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PDB: 17048 件

8WI7
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Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
9EU5
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SSX structure of Autotaxin at room temperature
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7alpha-hydroxycholesterol, CALCIUM ION, ...
著者Eymery, M.C, McCarthy, A.A, Foos, N, Basu, S.
登録日2024-03-27
公開日2024-07-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献In situ serial crystallography facilitates 96-well plate structural analysis at low symmetry.
Iucrj, 2024
8WI8
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Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, bS1 and RafH.
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
8WTQ
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HUMAN SQUALENE SYNTHASE IN COMPLEX WITH {1-[2-Chloro-5-(2,2-dimethyl-propyl)-13-(2-methoxy-phenyl)-6-oxo-6,7,10,11-tetrahydro-5H,9H,13H-12-oxa-5,8-diaza-benzocycloundecene-8-carbonyl]-piperidin-4-yl}-acetic acid
分子名称: 2-[1-[[(10~{S})-13-chloranyl-2-(2,2-dimethylpropyl)-10-(2-methoxyphenyl)-3-oxidanylidene-9-oxa-2,5-diazabicyclo[9.4.0]pentadeca-1(15),11,13-trien-5-yl]carbonyl]piperidin-4-yl]ethanoic acid, PHOSPHATE ION, Squalene synthase
著者Suzuki, M, Haginoya, N, Suzuki, M, Ishigai, Y, Terayama, K, Kanda, A, Sugita, K.
登録日2023-10-19
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Novel 11-Membered Templates as Squalene Synthase Inhibitors.
J.Med.Chem., 67, 2024
8YLB
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Cocrystal structures of agonists compound 1 with HsClpP
分子名称: 5-[(2-methylphenyl)methyl]-11-(phenylmethyl)-2,5,7,11-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),6-dien-8-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
著者Zhao, N, Zhu, Y, Bao, R.
登録日2024-03-06
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Rational Design of a Novel Class of Human ClpP Agonists through a Ring-Opening Strategy with Enhanced Antileukemia Activity.
J.Med.Chem., 67, 2024
8VCZ
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Crystal Structure of KAI2 from Oryza sativa
分子名称: Probable esterase D14L
著者Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
登録日2023-12-14
公開日2024-07-31
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
8VD3
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Crystal Structure of D14 from Arabidopsis thaliana
分子名称: Strigolactone esterase D14
著者Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
登録日2023-12-14
公開日2024-07-31
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
9BBM
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PHF filament generated from 4E-Tau(297-407) under neutral Mg2+ condition
分子名称: Isoform Tau-F of Microtubule-associated protein tau
著者Duan, P, El Mammeri, N.
登録日2024-04-06
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Milligram-scale assembly and NMR fingerprint of tau fibrils adopting the Alzheimer's disease fold.
J.Biol.Chem., 300, 2024
8W8S
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Cryo-EM structure of the AA14-bound GPR101 complex
分子名称: 1-(4-methylpyridin-2-yl)-3-[3-(trifluoromethyl)phenyl]thiourea, Probable G-protein coupled receptor 101
著者Sun, J.P, Yu, X, Gao, N, Yang, F, Wang, J.Y, Yang, Z, Guan, Y, Wang, G.P.
登録日2023-09-04
公開日2024-01-03
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of GPR101-Gs enables identification of ligands with rejuvenating potential.
Nat.Chem.Biol., 20, 2024
8W8R
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Cryo-EM structure of the AA-14-bound GPR101-Gs complex
分子名称: 1-(4-methylpyridin-2-yl)-3-[3-(trifluoromethyl)phenyl]thiourea, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Sun, J.P, Yu, X, Gao, N, Yang, F, Wang, J.Y, Yang, Z, Guan, Y, Wang, G.P.
登録日2023-09-04
公開日2024-01-03
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of GPR101-Gs enables identification of ligands with rejuvenating potential.
Nat.Chem.Biol., 20, 2024
8XI6
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SARS-CoV-2 Omicron BQ.1.1 Variant Spike Protein Complexed with MO11 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ishimaru, H, Nishimura, M, Shigematsu, H, Marini, M.I, Hasegawa, N, Takamiya, R, Iwata, S, Mori, Y.
登録日2023-12-19
公開日2024-04-24
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Epitopes of an antibody that neutralizes a wide range of SARS-CoV-2 variants in a conserved subdomain 1 of the spike protein.
J.Virol., 98, 2024
8WLS
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Bcl-xL in complex with HBx BH3 delta C peptide
分子名称: Bcl-2-like protein 1, Protein X
著者Kobayashi, N, Nagata, T, Kusunoki, H.
登録日2023-10-01
公開日2024-03-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights into the Interaction between the C-Terminal-Deleted BH3-like Motif Peptide of Hepatitis B Virus X Protein and Bcl-x L.
Biochemistry, 63, 2024
8XMN
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Voltage-gated sodium channel Nav1.7 variant M2
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WMS
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BU of 8wms by Molmil
Crystal structure of human DPPA3 in complex with human UHRF1 PHD domain
分子名称: Developmental pluripotency-associated protein 3, E3 ubiquitin-protein ligase UHRF1, ZINC ION
著者Shiraishi, N, Arita, K.
登録日2023-10-04
公開日2024-07-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human DPPA3 in complex with human UHRF1 PHD domain
To Be Published
9ENT
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BU of 9ent by Molmil
SSX structure of Autotaxin in cryogenic conditions
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7alpha-hydroxycholesterol, CALCIUM ION, ...
著者Eymery, M.C, McCarthy, A.A, Foos, N, Basu, S.
登録日2024-03-13
公開日2024-07-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献In situ serial crystallography facilitates 96-well plate structural analysis at low symmetry.
Iucrj, 2024
9CLY
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BU of 9cly by Molmil
Crystal structure of the 3-ketoacyl-(acyl-carrier-protein) reductase, CylG, from Streptococcus agalactiae 2603V/R
分子名称: CylG protein, IMIDAZOLE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Maltseva, N, Kim, Y, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2024-07-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of the 3-ketoacyl-(acyl-carrier-protein) reductase, CylG, from Streptococcus agalactiae 2603V/R
To be published
8VVA
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BU of 8vva by Molmil
Structure of DUF1480 domain-containing protein from Klebsiella pneumoniae subsp. pneumoniae SA1
分子名称: DUF1480 domain-containing protein, YebV family
著者Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2024-01-30
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of DUF1480 domain-containing protein from Klebsiella pneumoniae subsp. pneumoniae SA1
To Be Published
8VD1
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BU of 8vd1 by Molmil
Crystal Structure of KAI2 from Oryza sativa with MPD
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Probable esterase D14L
著者Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
登録日2023-12-14
公開日2024-07-31
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
9EME
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BU of 9eme by Molmil
AL amyloid fibril from the FOR103 light chain
分子名称: lambda 3 immunoglobulin light chain fragment, residues 2-116
著者Pfeiffer, P.B, Karimi-Farsijani, S, Kupfer, N, Schmidt, M, Faendrich, M.
登録日2024-03-08
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Light chain mutations contribute to defining the fibril morphology in systemic AL amyloidosis.
Nat Commun, 15, 2024
8WX0
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PNPase of M.tuberculosis with its RNA substrate
分子名称: Bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase, RNA (24-mer)
著者Wang, N, Sheng, Y.N.
登録日2023-10-27
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structures of Mycobacterium tuberculosis polynucleotide phosphorylase suggest a potential mechanism for its RNA substrate degradation.
Arch.Biochem.Biophys., 754, 2024
9FBF
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VDR complex with UG-481
分子名称: (1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(1~{S})-5-methyl-1-[(1~{R},2~{R})-2-(3-methyl-3-oxidanyl-butyl)cyclopropyl]-5-oxidanyl-hexyl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N.
登録日2024-05-13
公開日2024-06-19
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Design, Synthesis, and Biological Evaluation of New Type of Gemini Analogues with a Cyclopropane Moiety in Their Side Chain.
J.Med.Chem., 67, 2024
9AYJ
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BU of 9ayj by Molmil
Cryo-EM structure of human Cav3.2 with TTA-P2
分子名称: 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,5-dichloro-N-[(1-{[(4S)-2,2-dimethyloxan-4-yl]methyl}-4-fluoropiperidin-4-yl)methyl]benzamide, ...
著者Fan, X, Huang, J, Yan, N.
登録日2024-03-07
公開日2024-04-24
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for human Ca v 3.2 inhibition by selective antagonists.
Cell Res., 34, 2024
9EYR
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VDR complex with gemini analog UG-480
分子名称: (1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(1~{R})-5-methyl-1-[(1~{S},2~{S})-2-(3-methyl-3-oxidanyl-butyl)cyclopropyl]-5-oxidanyl-hexyl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N.
登録日2024-04-09
公開日2024-06-19
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Design, Synthesis, and Biological Evaluation of New Type of Gemini Analogues with a Cyclopropane Moiety in Their Side Chain.
J.Med.Chem., 67, 2024
8VLX
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HTT in complex with HAP40 and a small molecule.
分子名称: 40-kDa huntingtin-associated protein, Huntingtin, N-[(1S,2R)-2-benzylcyclopentyl]-N'-{1-[(1S)-1-(pyridin-4-yl)ethyl]piperidin-4-yl}urea
著者Poweleit, N, Boudet, J, Doherty, E.
登録日2024-01-12
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Discovery of a Small Molecule Ligand to the Huntingtin/HAP40 complex
To Be Published
8W35
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Aca2 from Pectobacterium phage ZF40 bound to RNA
分子名称: Anti-CRISPR associated (Aca) protein, Aca2, IR2 and IR-RBS RNA
著者Wilkinson, M.E, Birkholz, N, Kimanius, D, Fineran, P.C.
登録日2024-02-21
公開日2024-07-24
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Phage anti-CRISPR control by an RNA- and DNA-binding helix-turn-helix protein.
Nature, 631, 2024

224004

件を2024-08-21に公開中

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