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PDB: 7397 件

6IBD
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The Phosphatase and C2 domains of Human SHIP1
分子名称: Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
著者Bradshaw, W.J, Williams, E.P, Fernandez-Cid, A, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
登録日2018-11-29
公開日2019-01-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 2024
6IJF
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Crystal structure of the type VI effector-immunity complex (Tae4-Tai4) from Agrobacterium tumefaciens
分子名称: PENTAETHYLENE GLYCOL, SULFATE ION, Tae4, ...
著者Fukuhara, S, Nakane, T, Yamashita, K, Ishii, R, Ishitani, R, Nureki, O.
登録日2018-10-09
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex.
Acta Crystallogr F Struct Biol Commun, 74, 2018
3VVO
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Crystal structure of MATE in the bent conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.504 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
6IAU
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Amine Dehydrogenase from Cystobacter fuscus in complex with NADP+ and cyclohexylamine
分子名称: Amine Dehydrogenase, CYCLOHEXYLAMMONIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Beloti, L, Mayol, O, Turkenburg, J.P, Vaxelaire-Vergne, C, Grogan, G.
登録日2018-11-27
公開日2019-03-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献A family of native amine dehydrogenases for the asymmetric reductive amination of ketones
Nat Catal, 2019
6IRZ
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Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH and m7G-capped RNA
分子名称: 1,2-ETHANEDIOL, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, PDX1 C-terminal-inhibiting factor 1, ...
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2018-11-15
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6IU5
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Crystal structure of cytoplasmic metal binding domain with zinc ions
分子名称: CHLORIDE ION, VIT1, ZINC ION
著者Kato, T, Nishizawa, T, Yamashita, K, Kumazaki, K, Ishitani, R, Nureki, O.
登録日2018-11-27
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of plant vacuolar iron transporter VIT1.
Nat Plants, 5, 2019
6I2T
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CryoEM reconstruction of full-length, fully-glycosylated human butyrylcholinesterase tetramer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cholinesterase, lamellipodin-derived polyproline peptide
著者Leung, M.R, van Bezouwen, L.S, Schopfer, L.M, Sussman, J.L, Silman, I, Lockridge, O, Zeev-Ben-Mordehai, T.
登録日2018-11-01
公開日2018-12-19
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Cryo-EM structure of the native butyrylcholinesterase tetramer reveals a dimer of dimers stabilized by a superhelical assembly.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6IAQ
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Structure of Amine Dehydrogenase from Mycobacterium smegmatis
分子名称: 1,2-ETHANEDIOL, Dihydrodipicolinate reductase N-terminus domain-containing protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Grogan, G, Vaxelaire-Vergne, C, Beloti, L, Mayol, O.
登録日2018-11-27
公開日2019-03-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献A family of native amine dehydrogenases for the asymmetric reductive amination of ketones
Nat Catal, 2019
6I5B
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Crystal Structure of Outer Cell Wall Cytochrome OcwA
分子名称: (R,R)-2,3-BUTANEDIOL, CHLORIDE ION, HEME C, ...
著者Hermann, B, Einsle, O.
登録日2018-11-13
公開日2019-09-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献How Thermophilic Gram-Positive Organisms Perform Extracellular Electron Transfer: Characterization of the Cell Surface Terminal Reductase OcwA.
Mbio, 10, 2019
6IRV
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Crystal structure of the human cap-specific adenosine methyltransferase
分子名称: Phosphorylated CTD-interacting factor 1
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2018-11-14
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6IU4
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Crystal structure of iron transporter VIT1 with cobalt ion
分子名称: COBALT (II) ION, VIT1, ZINC ION
著者Kato, T, Nishizawa, T, Yamashita, K, Taniguchi, R, Kumazaki, K, Ishitani, R, Nureki, O.
登録日2018-11-27
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of plant vacuolar iron transporter VIT1.
Nat Plants, 5, 2019
3VUY
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Crystal structure of A20 ZF7 in complex with linear tetraubiquitin
分子名称: POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-07-09
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation
Embo J., 31, 2012
3V8F
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Crystal structure of crosslinked GltPh V216C-M385C mutant
