Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 results

1LBG
DownloadVisualize
BU of 1lbg by Molmil
LACTOSE OPERON REPRESSOR BOUND TO 21-BASE PAIR SYMMETRIC OPERATOR DNA, ALPHA CARBONS ONLY
Descriptor: DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), PROTEIN (LACTOSE OPERON REPRESSOR)
Authors:Lewis, M, Chang, G, Horton, N.C, Kercher, M.A, Pace, H.C, Lu, P.
Deposit date:1996-01-03
Release date:1996-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (4.8 Å)
Cite:Crystal structure of the lactose operon repressor and its complexes with DNA and inducer.
Science, 271, 1996
4JJ3
DownloadVisualize
BU of 4jj3 by Molmil
Crystal structure of MamP soaked with iron(II)
Descriptor: HEME C, MamP
Authors:Siponen, M, Pignol, D, Arnoux, P.
Deposit date:2013-03-07
Release date:2013-10-09
Last modified:2018-10-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insight into magnetochrome-mediated magnetite biomineralization.
Nature, 502, 2013
1GMB
DownloadVisualize
BU of 1gmb by Molmil
Reduced structure of CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 at pH 7.6
Descriptor: CYTOCHROME C3, HEME C, SULFATE ION
Authors:Bento, I, Louro, R, Matias, P.M, Catarino, T, Baptista, A.M, Soares, C.M, Carrondo, M.A, Turner, D.L, Xavier, A.V.
Deposit date:2001-09-12
Release date:2002-09-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Component in the Coupled Transfer of Multiple Electrons and Protons in a Monomeric Tetraheme Cytochrome
J.Biol.Chem., 276, 2001
1LEJ
DownloadVisualize
BU of 1lej by Molmil
NMR Structure of a 1:1 Complex of Polyamide (Im-Py-Beta-Im-Beta-Im-Py-Beta-Dp) with the Tridecamer DNA Duplex 5'-CCAAAGAGAAGCG-3'
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*AP*GP*AP*AP*GP*CP*G)-3', 5'-D(*CP*GP*CP*TP*TP*CP*TP*CP*TP*TP*TP*GP*G)-3', IMIDAZOLE-PYRROLE-BETA ALANINE-IMIDAZOLE-BETA ALANINE-IMIDAZOLE-PYRROLE-BETA ALANINE-DIMETHYLAMINO PROPYLAMIDE
Authors:Urbach, A.R, Love, J.J, Ross, S.A, Dervan, P.B.
Deposit date:2002-04-09
Release date:2002-05-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of a beta-alanine-linked polyamide bound to a full helical turn of purine tract DNA in the 1:1 motif.
J.Mol.Biol., 320, 2002
1Q8M
DownloadVisualize
BU of 1q8m by Molmil
Crystal structure of the human myeloid cell activating receptor TREM-1
Descriptor: GLUTATHIONE, SULFATE ION, triggering receptor expressed on myeloid cells 1
Authors:Radaev, S, Kattah, M, Rostro, B, Colonna, M, Sun, P.D.
Deposit date:2003-08-21
Release date:2003-12-09
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the human myeloid cell activating receptor TREM-1
Structure, 11, 2003
3BHH
DownloadVisualize
BU of 3bhh by Molmil
Crystal structure of human calcium/calmodulin-dependent protein kinase IIB isoform 1 (CAMK2B)
Descriptor: Calcium/calmodulin-dependent protein kinase type II beta chain, [4-({4-[(5-cyclopropyl-1H-pyrazol-3-yl)amino]-6-(methylamino)pyrimidin-2-yl}amino)phenyl]acetonitrile
Authors:Filippakopoulos, P, Rellos, P, Niesen, F, Burgess, N, Bullock, A, Berridge, G, Pike, A.C.W, Ugochukwu, E, Pilka, E.S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2007-11-28
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Human Calcium/Calmodulin-Dependent Protein Kinase IIB Isoform 1 (CAMK2B).
To be Published
7XTW
DownloadVisualize
BU of 7xtw by Molmil
The structure of IsPETase in complex with MHET
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-hydroxyethyloxycarbonyl)benzoic acid, GLYCEROL, ...
Authors:Yang, Y, Jiang, P.C, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2022-05-18
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Complete bio-degradation of poly(butylene adipate-co-terephthalate) via engineered cutinases.
Nat Commun, 14, 2023
1XP7
DownloadVisualize
BU of 1xp7 by Molmil
HIV-1 subtype F genomic RNA Dimerization Initiation Site
Descriptor: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SODIUM ION, ...
Authors:Ennifar, E, Dumas, P.
Deposit date:2004-10-08
Release date:2005-10-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies
J.Mol.Biol., 356, 2006
7XTR
DownloadVisualize
BU of 7xtr by Molmil
The apo structure of the engineered TfCut
Descriptor: GLYCEROL, LITHIUM ION, SULFATE ION, ...
Authors:Yang, Y, Jiang, P.C, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2022-05-18
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Complete bio-degradation of poly(butylene adipate-co-terephthalate) via engineered cutinases.
Nat Commun, 14, 2023
7XTS
DownloadVisualize
BU of 7xts by Molmil
The apo structure of the engineered TfCut S130A
Descriptor: SODIUM ION, alpha/beta hydrolase
Authors:Yang, Y, Jiang, P.C, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2022-05-18
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Complete bio-degradation of poly(butylene adipate-co-terephthalate) via engineered cutinases.
Nat Commun, 14, 2023
1XPF
DownloadVisualize
BU of 1xpf by Molmil
HIV-1 subtype A genomic RNA Dimerization Initiation Site
Descriptor: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SODIUM ION, ...
Authors:Ennifar, E, Dumas, P.
Deposit date:2004-10-08
Release date:2005-10-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies
J.Mol.Biol., 356, 2006
4JT4
DownloadVisualize
BU of 4jt4 by Molmil
Structure of Clostridium thermocellum polynucleotide kinase bound to dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase, ...
Authors:Das, U, Wang, L.K, Smith, P, Shuman, S.
Deposit date:2013-03-22
Release date:2013-08-28
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system.
Biochemistry, 52, 2013
7MFG
DownloadVisualize
BU of 7mfg by Molmil
Cryo-EM structure of the VRC310 clinical trial, vaccine-elicited, human antibody 310-030-1D06 Fab in complex with an H1 NC99 HA trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 310-030-1D06 Heavy, 310-030-1D06 Light, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2021-04-09
Release date:2021-11-03
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:A single residue in influenza virus H2 hemagglutinin enhances the breadth of the B cell response elicited by H2 vaccination.
Nat Med, 28, 2022
7YJM
DownloadVisualize
BU of 7yjm by Molmil
Cryo-EM structure of the monomeric atSPT-ORM1 complex
Descriptor: Long chain base biosynthesis protein 2a, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ORMDL family protein, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
3KJM
DownloadVisualize
BU of 3kjm by Molmil
Leu492Ala mutant of Maize cytokinin oxidase/dehydrogenase complexed with phenylurea inhibitor CPPU
Descriptor: 1-(2-chloropyridin-4-yl)-3-phenylurea, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kopecny, D, Briozzo, P.
Deposit date:2009-11-03
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
Biochimie, 92, 2010
2ZUG
DownloadVisualize
BU of 2zug by Molmil
Crystal structure of WSSV ICP11
Descriptor: ORF115 (WSSV285) (Wsv230)
Authors:Wang, A.H.-J, Wang, H.-C, Ko, T.-P, Lo, C.-F.
Deposit date:2008-10-17
Release date:2008-12-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly
Proc.Natl.Acad.Sci.USA, 105, 2008
3KK8
DownloadVisualize
BU of 3kk8 by Molmil
CaMKII Substrate Complex A
Descriptor: Calcium/calmodulin dependent protein kinase II, MAGNESIUM ION
Authors:Kuriyan, J, Chao, L.H, Pellicena, P, Deindl, S, Barclay, L.A, Schulman, H.
Deposit date:2009-11-04
Release date:2010-02-09
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation.
Nat.Struct.Mol.Biol., 17, 2010
1XTU
DownloadVisualize
BU of 1xtu by Molmil
Sulfolobus solfataricus uracil phosphoribosyltransferase in complex with uridine 5'-monophosphate (UMP) and cytidine 5'-triphosphate (CTP)
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Probable uracil phosphoribosyltransferase, URIDINE-5'-MONOPHOSPHATE
Authors:Arent, S, Harris, P, Jensen, K.F, Larsen, S.
Deposit date:2004-10-24
Release date:2005-02-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Allosteric Regulation and Communication between Subunits in Uracil Phosphoribosyltransferase from Sulfolobus solfataricus(,)
Biochemistry, 44, 2005
7YJO
DownloadVisualize
BU of 7yjo by Molmil
Cryo-EM structure of the monomeric atSPT-ORM1 (LCB2a-deltaN5) complex
Descriptor: Long chain base biosynthesis protein 2a, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ORMDL family protein, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
7XTT
DownloadVisualize
BU of 7xtt by Molmil
The structure of engineered TfCut S130A in complex with MHET
Descriptor: 1,2-ETHANEDIOL, 4-(2-hydroxyethyloxycarbonyl)benzoic acid, SODIUM ION, ...
Authors:Yang, Y, Jiang, P.C, Huang, J.W, Chen, C.-C, Guo, R.-T.
Deposit date:2022-05-18
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Complete bio-degradation of poly(butylene adipate-co-terephthalate) via engineered cutinases.
Nat Commun, 14, 2023
1TK4
DownloadVisualize
BU of 1tk4 by Molmil
Crystal structure of russells viper phospholipase A2 in complex with a specifically designed tetrapeptide Ala-Ile-Arg-Ser at 1.1 A resolution
Descriptor: Phospholipase A2 VRV-PL-VIIIa, SULFATE ION, Tetrapeptide Ala-Ile-Arg-Ser
Authors:Singh, N, Bilgrami, S, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Kaur, P, Singh, T.P.
Deposit date:2004-06-08
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of russells viper phospholipase A2 with a specifically designed tetrapeptide Ala-Ile-Arg-Ser at 1.1 A resolution
TO BE PUBLISHED
1T8D
DownloadVisualize
BU of 1t8d by Molmil
Structure of the C-type lectin domain of CD23
Descriptor: Low affinity immunoglobulin epsilon Fc receptor
Authors:Hibbert, R.G, Teriete, P, Grundy, G.J, Sutton, B.J, Gould, H.J, McDonnell, J.M.
Deposit date:2004-05-12
Release date:2005-07-26
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:The structure of human CD23 and its interactions with IgE and CD21
J.Exp.Med., 202, 2005
7YJN
DownloadVisualize
BU of 7yjn by Molmil
Cryo-EM structure of the monomeric atSPT-ORM1 (ORM1-N17A) complex
Descriptor: Long chain base biosynthesis protein 1, Long chain base biosynthesis protein 2a, ORMDL family protein, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
7YJK
DownloadVisualize
BU of 7yjk by Molmil
Cryo-EM structure of the dimeric atSPT-ORM1 complex
Descriptor: Long chain base biosynthesis protein 1, Long chain base biosynthesis protein 2a, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
1TJW
DownloadVisualize
BU of 1tjw by Molmil
Crystal Structure of T161D Duck Delta 2 Crystallin Mutant with bound argininosuccinate
Descriptor: ARGININOSUCCINATE, Delta crystallin II
Authors:Sampaleanu, L.M, Codding, P.W, Lobsanov, Y.D, Tsai, M, Smith, G.D, Horvatin, C, Howell, P.L.
Deposit date:2004-06-07
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies of duck delta2 crystallin mutants provide insight into the role of Thr161 and the 280s loop in catalysis
Biochem.J., 384, 2004

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon