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PDB: 46476 results

3GW2
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BU of 3gw2 by Molmil
Crystal structure of possible transcriptional regulatory protein (fragment 1-100) from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR242E.
Descriptor: Possible transcriptional regulatory arsR-family protein
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-03-31
Release date:2009-04-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Northeast Structural Genomics Consortium Target MbR242E
To be published
4DED
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BU of 4ded by Molmil
Aurora A in complex with YL1-038-21
Descriptor: 1,2-ETHANEDIOL, 2-({2-[(4-carbamoylphenyl)amino]pyrimidin-4-yl}amino)benzamide, Aurora kinase A
Authors:Martin, M.P, Zhu, J.-Y, Schonbrunn, E.
Deposit date:2012-01-20
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Development of o-Chlorophenyl Substituted Pyrimidines as Exceptionally Potent Aurora Kinase Inhibitors.
J.Med.Chem., 55, 2012
2KGY
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BU of 2kgy by Molmil
Solution structure of Rv0603 protein from Mycobacterium tuberculosis H37Rv
Descriptor: POSSIBLE EXPORTED PROTEIN
Authors:Tripathi, S, Pulavarti, S.V.S.R.K, Pathak, P.P, Meher, A.K, Jain, A, Arora, A.
Deposit date:2009-03-23
Release date:2010-03-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of Rv0603 protein from Mycobacterium tuberculosis H37Rv
To be Published
3FNL
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BU of 3fnl by Molmil
Crystal Structure of the Complex of Buffalo Lactoperoxidase with Salicylhydroxamic Acid at 2.48 A Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
Authors:Sheikh, I.A, Vikram, G, Singh, N, Sinha, M, Bhushan, A, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2008-12-25
Release date:2009-01-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal Structure of the Complex of Buffalo Lactoperoxidase with Salicylhydroxamic Acid at 2.48 A Resolution
To be Published
3H5C
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BU of 3h5c by Molmil
X-Ray Structure of Protein Z-Protein Z Inhibitor Complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein Z-dependent protease inhibitor, Vitamin K-dependent protein Z, ...
Authors:Dementiev, A.A, Huang, X, Olson, S.T, Gettins, P.G.W.
Deposit date:2009-04-21
Release date:2010-04-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.26 Å)
Cite:Basis for the specificity and activation of the serpin protein Z-dependent proteinase inhibitor (ZPI) as an inhibitor of membrane-associated factor Xa.
J.Biol.Chem., 285, 2010
1ZCI
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BU of 1zci by Molmil
HIV-1 DIS RNA subtype F- monoclinic form
Descriptor: 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', POTASSIUM ION
Authors:Ennifar, E, Dumas, P.
Deposit date:2005-04-12
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
3FOI
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BU of 3foi by Molmil
Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 contracted tail
Descriptor: Tail sheath protein Gp18
Authors:Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2008-12-30
Release date:2009-03-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (16 Å)
Cite:The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
5W3G
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BU of 5w3g by Molmil
Solution Structure of ETS Transcription Factor PU.1
Descriptor: Transcription factor PU.1
Authors:Lau, D.K.W, Okon, M, McIntosh, L.P.
Deposit date:2017-06-07
Release date:2018-06-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conserved protein dynamics within the ETS transcription factor family
To be published
1JLA
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BU of 1jla by Molmil
CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TNK-651
Descriptor: 6-BENZYL-1-BENZYLOXYMETHYL-5-ISOPROPYL URACIL, HIV-1 RT A-chain, HIV-1 RT B-chain
Authors:Ren, J, Nichols, C, Bird, L, Chamberlain, P, Weaver, K, Short, S, Stuart, D.I, Stammers, D.K.
Deposit date:2001-07-16
Release date:2001-10-03
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural mechanisms of drug resistance for mutations at codons 181 and 188 in HIV-1 reverse transcriptase and the improved resilience of second generation non-nucleoside inhibitors.
J.Mol.Biol., 312, 2001
4KR6
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BU of 4kr6 by Molmil
Crystal structure of a 4-thiouridine synthetase - RNA complex
Descriptor: MERCURY (II) ION, Probable tRNA sulfurtransferase, RNA (39-MER)
Authors:Neumann, P, Ficner, R, Lakomek, K.
Deposit date:2013-05-16
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.
Nucleic Acids Res., 42, 2014
3EW5
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BU of 3ew5 by Molmil
Structure of the tetragonal crystal form of X (ADRP) domain from FCoV
Descriptor: CHLORIDE ION, SN-GLYCEROL-1-PHOSPHATE, SULFATE ION, ...
Authors:Wojdyla, J.A, Manolaridis, I, Tucker, P.A.
Deposit date:2008-10-14
Release date:2009-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
1JOD
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BU of 1jod by Molmil
Crystal Structure of Murine Olfactory Marker Protein in Spacegroup P43212
Descriptor: CACODYLATE ION, Olfactory Marker Protein, ZINC ION
Authors:Smith, P, Hunt, J.F.
Deposit date:2001-07-27
Release date:2001-08-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of the olfactory marker protein at 2.3 A resolution.
J.Mol.Biol., 319, 2002
1JWC
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BU of 1jwc by Molmil
NMR SOLUTION STRUCTURE OF THE RNA HAIRPIN BINDING SITE FOR THE HISTONE STEM-LOOP BINDING PROTEIN
Descriptor: 5'-R(*GP*GP*CP*CP*AP*AP*AP*GP*GP*CP*CP*CP*UP*UP*UP*UP*CP*AP*GP*GP*GP*CP*CP*AP*CP*CP*CP*A)-3'
Authors:Dejong, E.S, Marzluff, W.F, Nikonowicz, E.P.
Deposit date:2001-09-03
Release date:2002-03-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure and dynamics of the RNA-binding site for the histone mRNA stem-loop binding protein.
RNA, 8, 2002
1AOH
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BU of 1aoh by Molmil
SINGLE COHESIN DOMAIN FROM THE SCAFFOLDING PROTEIN CIPA OF THE CLOSTRIDIUM THERMOCELLUM CELLULOSOME
Descriptor: Cellulosomal-scaffolding protein A
Authors:Alzari, P.M, Tavares, G.
Deposit date:1997-07-03
Release date:1998-07-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of a type I cohesin domain at 1.7 A resolution.
J.Mol.Biol., 273, 1997
4DRF
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BU of 4drf by Molmil
Crystal Structure of Bacterial Pnkp-C/Hen1-N Heterodimer
Descriptor: GLYCEROL, Metallophosphoesterase, Methyltransferase type 12
Authors:Huang, R.H, Wang, P.
Deposit date:2012-02-17
Release date:2012-08-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis of bacterial protein Hen1 activating the ligase activity of bacterial protein Pnkp for RNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
4OD1
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BU of 4od1 by Molmil
Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody
Descriptor: CAP256-VRC26.03 heavy chain, CAP256-VRC26.03 light chain
Authors:Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
Deposit date:2014-01-09
Release date:2014-02-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
1B6X
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BU of 1b6x by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE GUANINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 4 STRUCTURES
Descriptor: 5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3'
Authors:Cullinan, D, Johnson, F, Grollman, A.P, Eisenberg, M, De Los Santos, C.
Deposit date:1999-01-19
Release date:1999-01-27
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of a DNA duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyguanosine.
Biochemistry, 36, 1997
4OLY
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BU of 4oly by Molmil
Crystal structure of antibody VRC07-G54R in complex with clade A/E 93TH057 HIV-1 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
Authors:Kwon, Y.D, Kwong, P.D.
Deposit date:2014-01-25
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
3GLW
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BU of 3glw by Molmil
Quaternary Structure of Drosophila melanogaster IC/Tctex-1/LC8; Allosteric Interactions of Dynein Light Chains with Dynein Intermediate Chain
Descriptor: Dynein intermediate Chain, Dynein light chain 1, cytoplasmic
Authors:Hall, J.D, Karplus, P.A, Barbar, E.J.
Deposit date:2009-03-12
Release date:2009-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Multivalency in the assembly of intrinsically disordered Dynein intermediate chain.
J.Biol.Chem., 284, 2009
4BLG
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BU of 4blg by Molmil
Crystal structure of MHV-68 Latency-associated nuclear antigen (LANA) C-terminal DNA binding domain
Descriptor: LATENCY-ASSOCIATED NUCLEAR ANTIGEN, PHOSPHATE ION
Authors:Correia, B, Cerqueira, S.A, Beauchemin, C, Pires De Miranda, M, Li, S, Ponnusamy, R, Rodrigues, L, Schneider, T.R, Carrondo, M.A, Kaye, K.M, Simas, J.P, McVey, C.E.
Deposit date:2013-05-02
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Gamma-2 Herpesvirus Lana DNA Binding Domain Identifies Charged Surface Residues which Impact Viral Latency
Plos Pathog., 9, 2013
4BGL
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BU of 4bgl by Molmil
Superoxide reductase (Neelaredoxin) from Archaeoglobus fulgidus
Descriptor: FE (III) ION, GLYCEROL, SUPEROXIDE REDUCTASE
Authors:Bandeiras, T.M, Rodrigues, J.V, Sousa, C.M, Barradas, A.R, Pinho, F.G, Pinto, A.F, Teixeira, M, Matias, P.M, Romao, C.V.
Deposit date:2013-03-27
Release date:2014-04-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Superoxide Reductase from Giardia Intestinalis: Structural Characterization of the First Sor from a Eukaryotic Organism Shows an Iron Centre that is Highly Sensitive to Photoreduction
Acta Crystallogr.,Sect.D, 71, 2015
4OE1
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BU of 4oe1 by Molmil
Crystal structure of the pentatricopeptide repeat protein PPR10 (C256S/C430S/C449S) in complex with an 18-nt PSAJ rna element
Descriptor: Chloroplast pentatricopeptide repeat protein 10, PHOSPHATE ION, psaJ RNA
Authors:Li, Q, Yan, C, Wu, J, Yin, P, Yan, N.
Deposit date:2014-01-11
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Examination of the dimerization states of the single-stranded RNA recognition protein pentatricopeptide repeat 10 (PPR10).
J.Biol.Chem., 289, 2014
4K9J
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Structure of Re(CO)3(4,7-dimethyl-phen)(Thr126His)(Lys122Trp)(His83Glu)(Trp48Phe)(Tyr72Phe)(Tyr108Phe)AzCu(II), a Rhenium modified Azurin mutant
Descriptor: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
Authors:Takematsu, K, Williamson, H.R, Blanco-Rodriguez, A.M, Sokolova, L, Nikolovski, P, Kaiser, J.T, Towrie, M, Clark, I.P, Vlcek Jr, A, Winkler, J.R, Gray, H.B.
Deposit date:2013-04-20
Release date:2013-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tryptophan-accelerated electron flow across a protein-protein interface.
J.Am.Chem.Soc., 135, 2013
4PMP
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BU of 4pmp by Molmil
The structure of TrkA kinase bound to the inhibitor 1-cyclopropyl-1-[3-(1,3-thiazol-2-yl)benzyl]-3-[4-(trifluoromethoxy)phenyl]urea
Descriptor: 1-cyclopropyl-1-[3-(1,3-thiazol-2-yl)benzyl]-3-[4-(trifluoromethoxy)phenyl]urea, ACETATE ION, CHLORIDE ION, ...
Authors:Su, H.P.
Deposit date:2014-05-22
Release date:2014-06-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Maximizing diversity from a kinase screen: identification of novel and selective pan-Trk inhibitors for chronic pain.
J.Med.Chem., 57, 2014
4PGE
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BU of 4pge by Molmil
MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGNYPAW
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Celie, P, Joosten, R.P, Perrakis, A, Neefjes, J.
Deposit date:2014-05-01
Release date:2015-01-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:The first step of peptide selection in antigen presentation by MHC class I molecules.
Proc.Natl.Acad.Sci.USA, 112, 2015

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