Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45697 件

8T51
DownloadVisualize
BU of 8t51 by Molmil
Crystal structure of Fab 3.10C2 bound to TREM2
分子名称: 3.10C2 Fab heavy chain, 3.10C2 Fab light chain, ACETATE ION, ...
著者Hsu, P.L, Wallweber, H.
登録日2023-06-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rapid affinity optimization of an anti-TREM2 clinical lead antibody by cross-lineage immune repertoire mining
To Be Published
7Z1I
DownloadVisualize
BU of 7z1i by Molmil
Plant myrosinase TGG1 from Arabidopsis thaliana
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Gao, Y, Farmer, E, Jimenez-Sandoval, P, Santiago, J.
登録日2022-02-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Plant myrosinase TGG1 from Arabidopsis thaliana
To Be Published
7OZK
DownloadVisualize
BU of 7ozk by Molmil
CryoEM structure of human enterovirus 70 in complex with Pleconaril
分子名称: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, Capsid protein VP1, Capsid protein VP2, ...
著者Fuzik, T, Plevka, P, Moravcova, J.
登録日2021-06-28
公開日2022-07-27
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (2.31 Å)
主引用文献Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
7OZL
DownloadVisualize
BU of 7ozl by Molmil
CryoEM structure of human enterovirus 70 in complex with WIN51711
分子名称: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, Capsid protein VP1, Capsid protein VP2, ...
著者Fuzik, T, Plevka, P, Moravcova, J.
登録日2021-06-28
公開日2022-07-27
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
5YG4
DownloadVisualize
BU of 5yg4 by Molmil
Plasmodium vivax SHMT bound with PLP-glycine and S-GS849
分子名称: 2-[1-[(3~{S})-6'-azanyl-5'-cyano-7-fluoranyl-2,2,3'-trimethyl-spiro[1~{H}-indene-3,4'-2~{H}-pyrano[2,3-c]pyrazole]-5-yl]piperidin-4-yl]ethanoic acid, CHLORIDE ION, GLYCEROL, ...
著者Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U, Schwertz, G, Diederich, F.
登録日2017-09-22
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Potent Inhibitors of Plasmodial Serine Hydroxymethyltransferase (SHMT) Featuring a Spirocyclic Scaffold
ChemMedChem, 13, 2018
7Z6T
DownloadVisualize
BU of 7z6t by Molmil
Aspergillus clavatus M36 protease without the propeptide
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Extracellular metalloproteinase mep, ...
著者Wilkens, C, Qiu, J, Meyer, A.S, Morth, J.P.
登録日2022-03-14
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Aspergillus clavatus M36 protease without the propeptide
To Be Published
5F0C
DownloadVisualize
BU of 5f0c by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium tuberculosis in complex with compound 4 at 1.87A resolution
分子名称: 3-cyclopentyl-~{N}-(3-piperidin-1-ylphenyl)propanamide, HTH-type transcriptional regulator EthR, SULFATE ION
著者Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
登録日2015-11-27
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016
5IAO
DownloadVisualize
BU of 5iao by Molmil
Structure and mapping of spontaneous mutational sites of PyrR from Mycobacterium tuberculosis
分子名称: 5-FLUOROURACIL, Bifunctional protein PyrR
著者Sivaraman, J, Ghode, P, Ramachandran, S.
登録日2016-02-21
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Structure and mapping of spontaneous mutational sites of PyrR from Mycobacterium tuberculosis
Biochem.Biophys.Res.Commun., 471, 2016
5IEG
DownloadVisualize
BU of 5ieg by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with N-9'-methoxynonyl-1-deoxynojirimycin.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
登録日2016-02-25
公開日2016-07-27
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.822 Å)
主引用文献Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EZS
DownloadVisualize
BU of 5ezs by Molmil
Venezuelan Equine Encephalitis Virus (VEEV) Nonstructural Protein 2 (nsP2) Cysteine Protease Inhibited by E64d
分子名称: Non-structural Protein 2 Cysteine Protease, ethyl (3S)-3-hydroxy-4-({(2S)-4-methyl-1-[(3-methylbutyl)amino]-1-oxopentan-2-yl}amino)-4-oxobutanoate
著者Legler, P.M.
登録日2015-11-26
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Kinetic, Mutational, and Structural Studies of the Venezuelan Equine Encephalitis Virus Nonstructural Protein 2 Cysteine Protease.
Biochemistry, 55, 2016
5LWO
DownloadVisualize
BU of 5lwo by Molmil
Structure of Spin-labelled T4 lysozyme mutant L115C-R119C-R1 at 100K
分子名称: 2-HYDROXYETHYL DISULFIDE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
著者Loll, B, Consentius, P, Gohlke, U, Mueller, R, Kaupp, M, Heinemann, U, Wahl, M.C, Risse, T.
登録日2016-09-18
公開日2017-03-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.183 Å)
主引用文献Internal Dynamics of the 3-Pyrroline-N-Oxide Ring in Spin-Labeled Proteins.
J Phys Chem Lett, 8, 2017
6U5A
DownloadVisualize
BU of 6u5a by Molmil
Crystal structure of Equine Serum Albumin complex with 6-MNA
分子名称: (6-methoxynaphthalen-2-yl)acetic acid, SULFATE ION, Serum albumin, ...
著者Czub, M.P, Handing, K.B, Venkataramany, B.S, Cymborowski, M.T, Shabalin, I.G, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-08-27
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Albumin-Based Transport of Nonsteroidal Anti-Inflammatory Drugs in Mammalian Blood Plasma.
J.Med.Chem., 63, 2020
6ECI
DownloadVisualize
BU of 6eci by Molmil
Structure of the FAD binding protein MSMEG_5243 from Mycobacterium smegmatis
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Pyridoxamine 5'-phosphate oxidase-related, ...
著者Ahmed, F.H, Antoney, J, Carr, P.D, Jackson, C.J.
登録日2018-08-07
公開日2018-12-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献FAD-sequestering proteins protect mycobacteria against hypoxic and oxidative stress.
J. Biol. Chem., 294, 2019
5EX2
DownloadVisualize
BU of 5ex2 by Molmil
Crystal structure of cyclophilin AquaCyp293 from Hirschia baltica
分子名称: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Jakob, R.P, Maier, T.
登録日2015-11-23
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.294 Å)
主引用文献Structural and Functional Characterization of a Novel Family of Cyclophilins, the AquaCyps.
Plos One, 11, 2016
4HQI
DownloadVisualize
BU of 4hqi by Molmil
Structure of O6-Benzyl-2'-deoxyguanosine opposite perimidinone-derived synthetic nucleoside in DNA duplex
分子名称: SPERMINE, STRONTIUM ION, Short modified nucleic acids
著者Kowal, E.A, Lad, R, Pallan, P.S, Muffly, E, Wawrzak, Z, Egli, M, Sturla, S.J, Stone, M.P.
登録日2012-10-25
公開日2013-07-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Recognition of O6-benzyl-2'-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction.
Nucleic Acids Res., 41, 2013
8T0V
DownloadVisualize
BU of 8t0v by Molmil
Closed state of lysine 5,6-aminomutase from Thermoanaerobacter tengcongensis
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, D-lysine 5,6-aminomutase alpha subunit, ...
著者Tian, S, Voss, P, Pham, K, Klose, T.
登録日2023-06-01
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Catalysis in Motion: Large-Scale Domain Shift Enables Co-C Bond Homolysis in Lysine 5,6-Aminomutase
To Be Published
5IQ7
DownloadVisualize
BU of 5iq7 by Molmil
Crystal structure of 10E8-S74W Fab in complex with an HIV-1 gp41 peptide.
分子名称: 10E8-S74W Heavy Chain, 10E8-S74W Light Chain, gp41 MPER peptide
著者Ofek, G, Kwon, Y.D, Caruso, W, Kwong, P.D.
登録日2016-03-10
公開日2016-04-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2869 Å)
主引用文献Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design.
J.Virol., 90, 2016
4QAB
DownloadVisualize
BU of 4qab by Molmil
X-RAY STRUCTURE of ACETYLCHOLINE BINDING PROTEIN (ACHBP) IN COMPLEX WITH 4-(MORPHOLIN-4-YL)-6-[4-(TRIFLUOROMETHYL)PHENYL]PYRIMIDIN-2-AMINE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(morpholin-4-yl)-6-[4-(trifluoromethyl)phenyl]pyrimidin-2-amine, Acetylcholine-binding protein, ...
著者Kaczanowska, K, Harel, M, Radic, Z, Changeux, J.-P, Finn, M.G, Taylor, P.
登録日2014-05-03
公開日2014-07-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.984 Å)
主引用文献Structural basis for cooperative interactions of substituted 2-aminopyrimidines with the acetylcholine binding protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
5EZH
DownloadVisualize
BU of 5ezh by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 21 at 1.7A resolution
分子名称: HTH-type transcriptional regulator EthR, SULFATE ION, ~{N}-[(1-pyridin-2-ylpiperidin-4-yl)methyl]pyrrolidine-1-carboxamide
著者Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
登録日2015-11-26
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016
4X3F
DownloadVisualize
BU of 4x3f by Molmil
Crystal structure of the intracellular domain of the M. tuberculosis Ser/Thr kinase PknA
分子名称: Serine/threonine-protein kinase PknA
著者Wagner, T, Wehenkel, A, Alzari, P.M, Bellinzoni, M.
登録日2014-11-28
公開日2015-01-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of the catalytic domain of the ser/thr kinase PknA from M. tuberculosis shows an Src-like autoinhibited conformation.
Proteins, 83, 2015
5EZQ
DownloadVisualize
BU of 5ezq by Molmil
Venezuelan Equine Encephalitis Virus (VEEV) Nonstructural protein 2 (nsP2) Cysteine Protease
分子名称: Non-structural Protein 2 Cysteine Protease
著者Compton, J.R, Legler, P.M.
登録日2015-11-26
公開日2016-04-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Kinetic, Mutational, and Structural Studies of the Venezuelan Equine Encephalitis Virus Nonstructural Protein 2 Cysteine Protease.
Biochemistry, 55, 2016
2MM3
DownloadVisualize
BU of 2mm3 by Molmil
Solution NMR structure of the ternary complex of human ileal bile acid-binding protein with glycocholate and glycochenodeoxycholate
分子名称: GLYCOCHENODEOXYCHOLIC ACID, GLYCOCHOLIC ACID, Gastrotropin
著者Horvath, G, Egyed, O, Bencsura, A, Simon, A, Tochtrop, G.P, DeKoster, G.T, Covey, D.F, Cistola, D.P, Toke, O.
登録日2014-03-07
公開日2014-05-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural determinants of ligand binding in the ternary complex of human ileal bile acid binding protein with glycocholate and glycochenodeoxycholate obtained from solution NMR
FEBS J., 283, 2016
5F0F
DownloadVisualize
BU of 5f0f by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 15 at 1.76A resolution
分子名称: 4-[4-(3-oxidanylidene-3-pyrrolidin-1-yl-propyl)piperidin-1-yl]benzenecarbonitrile, HTH-type transcriptional regulator EthR, SULFATE ION
著者Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
登録日2015-11-27
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016
6ECY
DownloadVisualize
BU of 6ecy by Molmil
OhrA (Organic Hydroperoxide Resistance protein) wild type from chromobacterium violaceum
分子名称: Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Netto, L.E.S.
登録日2018-08-08
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
5F27
DownloadVisualize
BU of 5f27 by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 2 at 1.68A resolution
分子名称: HTH-type transcriptional regulator EthR, ~{N}-methyl-1-(4-piperidin-1-ylphenyl)methanamine
著者Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
登録日2015-12-01
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.684 Å)
主引用文献A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon