Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 296 件

8CH5
DownloadVisualize
BU of 8ch5 by Molmil
Cryo-EM structure of the fd bacteriophage capsid major coat protein pVIII
分子名称: Major capsid protein pVIII
著者Boehning, J, Bharat, T.A.M.
登録日2023-02-07
公開日2023-12-20
最終更新日2024-01-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Biophysical basis of filamentous phage tactoid-mediated antibiotic tolerance in P. aeruginosa.
Nat Commun, 14, 2023
3LWB
DownloadVisualize
BU of 3lwb by Molmil
Crystal Structure of apo D-alanine:D-alanine Ligase (Ddl) from Mycobacterium tuberculosis
分子名称: D-alanine--D-alanine ligase, NITRATE ION
著者Bruning, J.B, Murillo, A.C, Chacon, O, Barletta, R.G, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2010-02-23
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the Mycobacterium tuberculosis D-Alanine:D-Alanine Ligase, a Target of the Antituberculosis Drug D-Cycloserine.
Antimicrob.Agents Chemother., 55, 2011
6VEB
DownloadVisualize
BU of 6veb by Molmil
Precorrin-2-bound S128A S. typhimurium siroheme synthase
分子名称: 3,3',3'',3'''-[(7S,8S,12S,13S)-3,8,13,17-tetrakis(carboxymethyl)-8,13-dimethyl-7,8,12,13,20,24-hexahydroporphyrin-2,7,1 2,18-tetrayl]tetrapropanoic acid, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Pennington, J.M, Stroupe, M.E.
登録日2019-12-31
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
3OS8
DownloadVisualize
BU of 3os8 by Molmil
Estrogen Receptor
分子名称: 4-[1-benzyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
著者Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2021-10-06
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3OSA
DownloadVisualize
BU of 3osa by Molmil
Estrogen Receptor
分子名称: 4-[1-(3-methylbut-2-en-1-yl)-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
著者Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.296 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3OS9
DownloadVisualize
BU of 3os9 by Molmil
Estrogen Receptor
分子名称: 4-[1-allyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
著者Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3Q0J
DownloadVisualize
BU of 3q0j by Molmil
Crystal Structure of the Mycobacterium tuberculosis Crotonase in complex with the Inhibitor AcetoacetylCoA
分子名称: ACETOACETYL-COENZYME A, enoyl-CoA hydratase echA8
著者Bruning, J.B, Delgado, E, Ghosh, S, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2010-12-15
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure and Mechanism of the Prokaryotic Crotonase
To be Published
3Q0G
DownloadVisualize
BU of 3q0g by Molmil
Crystal Structure of the Mycobacterium tuberculosis Crotonase Bound to a Reaction Intermediate Derived from Crotonyl CoA
分子名称: Butyryl Coenzyme A, COENZYME A, GLYCEROL, ...
著者Bruning, J.B, Delgado, E, Ghosh, S, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2010-12-15
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal Structure of the Prokaryotic Crotonase
To be Published
3PZK
DownloadVisualize
BU of 3pzk by Molmil
Crystal Structure of the Mycobacterium tuberculosis crotonase in apo form
分子名称: SULFATE ION, e enoyl-CoA hydratase echA8
著者Bruning, J.B, Delgado, E, Ghosh, S, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2010-12-14
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2303 Å)
主引用文献Crystal Structure of the Prokaryotic Crotonase
To be Published
4ZO1
DownloadVisualize
BU of 4zo1 by Molmil
Crystal Structure of the T3-bound TR-beta Ligand-binding Domain in complex with RXR-alpha
分子名称: 3,5,3'TRIIODOTHYRONINE, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha, ...
著者Bruning, J.B, Kojetin, D.J, Matta-Camacho, E, Hughes, T.S, Srinivasan, S, Nwachukwu, J.C, Cavett, V, Nowak, J, Chalmers, M.J, Marciano, D.P, Kamenecka, T.M, Rance, M, Shulman, A.I, Mangelsdorf, D.J, Griffin, P.R, Nettles, K.W.
登録日2015-05-05
公開日2015-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.221 Å)
主引用文献Structural mechanism for signal transduction in RXR nuclear receptor heterodimers.
Nat Commun, 6, 2015
6P59
DownloadVisualize
BU of 6p59 by Molmil
Crystal structure of SIVrcm Vif-CBFbeta-ELOB-ELOC complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Core-binding factor subunit beta, Elongin-B, ...
著者Binning, J.M, Chesarino, N.M, Emerman, M, Gross, J.D.
登録日2019-05-29
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.942214 Å)
主引用文献Structural Basis for a Species-Specific Determinant of an SIV Vif Protein toward Hominid APOBEC3G Antagonism.
Cell Host Microbe, 26, 2019
6CBI
DownloadVisualize
BU of 6cbi by Molmil
PCNA in complex with inhibitor
分子名称: GLY-ARG-LYS-ARG-ARG-GLN-DAB-SER-MET-THR-GLU-PHE-TYR-HIS, Proliferating cell nuclear antigen, SULFATE ION
著者Bruning, J.B, Wegener, K.L.
登録日2018-02-03
公開日2018-07-04
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
5TUP
DownloadVisualize
BU of 5tup by Molmil
X-ray Crystal Structure of the Aspergillus fumigatus Sliding Clamp
分子名称: Proliferating cell nuclear antigen
著者Bruning, J.B, Marshall, A.C, Kroker, A.J, Wegener, K.L, Rajapaksha, H.
登録日2016-11-06
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Structure of the sliding clamp from the fungal pathogen Aspergillus fumigatus (AfumPCNA) and interactions with Human p21.
FEBS J., 284, 2017
6DDA
DownloadVisualize
BU of 6dda by Molmil
Nurr1 Covalently Modified by a Dopamine Metabolite
分子名称: 5-hydroxy-1,2-dihydro-6H-indol-6-one, BROMIDE ION, Nuclear receptor subfamily 4 group A member 2, ...
著者Bruning, J.M, Wang, Y, Otrabella, F, Boxue, T, Liu, H, Bhattacharya, P, Guo, S, Holton, J.M, Fletterick, R.J, Jacobson, M.P, England, P.M.
登録日2018-05-09
公開日2019-03-20
最終更新日2019-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Covalent Modification and Regulation of the Nuclear Receptor Nurr1 by a Dopamine Metabolite.
Cell Chem Biol, 26, 2019
8AUR
DownloadVisualize
BU of 8aur by Molmil
Cryo-EM structure of a TasA fibre
分子名称: Major biofilm matrix component
著者Boehning, J, Bharat, T.A.M.
登録日2022-08-25
公開日2022-11-30
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Donor-strand exchange drives assembly of the TasA scaffold in Bacillus subtilis biofilms.
Nat Commun, 13, 2022
6PR2
DownloadVisualize
BU of 6pr2 by Molmil
R261A/S128A S. typhimurium siroheme synthase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Pennington, J.M, Stroupe, M.E.
登録日2019-07-10
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
6P5Z
DownloadVisualize
BU of 6p5z by Molmil
Cobalt-sirohydrochlorin-bound S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase, ...
著者Pennington, J.M, Stroupe, M.E.
登録日2019-05-31
公開日2021-06-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
5TTO
DownloadVisualize
BU of 5tto by Molmil
X-ray crystal structure of PPARgamma in complex with SR1643
分子名称: 4-bromo-N-{3,5-dichloro-4-[(quinolin-3-yl)oxy]phenyl}-2,5-difluorobenzene-1-sulfonamide, Peroxisome proliferator-activated receptor gamma
著者Bruning, J.B, Frkic, R.L, Griffin, P, Kamenecka, T, Abell, A.
登録日2016-11-04
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.246 Å)
主引用文献Structure-Activity Relationship of 2,4-Dichloro-N-(3,5-dichloro-4-(quinolin-3-yloxy)phenyl)benzenesulfonamide (INT131) Analogs for PPAR gamma-Targeted Antidiabetics.
J. Med. Chem., 60, 2017
7PAB
DownloadVisualize
BU of 7pab by Molmil
Varicella zoster Orf24-Orf27 nuclear egress complex
分子名称: Nuclear egress protein 2,Nuclear egress protein 1, SULFATE ION, ZINC ION
著者Schweininger, J, Muller, Y.A.
登録日2021-07-29
公開日2022-01-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of the varicella-zoster Orf24-Orf27 nuclear egress complex spotlights multiple determinants of herpesvirus subfamily specificity.
J.Biol.Chem., 298, 2022
8CIO
DownloadVisualize
BU of 8cio by Molmil
Cryo-EM structure of the CupE pilus from Pseudomonas aeruginosa
分子名称: SCPU domain-containing protein
著者Boehning, J, Bharat, T.A.M.
登録日2023-02-10
公開日2023-03-22
最終更新日2023-04-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Architecture of the biofilm-associated archaic Chaperone-Usher pilus CupE from Pseudomonas aeruginosa.
Plos Pathog., 19, 2023
6PR4
DownloadVisualize
BU of 6pr4 by Molmil
D262N/S128A S. typhimurium siroheme synthase
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-07-10
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
6P7C
DownloadVisualize
BU of 6p7c by Molmil
D104A/S128A S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-06-05
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
6P7D
DownloadVisualize
BU of 6p7d by Molmil
D104N S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-06-05
公開日2020-02-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
5U5L
DownloadVisualize
BU of 5u5l by Molmil
X-ray Crystal Structure of the PPARgamma Ligand Binding Domain in Complex with Rivoglitazone
分子名称: (5S)-5-({4-[(6-methoxy-1-methyl-1H-benzimidazol-2-yl)methoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
著者Bruning, J.B, Rajapaksha, H, Wegener, K, Bhatia, H.
登録日2016-12-06
公開日2017-08-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献X-ray crystal structure of rivoglitazone bound to PPAR gamma and PPAR subtype selectivity of TZDs.
Biochim. Biophys. Acta, 1861, 2017
6P5X
DownloadVisualize
BU of 6p5x by Molmil
Sirohydrochlorin-bound S. typhimurium siroheme synthase
分子名称: 3,3',3'',3'''-[(7S,8S,12S,13S)-3,8,13,17-tetrakis(carboxymethyl)-8,13-dimethyl-7,8,12,13-tetrahydroporphyrin-2,7,12,18-tetrayl]tetrapropanoic acid, CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Pennington, J.M, Stroupe, M.E.
登録日2019-05-31
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon