Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17068 件
7K5T
DownloadVisualize
BU of 7k5t by Molmil
Bst DNA polymerase I time-resolved structure, 25.5 hr post dATP and dCTP addition
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(P*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-3'), DNA (5'-D(P*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*C)-3'), ...
著者Chim, N, Meza, R.A, Trinh, A.M, Chaput, J.C.
登録日2020-09-17
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Following replicative DNA synthesis by time-resolved X-ray crystallography.
Nat Commun, 12, 2021
7JTF
DownloadVisualize
BU of 7jtf by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM2-01
分子名称: Envelope glycoprotein E2, RM2-01 Fab heavy chain, RM2-01 Fab light chain
著者Tzarum, N, Wilson, I.A, Law, M.
登録日2020-08-17
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献HCV Env immunization elicits a rapid VH1-69-like broadly neutralizing antibody response in rhesus macaques
Immunity, 2021
7JTG
DownloadVisualize
BU of 7jtg by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM11-43
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
著者Tzarum, N, Wilson, I.A, Law, M.
登録日2020-08-17
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献HCV Env immunization elicits a rapid VH1-69-like broadly neutralizing antibody response in rhesus macaques
Immunity, 2021
2EE1
DownloadVisualize
BU of 2ee1 by Molmil
Solution structures of the Chromo domain of human chromodomain helicase-DNA-binding protein 4
分子名称: Chromodomain helicase-DNA-binding protein 4
著者Sato, M, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-15
公開日2007-08-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the Chromo domain of human chromodomain helicase-DNA-binding protein 4
To be Published
7ZHB
DownloadVisualize
BU of 7zhb by Molmil
Catalytic domain of UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum in complex with UDP-glucose (conformation 2)
分子名称: 1,3-PROPANDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Roversi, P, Zitzmann, N, Bayo, Y, Le Cornu, J.D.
登録日2022-04-06
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A quinolin-8-ol sub-millimolar inhibitor of UGGT, the ER glycoprotein quality control checkpoint
To Be Published
7ZKC
DownloadVisualize
BU of 7zkc by Molmil
Catalytic domain of UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum (apo form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, UDP-glucose-glycoprotein glucosyltransferase-like protein
著者Roversi, P, Zitzmann, N, Bayo, Y, Le Cornu, J.D.
登録日2022-04-12
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.769 Å)
主引用文献A quinolin-8-ol sub-millimolar inhibitor of UGGT, the ER glycoprotein folding quality control checkpoint.
Iscience, 26, 2023
5XAB
DownloadVisualize
BU of 5xab by Molmil
Complete structure factors and an atomic model of the calcium pump (SERCA1A) and associated phospholipids in the E2(TG) crystals
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Norimatsu, Y, Hasegawa, K, Shimizu, N, Toyoshima, C.
登録日2017-03-11
公開日2017-06-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Protein-phospholipid interplay revealed with crystals of a calcium pump.
Nature, 545, 2017
2EJ7
DownloadVisualize
BU of 2ej7 by Molmil
Solution structure of the DnaJ domain of the human protein HCG3, a hypothetical protein tmp_locus_21
分子名称: HCG3 gene
著者Ohinishi, S, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-15
公開日2007-09-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DnaJ domain of the human protein HCG3, a hypothetical protein tmp_locus_21
To be Published
2ELO
DownloadVisualize
BU of 2elo by Molmil
Solution structure of the 12th C2H2 zinc finger of human Zinc finger protein 406
分子名称: ZINC ION, Zinc finger protein 406
著者Tochio, N, Yoneyama, M, Koshiba, S, Watanabe, S, Harada, T, Umehara, T, Tanaka, A, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-27
公開日2008-04-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the 12th C2H2 zinc finger of human Zinc finger protein 406
To be Published
2ELW
DownloadVisualize
BU of 2elw by Molmil
Solution structure of the 5th C2H2 zinc finger of mouse Zinc finger protein 406
分子名称: ZINC ION, Zinc finger protein 406
著者Tochio, N, Yoneyama, M, Koshiba, S, Watanabe, S, Harada, T, Umehara, T, Tanaka, A, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-27
公開日2008-04-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the 5th C2H2 zinc finger of mouse Zinc finger protein 406
To be Published
6RRT
DownloadVisualize
BU of 6rrt by Molmil
T=4 MS2 Virus-like-particle
分子名称: Capsid protein
著者de Martin Garrido, N, Ramlaul, K, Simpson, P.A, Crone, M.A, Freemont, P.S, Aylett, C.H.S.
登録日2019-05-20
公開日2020-07-08
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Bacteriophage MS2 displays unreported capsid variability assembling T = 4 and mixed capsids.
Mol.Microbiol., 113, 2020
7D2O
DownloadVisualize
BU of 7d2o by Molmil
Solution structure of Gaussia Luciferase by NMR
分子名称: Luciferase
著者Kobayashi, N, Wu, N, Kuroda, Y, Yamazaki, T.
登録日2020-09-17
公開日2020-12-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of Gaussia Luciferase with five disulfide bonds and identification of a putative coelenterazine binding cavity by heteronuclear NMR.
Sci Rep, 10, 2020
7ZL2
DownloadVisualize
BU of 7zl2 by Molmil
Crystal Structure of human Brachyury G177D variant in complex with Molpolrt-039-246-810
分子名称: T-box transcription factor T, UNKNOWN LIGAND
著者Newman, J.A, Gavard, A, Aitkenhead, H, Imprachim, N, Sherestha, L, Burgess-Brown, N.A, von Delft, F, Bountra, C, Gileadi, O.
登録日2022-04-13
公開日2022-06-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of human Brachyury G177D variant in complex with Molpolrt-039-246-810
To Be Published
3NZW
DownloadVisualize
BU of 3nzw by Molmil
Crystal structure of the yeast 20S proteasome in complex with 2b
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Proteasome component C1, Proteasome component C11, ...
著者Groll, M, Gallastegui, N, Marechal, X, Le Ravalec, V, Basse, N, Richy, N, Genin, E, Huber, R, Moroder, M, Vidal, V, Reboud-Ravaux, M.
登録日2010-07-17
公開日2011-02-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献20S proteasome inhibition: designing noncovalent linear peptide mimics of the natural product TMC-95A.
Chemmedchem, 5, 2010
7ZKF
DownloadVisualize
BU of 7zkf by Molmil
Crystal Structure of human Brachyury G177D variant in complex with CF-5-86
分子名称: PHOSPHATE ION, T-box transcription factor T, UNKNOWN LIGAND
著者Newman, J.A, Gavard, A, Aitkenhead, H, Imprachim, N, Sherestha, L, Burgess-Brown, N.A, von Delft, F, Bountra, C, Gileadi, O.
登録日2022-04-12
公開日2022-06-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystal Structure of human Brachyury G177D variant in complex with CF-5-86
To Be Published
7ZK2
DownloadVisualize
BU of 7zk2 by Molmil
Crystal Structure of human Brachyury G177D variant in complex with CSC027898502
分子名称: N-[4-(2-morpholin-4-yl-1,3-thiazol-4-yl)phenyl]ethanamide, PHOSPHATE ION, T-box transcription factor T
著者Newman, J.A, Gavard, A, Aitkenhead, H, Imprachim, N, Sherestha, L, Burgess-Brown, N.A, von Delft, F, Bountra, C, Gileadi, O.
登録日2022-04-12
公開日2022-06-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of human Brachyury G177D variant in complex with CSC027898502
To Be Published
5XFD
DownloadVisualize
BU of 5xfd by Molmil
Serial femtosecond X-ray structure of Agrocybe cylindracea galectin with lactose solved by Se-SAD using XFEL (refined against 60,000 patterns)
分子名称: Galactoside-binding lectin, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Kuwabara, N, Fumiaki, Y, Kato, R.
登録日2017-04-10
公開日2017-08-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Experimental phase determination with selenomethionine or mercury-derivatization in serial femtosecond crystallography
IUCrJ, 4, 2017
7ZLE
DownloadVisualize
BU of 7zle by Molmil
Catalytic domain of UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum in complex with UDP
分子名称: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Roversi, P, Zitzmann, N, Bayo, Y, Le Cornu, J.D.