分子名称: ASPARTIC ACID, MERCURY (II) ION, SODIUM ION, ...
著者Verdon, G, Boudker, O.
登録日2011-12-22
公開日2012-02-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Crystal structure of an asymmetric trimer of a bacterial glutamate transporter homolog.
Nat.Struct.Mol.Biol., 19, 2012
6IDS
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Crystal structure of Vibrio cholerae MATE transporter VcmN D35N mutant
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
6IS0
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Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH and m7G-capped RNA
分子名称: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, ...
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2018-11-15
公開日2018-12-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6IU8
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Crystal structure of cytoplasmic metal binding domain with cobalt ions
分子名称: COBALT (II) ION, VIT1, ZINC ION
著者Kato, T, Nishizawa, T, Yamashita, K, Kumazaki, K, Ishitani, R, Nureki, O.
登録日2018-11-27
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of plant vacuolar iron transporter VIT1.
Nat Plants, 5, 2019
3UDZ
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Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with ADP and IP6.
分子名称: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Inositol pentakisphosphate 2-kinase, ...
著者Gosein, V, Leung, T.-F, Krajden, O, Miller, G.J.
登録日2011-10-28
公開日2012-03-14
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Inositol phosphate-induced stabilization of inositol 1,3,4,5,6-pentakisphosphate 2-kinase and its role in substrate specificity.
Protein Sci., 21, 2012
3UFZ
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Crystal structure of a Trp-less green fluorescent protein translated by the universal genetic code
分子名称: Green fluorescent protein
著者Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D.
登録日2011-11-02
公開日2012-10-17
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Simplification of the genetic code: restricted diversity of genetically encoded amino acids.
Nucleic Acids Res., 40, 2012
3VUX
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Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II
分子名称: 1,2-ETHANEDIOL, POTASSIUM ION, Polyubiquitin-C, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-07-09
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation
Embo J., 31, 2012
3VVN
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Crystal structure of MATE in the straight conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VW6
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Crystal structure of human apoptosis signal-regulating kinase 1 (ASK1) with imidazopyridine inhibitor
分子名称: 4-tert-butyl-N-[6-(1H-imidazol-1-yl)imidazo[1,2-a]pyridin-2-yl]benzamide, Mitogen-activated protein kinase kinase kinase 5
著者Terao, Y, Suzuki, H, Yoshikawa, M, Yashiro, H, Takekawa, S, Fujitani, Y, Okada, K, Inoue, Y, Yamamoto, Y, Nakagawa, H, Yao, S, Kawamoto, T, Uchikawa, O.
登録日2012-08-06
公開日2012-10-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design and biological evaluation of imidazo[1,2-a]pyridines as novel and potent ASK1 inhibitors.
Bioorg. Med. Chem. Lett., 22, 2012
3W8M
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Crystal Structure of HasAp with Iron Salophen
分子名称: 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE)]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON, Heme acquisition protein HasAp
著者Shirataki, C, Shoji, O, Sugimoto, H, Shiro, Y, Watanabe, Y.
登録日2013-03-19
公開日2014-01-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014
3W8O
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Crystal Structure of HasAp with Iron Phthalocyanine
分子名称: Heme acquisition protein HasAp, [29H,31H-phthalocyaninato(2-)-kappa~4~N~29~,N~30~,N~31~,N~32~]iron
著者Shirataki, C, Shoji, O, Terada, M, Sugimoto, H, Shiro, Y, Watanabe, Y.
登録日2013-03-20
公開日2014-01-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014
3TN0
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Structure of mouse Va14Vb8.2NKT TCR-mouse CD1d-a-C-Galactosylceramide complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Patel, O, Rossjohn, J.
登録日2011-09-01
公開日2011-12-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献NKT TCR Recognition of CD1d-{alpha}-C-Galactosylceramide.
J.Immunol., 187, 2011
3T2X
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Structure of shwanavidin low affinity mutant (F43A)
分子名称: Avidin/streptavidin
著者Livnah, O, Meir, A.
登録日2011-07-23
公開日2012-04-11
最終更新日2012-06-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural Adaptation of a Thermostable Biotin-binding Protein in a Psychrophilic Environment.
J.Biol.Chem., 287, 2012

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件を2024-08-07に公開中

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