Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45788 件

6KZQ
DownloadVisualize
BU of 6kzq by Molmil
structure of PTP-MEG2 and NSF-pY83 peptide complex
分子名称: NSF-pY83 peptide, Tyrosine-protein phosphatase non-receptor type 9
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
6L03
DownloadVisualize
BU of 6l03 by Molmil
structure of PTP-MEG2 and MUNC18-1-pY145 peptide complex
分子名称: Tyrosine-protein phosphatase non-receptor type 9, stxbp1-pY145 peptide
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.084 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
3SS2
DownloadVisualize
BU of 3ss2 by Molmil
Neutron structure of perdeuterated rubredoxin using 48 hours 3rd pass data
分子名称: FE (III) ION, Rubredoxin
著者Munshi, P, Chung, C.-L, Blakeley, M.P, Weiss, K.L, Myles, D.A.A, Meilleur, F.
登録日2011-07-07
公開日2011-12-28
最終更新日2023-09-13
実験手法NEUTRON DIFFRACTION (1.75 Å)
主引用文献Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D, 68, 2012
6DTI
DownloadVisualize
BU of 6dti by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin
分子名称: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Cantara, W.A, DeMirci, H, Agris, P.F.
登録日2018-06-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.54 Å)
主引用文献A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.
J.Mol.Biol., 432, 2020
4EQB
DownloadVisualize
BU of 4eqb by Molmil
1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Minasov, G, Wawrzak, Z, Stogios, P.J, Kudritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-04-18
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES.
TO BE PUBLISHED
4ER3
DownloadVisualize
BU of 4er3 by Molmil
Crystal Structure of Human DOT1L in complex with inhibitor EPZ004777
分子名称: 1,2-ETHANEDIOL, 7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Histone-lysine N-methyltransferase, ...
著者Wernimont, A.K, Tempel, W, Yu, W, Scopton, A, Li, Y, Nguyen, K.T, Federation, A, Marineau, J, Qi, J, Vedadi, M, Bradner, J.E, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2012-04-19
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Catalytic site remodelling of the DOT1L methyltransferase by selective inhibitors.
Nat Commun, 3, 2012
8R05
DownloadVisualize
BU of 8r05 by Molmil
Photorhabdus lamondii ClpP in complex with the natural product beta-lactone inhibitor Cystargolide A at 2.5 A resolution
分子名称: ATP-dependent Clp protease proteolytic subunit, Cystargolide A (bound)
著者Illigmann, A, Vielberg, M.-T, Lakemeyer, M, Wolf, F, Staudt, N, Dema, T, Stange, P, Liebhart, E, Kuttenlochner, W, Kulik, A, Malik, I, Grond, S, Sieber, S.A, Groll, M, Kaysser, L, Broetz-Oesterhelt, H.
登録日2023-10-30
公開日2023-12-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Staphylococcus aureus ClpP Bound to the Covalent Active-Site Inhibitor Cystargolide A.
Angew.Chem.Int.Ed.Engl., 63, 2024
8R03
DownloadVisualize
BU of 8r03 by Molmil
Staphylococcus aureus ClpP in complex with the natural product beta-lactone inhibitor Cystargolide A at 2.0 A resolution
分子名称: 1,2-ETHANEDIOL, ATP-dependent Clp protease proteolytic subunit, Cystargolide A (bound)
著者Illigmann, A, Vielberg, M.-T, Lakemeyer, M, Wolf, F, Staudt, N, Dema, T, Stange, P, Liebhart, E, Kuttenlochner, W, Kulik, A, Malik, I, Grond, S, Sieber, S.A, Groll, M, Kaysser, L, Broetz-Oesterhelt, H.
登録日2023-10-30
公開日2023-12-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Staphylococcus aureus ClpP Bound to the Covalent Active-Site Inhibitor Cystargolide A.