登録日2022-04-14
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.823 Å)
主引用文献A quinolin-8-ol sub-millimolar inhibitor of UGGT, the ER glycoprotein quality control checkpoint
To Be Published
7ZLU
DownloadVisualize
BU of 7zlu by Molmil
Catalytic domain of UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum in complex with UDP-2-deoxy-2-fluoro-D-glucose
分子名称: 1,3-PROPANDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Roversi, P, Zitzmann, N, Bayo, Y, Ibba, R.
登録日2022-04-15
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.049 Å)
主引用文献A quinolin-8-ol sub-millimolar inhibitor of UGGT, the ER glycoprotein folding quality control checkpoint.
Iscience, 26, 2023
6RXT
DownloadVisualize
BU of 6rxt by Molmil
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A
分子名称: 35S ribosomal RNA, 40S ribosomal protein S1, 40S ribosomal protein S13-like protein, ...
著者Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E.
登録日2019-06-10
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Mol.Cell, 75, 2019
6S1E
DownloadVisualize
BU of 6s1e by Molmil
Structure of thaumatin determined at SwissFEL using native-SAD at 6.06 keV from all available diffraction patterns
分子名称: L(+)-TARTARIC ACID, Thaumatin-1
著者Nass, K, Cheng, R, Vera, L, Mozzanica, A, Redford, S, Ozerov, D, Basu, S, James, D, Knopp, G, Cirelli, C, Martiel, I, Casadei, C, Weinert, T, Nogly, P, Skopintsev, P, Usov, I, Leonarski, F, Geng, T, Rappas, M, Dore, A.S, Cooke, R, Nasrollahi Shirazi, S, Dworkowski, F, Sharpe, M, Olieric, N, Steinmetz, M.O, Schertler, G, Abela, R, Patthey, L, Schmitt, B, Hennig, M, Standfuss, J, Wang, M, Milne, J.C.
登録日2019-06-18
公開日2020-07-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Advances in long-wavelength native phasing at X-ray free-electron lasers.
Iucrj, 7, 2020
5XC6
DownloadVisualize
BU of 5xc6 by Molmil
Dengue Virus 4 NS3 Helicase in complex with SSRNA SLA12
分子名称: NS3 Helicase, PHOSPHATE ION, RNA (5'-R(*AP*GP*UP*UP*GP*UP*UP*AP*GP*UP*CP*U)-3')
著者Swarbrick, C.M.D, Basavannacharya, C, Chan, K.W.K, Chan, S.A, Singh, D, Wei, N, Phoo, W.W, Luo, D, Lescar, J, Vasudevan, S.G.
登録日2017-03-22
公開日2017-11-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献NS3 helicase from dengue virus specifically recognizes viral RNA sequence to ensure optimal replication
Nucleic Acids Res., 45, 2017
5F5R
DownloadVisualize
BU of 5f5r by Molmil
TRAP1N-ADPNP
分子名称: Heat shock protein 75 kDa, mitochondrial, MAGNESIUM ION, ...
著者Tsai, F.T.F, Lee, S, Sung, N, Lee, J, Chang, C, Joachimiak, A.
登録日2015-12-04
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mitochondrial Hsp90 is a ligand-activated molecular chaperone coupling ATP binding to dimer closure through a coiled-coil intermediate.
Proc.Natl.Acad.Sci.USA, 113, 2016
5F6R
DownloadVisualize
BU of 5f6r by Molmil
Co-crystal Structure of 3-hydroxydecanoyl-(acyl carrier protein) Dehydratase from Yersinia pestis with 5-Benzoylpentanoic Acid
分子名称: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, 6-oxidanylidene-6-phenyl-hexanoic acid, PHOSPHATE ION
著者Maltseva, N, Kim, Y, Zhang, R, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-12-06
公開日2015-12-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.179 Å)
主引用文献Co-crystal Structure of 3-hydroxydecanoyl-(acyl carrier protein) Dehydratase from Yersinia pestis with 5-Benzoylpentanoic Acid
To Be Published
2E6I
DownloadVisualize
BU of 2e6i by Molmil
Solution structure of the BTK motif of tyrosine-protein kinase ITK from human
分子名称: Tyrosine-protein kinase ITK/TSK, ZINC ION
著者Li, H, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-27
公開日2007-07-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the BTK motif of tyrosine-protein kinase ITK from human
To be Published

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon