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PDB: 7462 results

1VTH
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DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGTACA) COMPLEXED WITH DAUNOMYCIN
Descriptor: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
Deposit date:1992-03-01
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
5WM8
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Structure of the 10R (+)-cis-BP-dG modified Rev1 ternary complex
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Rechkoblit, O, Kolbanovsky, A, Landes, H, Geacintov, N.E, Aggarwal, A.K.
Deposit date:2017-07-28
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Mechanism of error-free replication across benzo[a]pyrene stereoisomers by Rev1 DNA polymerase.
Nat Commun, 8, 2017
3ZJC
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Crystal structure of GMPPNP-bound human GIMAP7 L100Q variant
Descriptor: GTPASE IMAP FAMILY MEMBER 7, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Schwefel, D, Daumke, O.
Deposit date:2013-01-17
Release date:2013-03-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural Insights Into the Mechanism of Gtpase Activation in the Gimap Family.
Structure, 21, 2013
2E80
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Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound substrate nitrite
Descriptor: ACETATE ION, CALCIUM ION, Cytochrome c-552, ...
Authors:Einsle, O, Kroneck, P.M.H.
Deposit date:2007-01-15
Release date:2007-01-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanism of the six-electron reduction of nitrite to ammonia by cytochrome c nitrite reductase
J.Am.Chem.Soc., 124, 2002
5Y0B
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PIG GASTRIC H+,K+ - ATPASE IN COMPLEX with BYK99
Descriptor: Potassium-transporting ATPase alpha chain 1, Potassium-transporting ATPase subunit beta
Authors:Abe, K, Shimokawa, J, Natio, M, Munson, K, Vagin, O, Sachs, G, Suzuki, H, Tani, K, Fujiyoshi, Y.
Deposit date:2017-07-16
Release date:2017-08-09
Method:ELECTRON CRYSTALLOGRAPHY (6.7 Å)
Cite:The cryo-EM structure of gastric H(+),K(+)-ATPase with bound BYK99, a high-affinity member of K(+)-competitive, imidazo[1,2-a]pyridine inhibitors
Sci Rep, 7, 2017
5WZZ
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The SIAH E3 ubiquitin ligases promote Wnt/ beta-catenin signaling through mediating Wnt-induced Axin degradation
Descriptor: Axin-1, E3 ubiquitin-protein ligase SIAH1, ZINC ION
Authors:Ji, L, Jiang, B, Jiang, X, Charlat, O, Chen, A, Mickanin, C, Bauer, A, Xu, W, Yan, X.-X, Cong, F.
Deposit date:2017-01-19
Release date:2017-08-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:The SIAH E3 ubiquitin ligases promote Wnt/ beta-catenin signaling through mediating Wnt-induced Axin degradation
Genes Dev., 31, 2017
1OWW
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Solution structure of the first type III module of human fibronectin determined by 1H, 15N NMR spectroscopy
Descriptor: Fibronectin first type III module
Authors:Gao, M, Craig, D, Lequin, O, Campbell, I.D, Vogel, V, Schulten, K.
Deposit date:2003-03-31
Release date:2003-10-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and functional significance of mechanically unfolded fibronectin type III1 intermediates
Proc.Natl.Acad.Sci.USA, 100, 2003
1OPK
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Structural basis for the auto-inhibition of c-Abl tyrosine kinase
Descriptor: 6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE, GLYCEROL, MYRISTIC ACID, ...
Authors:Nagar, B, Hantschel, O, Young, M.A, Scheffzek, K, Veach, D, Bornmann, W, Clarkson, B, Superti-Furga, G, Kuriyan, J.
Deposit date:2003-03-06
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the autoinhibition of c-Abl tyrosine kinase
Cell(Cambridge,Mass.), 112, 2003
1OGH
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Structure of the bifunctional dCTP deaminase-dUTPase from Methanocaldococcus jannaschii
Descriptor: BIFUNCTIONAL DEAMINASE/DIPHOSPHATASE
Authors:Johansson, E, Bjornberg, O, Nyman, P.O, Larsen, S.
Deposit date:2003-05-02
Release date:2003-06-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of the Bifunctional Dctp Deaminase-Dutpase from Methanocaldococcus Jannaschii and its Relation to Other Homotrimeric Dutpases
J.Biol.Chem., 278, 2003
1OPJ
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Structural basis for the auto-inhibition of c-Abl tyrosine kinase
Descriptor: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, CHLORIDE ION, MYRISTIC ACID, ...
Authors:Nagar, B, Hantschel, O, Young, M.A, Scheffzek, K, Veach, D, Bornmann, W, Clarkson, B, Superti-Furga, G, Kuriyan, J.
Deposit date:2003-03-06
Release date:2003-04-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for the autoinhibition of c-Abl tyrosine kinase
Cell(Cambridge,Mass.), 112, 2003
5XH6
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Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RVR variant in complex with crRNA and target DNA (TATA PAM)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
Authors:Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
Deposit date:2017-04-19
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
5XIE
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BU of 5xie by Molmil
Crystal Structure of HasAp with 5-ethynyl-10,20-diphenylporphyrin
Descriptor: 5-Ethynyl-10,20-diphenylporphyrin containing FE, Heme acquisition protein HasAp
Authors:Shoji, O, Uehara, H, Sugimoto, H, Shiro, Y, Watanabe, Y.
Deposit date:2017-04-26
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of the Heme Acquisition Protein HasA with Iron(III)-5,15-Diphenylporphyrin and Derivatives Thereof as an Artificial Prosthetic Group
Angew. Chem. Int. Ed. Engl., 56, 2017
5XHL
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Crystal Structure of HasAp with Gallium Phthalocyanine
Descriptor: Heme acquisition protein HasAp, Phthalocyanine containing GA
Authors:Shoji, O, Shisaka, Y, Iwai, Y, Sugimoto, H, Shiro, Y, Watanabe, Y.
Deposit date:2017-04-21
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of HasAp with Gallium Phthalocyanine
to be published
3UG9
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BU of 3ug9 by Molmil
Crystal Structure of the Closed State of Channelrhodopsin
Descriptor: Archaeal-type opsin 1, Archaeal-type opsin 2, OLEIC ACID, ...
Authors:Kato, H.E, Ishitani, R, Nureki, O.
Deposit date:2011-11-02
Release date:2012-01-25
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the channelrhodopsin light-gated cation channel
Nature, 482, 2012
1O91
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BU of 1o91 by Molmil
Crystal Structure of a Collagen VIII NC1 Domain Trimer
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, COLLAGEN ALPHA 1(VIII) CHAIN, SULFATE ION
Authors:Kvansakul, M, Bogin, O, Hohenester, E, Yayon, A.
Deposit date:2002-12-10
Release date:2003-11-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Collagen Alpha1(Viii) Nc1 Trimer.
Matrix Biol., 22, 2003
1VTI
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BU of 1vti by Molmil
DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGATCA) COMPLEXED WITH DAUNOMYCIN
Descriptor: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
Deposit date:1992-03-01
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
5WIF
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BU of 5wif by Molmil
Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, BORIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Shatsman, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-07-19
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis
To Be Published
1O17
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BU of 1o17 by Molmil
ANTHRANILATE PHOSPHORIBOSYL-TRANSFERASE (TRPD)
Descriptor: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
Authors:Mayans, O, Ivens, A, Kirschner, K, Wilmanns, M.
Deposit date:2002-10-29
Release date:2002-11-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural analysis of two enzymes catalysing reverse metabolic reactions implies common ancestry
Embo J., 21, 2002
2C6W
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PENICILLIN-BINDING PROTEIN 1A (PBP-1A) FROM STREPTOCOCCUS PNEUMONIAE
Descriptor: CHLORIDE ION, PENICILLIN-BINDING PROTEIN 1A, ZINC ION
Authors:Contreras-Martel, C, Job, V, Di Guilmi, A.-M, Vernet, T, Dideberg, O, Dessen, A.
Deposit date:2005-11-14
Release date:2005-12-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal Structure of Penicillin-Binding Protein 1A (Pbp1A) Reveals a Mutational Hotspot Implicated in Beta-Lactam Resistance in Streptococcus Pneumoniae.
J.Mol.Biol., 355, 2006
1VJ4
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SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C)
Descriptor: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'
Authors:Shakked, Z, Rabinovich, D, Kennard, O, Cruse, W.B, Salisbury, S.A, Viswamitra, M.A.
Deposit date:1989-01-11
Release date:1989-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sequence-dependent conformation of an A-DNA double helix: The crystal structure of the octamer d(G-G-T-A-T-A-C-C)
J.Mol.Biol., 166, 1983
2FM6
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Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (native form)
Descriptor: GLYCEROL, Metallo-beta-lactamase L1, SULFATE ION, ...
Authors:Nauton, L, Garau, G, Kahn, R, Dideberg, O.
Deposit date:2006-01-07
Release date:2007-01-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural insights into the design of inhibitors for the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia.
J.Mol.Biol., 375, 2008
2FU9
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BU of 2fu9 by Molmil
Zinc-beta-lactamase L1 from stenotrophomonas maltophilia (mp2 inhibitor complex)
Descriptor: GLYCEROL, Metallo-beta-lactamase L1, N-[(BENZYLOXY)CARBONYL]-L-CYSTEINYLGLYCINE, ...
Authors:Nauton, L, Garau, G, Kahn, R, Dideberg, O.
Deposit date:2006-01-26
Release date:2007-01-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the design of inhibitors for the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia.
J.Mol.Biol., 375, 2008
6GEL
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BU of 6gel by Molmil
The structure of TWITCH-2B
Descriptor: CALCIUM ION, FORMIC ACID, GLYCEROL, ...
Authors:Trigo Mourino, P, Paulat, M, Thestrup, T, Griesbeck, O, Griesinger, C, Becker, S.
Deposit date:2018-04-26
Release date:2019-08-21
Last modified:2019-09-11
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Dynamic tuning of FRET in a green fluorescent protein biosensor.
Sci Adv, 5, 2019
5WI5
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BU of 5wi5 by Molmil
2.0 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Streptococcus pneumoniae in Complex with Uridine-diphosphate-2(n-acetylglucosaminyl) butyric acid, (2R)-2-(phosphonooxy)propanoic acid and Magnesium.
Descriptor: (2R)-2-(phosphonooxy)propanoic acid, MAGNESIUM ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Kiryukhina, O, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-07-18
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.0 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Streptococcus pneumoniae in Complex with Uridine-diphosphate-2(n-acetylglucosaminyl) butyric acid, (2R)-2-(phosphonooxy)propanoic acid and Magnesium.
To Be Published
5WM1
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Structure of the 10S (+)-trans-BP-dG modified Rev1 ternary complex
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Rechkoblit, O, Kolbanovsky, A, Landes, H, Geacintov, N.E, Aggarwal, A.K.
Deposit date:2017-07-28
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of error-free replication across benzo[a]pyrene stereoisomers by Rev1 DNA polymerase.
Nat Commun, 8, 2017

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