Angew.Chem.Int.Ed.Engl., 63, 2024
8R04
DownloadVisualize
BU of 8r04 by Molmil
Structure of Staphylococcus aureus ClpP Bound to the Covalent Active Site Inhibitor Cystargolide A
分子名称: ATP-dependent Clp protease proteolytic subunit, Cystargolide A (bound)
著者Illigmann, A, Vielberg, M.-T, Lakemeyer, M, Wolf, F, Staudt, N, Dema, T, Stange, P, Liebhart, E, Kuttenlochner, W, Kulik, A, Malik, I, Grond, S, Sieber, S.A, Groll, M, Kaysser, L, Broetz-Oesterhelt, H.
登録日2023-10-30
公開日2023-12-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Staphylococcus aureus ClpP Bound to the Covalent Active-Site Inhibitor Cystargolide A.
Angew.Chem.Int.Ed.Engl., 63, 2024
4E4S
DownloadVisualize
BU of 4e4s by Molmil
Crystal structure of Pika GITRL
分子名称: GLYCEROL, MAGNESIUM ION, Tumor necrosis factor ligand superfamily member 18
著者Kumar, P.R, Bhosle, R, Bonanno, J, Chowdhury, S, Gizzi, A, Glen, S, Hillerich, B, Hammonds, J, Seidel, R, Toro, R, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2012-03-13
公開日2012-03-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of GITRL from Ochotona princeps
to be published
4E5T
DownloadVisualize
BU of 4e5t by Molmil
Crystal structure of a putative Mandelate racemase/Muconate lactonizing enzyme (Target PSI-200750) from Labrenzia alexandrii DFL-11
分子名称: MAGNESIUM ION, Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein
著者Kumar, P.R, Bonanno, J, Chowdhury, S, Foti, R, Gizzi, A, Glen, S, Hammonds, J, Hillerich, B, Matikainen, B, Seidel, R, Toro, R, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2012-03-14
公開日2012-03-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a putative MR/ML enzyme from Labrenzia alexandrii DFL-11
to be published
4EQE
DownloadVisualize
BU of 4eqe by Molmil
Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Lys-AMS
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINE, Histidine triad nucleotide-binding protein 1
著者Wang, J, Fang, P, Guo, M.
登録日2012-04-18
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012
2PMJ
DownloadVisualize
BU of 2pmj by Molmil
Crystal structure of the complex formed between phospholipase A2 and 1, 2 benzopyrone at 2.4 A resolution
分子名称: ACETONITRILE, COUMARIN, Phospholipase A2 VRV-PL-VIIIa
著者Kumar, S, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
登録日2007-04-23
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the complex formed between phospholipase A2 and 1, 2 benzopyrone at 2.4 A resolution
to be published
4Z6H
DownloadVisualize
BU of 4z6h by Molmil
Crystal structure of BRD9 bromodomain in complex with a valerolactam quinolone ligand
分子名称: 1,4-dimethyl-7-(2-oxopiperidin-1-yl)quinolin-2(1H)-one, Bromodomain-containing protein 9
著者Tallant, C, Structural Genomics Consortium (SGC), Clark, P.G.K, Vieira, L.C.C, Krojer, T, Nunez-Alonso, G, Picaud, S, Fedorov, O, Dixon, D.J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Brennan, P.E, Knapp, S.
登録日2015-04-05
公開日2015-05-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献LP99: Discovery and Synthesis of the First Selective BRD7/9 Bromodomain Inhibitor.
Angew.Chem.Int.Ed.Engl., 54, 2015
8QOH
DownloadVisualize
BU of 8qoh by Molmil
Crystal structure of the kinetoplastid kinetochore protein KKT14 C-terminal domain from Apiculatamorpha spiralis
分子名称: kinetochore protein KKT14
著者Carter, W, Ballmer, D, Ishii, M, Ludzia, P, Akiyoshi, B.
登録日2023-09-28
公開日2024-01-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Kinetoplastid kinetochore proteins KKT14-KKT15 are divergent Bub1/BubR1-Bub3 proteins.
Open Biology, 14, 2024
4EFD
DownloadVisualize
BU of 4efd by Molmil
Crystal Structure of an M17 aminopeptidase from Trypanosoma Brucei, Tb427tmp.02.4440
分子名称: Aminopeptidase, GLYCEROL, MANGANESE (II) ION, ...
著者Wernimont, A.K, Osman, K.T, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Lin, Y.H, Structural Genomics Consortium (SGC)
登録日2012-03-29
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of an M17 aminopeptidase from Trypanosoma Brucei, Tb427tmp.02.4440
To be Published
3TCH
DownloadVisualize
BU of 3tch by Molmil
Crystal structure of E. coli OppA in an open conformation
分子名称: Periplasmic oligopeptide-binding protein
著者Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A.
登録日2011-08-09
公開日2011-10-12
最終更新日2012-01-11
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Escherichia coli peptide binding protein OppA has a preference for positively charged peptides.
J.Mol.Biol., 414, 2011
8RC4
DownloadVisualize
BU of 8rc4 by Molmil
Structure of Integrator-PP2A complex
分子名称: DSS1, Integrator complex subunit 1, Integrator complex subunit 10, ...
著者Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P.
登録日2023-12-06
公開日2024-02-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of Integrator-dependent RNA polymerase II termination.
Nature, 629, 2024
6DNJ
DownloadVisualize
BU of 6dnj by Molmil
Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 28 round 5
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-nitro-1,2-benzoxazole, Kemp eliminase KE07
著者Jackson, C.J, Hong, N.-S, Carr, P.D.
登録日2018-06-06
公開日2018-08-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The evolution of multiple active site configurations in a designed enzyme.
Nat Commun, 9, 2018
8RBZ
DownloadVisualize
BU of 8rbz by Molmil
Structure of Integrator-PP2A-SOSS-CTD post-termination complex
分子名称: DNA-directed RNA polymerase subunit, DSS1, Integrator complex subunit 1, ...
著者Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P.
登録日2023-12-05
公開日2024-02-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of Integrator-dependent RNA polymerase II termination.
Nature, 629, 2024
3TAK
DownloadVisualize
BU of 3tak by Molmil
Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, Dihydrodipicolinate synthase, GLYCEROL, ...
著者Singh, A, Kaushik, S, Sinha, M, Tewari, R, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-08-04
公開日2011-08-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution
To be Published
8RQU
DownloadVisualize
BU of 8rqu by Molmil
Structure of TEM1 beta-lactamase variant 70.a
分子名称: Beta-lactamase TEM-1, MAGNESIUM ION
著者Napier, E, Fram, B.F, Gauthier, N.P, Sander, C, Khan, A.R.
登録日2024-01-19
公開日2024-02-14
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Simultaneous enhancement of multiple functional properties using evolution-informed protein design.
Nat Commun, 15, 2024
2PTQ
DownloadVisualize
BU of 2ptq by Molmil
Crystal structure of Escherichia coli adenylosuccinate lyase mutant H171N with bound AMP and fumarate
分子名称: ADENOSINE MONOPHOSPHATE, Adenylosuccinate lyase, FUMARIC ACID
著者Tsai, M, Howell, P.L.
登録日2007-05-08
公開日2007-07-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrate and Product Complexes of Escherichia coli Adenylosuccinate Lyase Provide New Insights into the Enzymatic Mechanism.
J.Mol.Biol., 370, 2007
4EQH
DownloadVisualize
BU of 4eqh by Molmil
Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Trp-AMS
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, Histidine triad nucleotide-binding protein 1
著者Wang, J, Fang, P, Guo, M.
登録日2012-04-18
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.668 Å)
主引用文献Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012
3TDF
DownloadVisualize
BU of 3tdf by Molmil
Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution
分子名称: 2-KETOBUTYRIC ACID, Dihydrodipicolinate synthase
著者Kumar, M, Kaushik, S, Sinha, M, Kaur, P, Tewari, R, Sharma, S, Singh, T.P.
登録日2011-08-11
公開日2011-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution
To be Published

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon