descriptor: CALCIUM ION, Complementary strand, Pribnow box template strand
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-26
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5IKW
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BU of 5ikw by Molmil
Crystal Structure of BMP-2-inducible kinase in complex with an Indazole inhibitor
Descriptor: BMP-2-inducible protein kinase, N-(6-{3-[(cyclopropylsulfonyl)amino]phenyl}-1H-indazol-3-yl)cyclopropanecarboxamide
Authors:Counago, R.M, Sorrell, F.J, Krojer, T, Savitsky, P, Elkins, J.M, Axtman, A, Drewry, D, Wells, C, Zhang, C, Zuercher, W, Willson, T.M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Arruda, P, Gileadi, O, Structural Genomics Consortium (SGC)
Deposit date:2016-03-04
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal Structure of BMP-2-inducible kinase in complex with a 3-acylaminoindazole inhibitor GSK3236425A
To Be Published
5IOY
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BU of 5ioy by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with N-(cyclopentylmethyl)pyrrolidine-1-carboxamide at 1.77A resolution
Descriptor: N-(cyclopentylmethyl)pyrrolidine-1-carboxamide, SULFATE ION, TetR-family transcriptional regulatory repressor protein
Authors:Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2016-03-09
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
5C0C
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BU of 5c0c by Molmil
1E6 TCR in complex with HLA-A02 carrying RQFGPDWIVA
Descriptor: 1,2-ETHANEDIOL, 1E6 TCR Alpha Chain, 1E6 TCR Beta Chain, ...
Authors:Rizkallah, P.J, Bulek, A.M, Cole, D.K, Sewell, A.K.
Deposit date:2015-06-12
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.974 Å)
Cite:Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
J.Clin.Invest., 126, 2016
5IPA
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BU of 5ipa by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with (E)-3-(furan-3-yl)-1-(pyrrolidin-1-yl)prop-2-en-1-one at 1.78A resolution
Descriptor: (2E)-3-(furan-3-yl)-1-(pyrrolidin-1-yl)prop-2-en-1-one, TetR-family transcriptional regulatory repressor protein
Authors:Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2016-03-09
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
6PNZ
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BU of 6pnz by Molmil
The structure of the Aspartate Transcarbamoylase trimer from Staphylococcus aureus complexed with PALA at 2.27 Resolution.
Descriptor: Aspartate carbamoyltransferase, N-(PHOSPHONACETYL)-L-ASPARTIC ACID
Authors:Edwards, B.F.P, Evans, D.R, Patel, C.
Deposit date:2019-07-03
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The structure of the Aspartate Transcarbamoylase trimer from Staphylococcus aureus complexed with PALA at 2.27 Resolution.
To Be Published
6PO6
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BU of 6po6 by Molmil
MicroED Structure of a Natural Product VFAThiaGlu
Descriptor: YFAThiaGlu
Authors:Halaby, S, Gonen, T, Ting, C.P, Funk, M.A, van der Donk, W.A.
Deposit date:2019-07-03
Release date:2019-08-07
Last modified:2023-11-15
Method:ELECTRON CRYSTALLOGRAPHY (1 Å)
Cite:Use of a scaffold peptide in the biosynthesis of amino acid-derived natural products.
Science, 365, 2019
5IM4
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BU of 5im4 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I52-32
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, Phosphotransferase system, mannose/fructose-specific component IIA
Authors:Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
Deposit date:2016-03-05
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
5U18
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BU of 5u18 by Molmil
Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the Geneticin
Descriptor: GENETICIN, N-3'' methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Bury, P, Huang, F, Leadlay, P, Dias, M.V.B.
Deposit date:2016-11-28
Release date:2017-11-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis.
ACS Chem. Biol., 12, 2017
6KU1
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The structure of EanB/Y353A complex with ergothioneine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Wu, L, Liu, P.H, Zhou, J.H.
Deposit date:2019-08-30
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Single-Step Replacement of an Unreactive C-H Bond by a C-S Bond Using Polysulfide as the Direct Sulfur Source in the Anaerobic Ergothioneine Biosynthesis
Acs Catalysis, 10, 2020
5U1E
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Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the kanamycin B
Descriptor: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Putative gentamicin methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Bury, P, Huang, F, Leadlay, P, Dias, M.V.B.
Deposit date:2016-11-28
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.213 Å)
Cite:Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis.
ACS Chem. Biol., 12, 2017

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