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PDB: 17068 results

7A46
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BU of 7a46 by Molmil
small conductance mechanosensitive channel YbiO
Descriptor: Putative transport protein
Authors:Flegler, V.J, Rasmussen, A, Rao, S, Wu, N, Zenobi, R, Sansom, M.S.P, Hedrich, R, Rasmussen, T, Boettcher, B.
Deposit date:2020-08-19
Release date:2020-11-18
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The MscS-like channel YnaI has a gating mechanism based on flexible pore helices.
Proc.Natl.Acad.Sci.USA, 117, 2020
7A5J
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BU of 7a5j by Molmil
Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs
Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
Deposit date:2020-08-21
Release date:2020-12-23
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
6ZMX
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BU of 6zmx by Molmil
Crystal structure of hemoglobin from turkey (Meleagiris gallopova) crystallized in orthorhombic form at 1.4 Angstrom resolution
Descriptor: Hemoglobin beta chain, Hemoglobin subunit alpha-A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pandian, R, Shobana, N, Sundaresan, S.S, Sayed, Y, Ponnuswamy, M.N.
Deposit date:2020-07-04
Release date:2020-07-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.389 Å)
Cite:Structural studies of hemoglobin from two flightless birds, ostrich and turkey: insights into their differing oxygen-binding properties.
Acta Crystallogr D Struct Biol, 77, 2021
6ZOK
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BU of 6zok by Molmil
SARS-CoV-2-Nsp1-40S complex, focused on body
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
Authors:Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M, Thiel, V, Muehlemann, O, Ban, N.
Deposit date:2020-07-07
Release date:2020-07-29
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Nat.Struct.Mol.Biol., 27, 2020
6ZPH
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BU of 6zph by Molmil
Kinesin binding protein complexed with Kif15 motor domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, KIF-binding protein, Kinesin-like protein KIF15, ...
Authors:Atherton, J, Hummel, J.J.A, Olieric, N, Locke, J, Pena, A, Rosenfeld, S.S, Steinmetz, M.O, Hoogenraad, C.C, Moores, C.A.
Deposit date:2020-07-08
Release date:2020-12-30
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:The mechanism of kinesin inhibition by kinesin-binding protein.
Elife, 9, 2020
6ZWO
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BU of 6zwo by Molmil
cryo-EM structure of human mTOR complex 2, focused on one half
Descriptor: ACETYL GROUP, INOSITOL HEXAKISPHOSPHATE, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Scaiola, A, Mangia, F, Imseng, S, Boehringer, D, Ban, N, Maier, T.
Deposit date:2020-07-28
Release date:2020-11-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The 3.2- angstrom resolution structure of human mTORC2.
Sci Adv, 6, 2020
6ZWC
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BU of 6zwc by Molmil
Z-SBTub2 photoswitch bound to tubulin-DARPin D1 complex
Descriptor: 2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J.
Deposit date:2020-07-28
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.
Cell Chem Biol, 28, 2021
6ZPI
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BU of 6zpi by Molmil
Microtubule complexed with Kif15 motor domain. Symmetrised asymmetric unit
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF15, ...
Authors:Atherton, J, Hummel, J.J.A, Olieric, N, Locke, J, Pena, A, Rosenfeld, S.S, Steinmetz, M.O, Hoogenraad, C.C, Moores, C.A.
Deposit date:2020-07-08
Release date:2020-12-30
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:The mechanism of kinesin inhibition by kinesin-binding protein.
Elife, 9, 2020
7A5O
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BU of 7a5o by Molmil
Human MUC2 AAs 21-1397
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D.
Deposit date:2020-08-21
Release date:2020-10-21
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Assembly Mechanism of Mucin and von Willebrand Factor Polymers.
Cell, 183, 2020
7A5H
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BU of 7a5h by Molmil
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
Deposit date:2020-08-21
Release date:2020-12-23
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7A5F
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BU of 7a5f by Molmil
Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
Authors:Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
Deposit date:2020-08-21
Release date:2020-12-23
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7ADC
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BU of 7adc by Molmil
Transcription termination intermediate complex 3 delta NusG
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ...
Authors:Said, N, Hilal, T, Loll, B, Wahl, C.M.
Deposit date:2020-09-14
Release date:2020-11-25
Last modified:2021-02-03
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho.
Science, 371, 2021
6ZOJ
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BU of 6zoj by Molmil
SARS-CoV-2-Nsp1-40S complex, composite map
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M.L, Thiel, V, Muehlemann, O, Ban, N.
Deposit date:2020-07-07
Release date:2020-07-22
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Nat.Struct.Mol.Biol., 27, 2020
6ZOL
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BU of 6zol by Molmil
SARS-CoV-2-Nsp1-40S complex, focused on head
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S12, ...
Authors:Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M.L, Thiel, V, Muehlemann, O, Ban, N.
Deposit date:2020-07-07
Release date:2020-07-22
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Nat.Struct.Mol.Biol., 27, 2020
6ZPG
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BU of 6zpg by Molmil
Kinesin binding protein (KBP)
Descriptor: KIF-binding protein
Authors:Atherton, J, Hummel, J.J.A, Olieric, N, Locke, J, Pena, A, Rosenfeld, S.S, Steinmetz, M.O, Hoogenraad, C.C, Moores, C.A.
Deposit date:2020-07-08
Release date:2020-12-30
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The mechanism of kinesin inhibition by kinesin-binding protein.
Elife, 9, 2020
6ZYE
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BU of 6zye by Molmil
YnaI in an open-like conformation
Descriptor: YnaI,Low conductance mechanosensitive channel YnaI
Authors:Flegler, V.J, Rasmussen, A, Rao, S, Wu, N, Zenobi, R, Sansom, M.S.P, Hedrich, R, Rasmussen, T, Boettcher, B.
Deposit date:2020-07-31
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The MscS-like channel YnaI has a gating mechanism based on flexible pore helices.
Proc.Natl.Acad.Sci.USA, 117, 2020
7A5Q
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BU of 7a5q by Molmil
Crystal structure of VcSiaP bound to sialic acid
Descriptor: DctP family TRAP transporter solute-binding subunit, GLYCEROL, N-acetyl-beta-neuraminic acid, ...
Authors:Schneberger, N, Peter, M.F, Hagelueken, G.
Deposit date:2020-08-21
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Triggering Closure of a Sialic Acid TRAP Transporter Substrate Binding Protein through Binding of Natural or Artificial Substrates.
J.Mol.Biol., 433, 2020
7A99
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BU of 7a99 by Molmil
Crystal structure of the Phe57Trp mutant of the arginine-bound form of domain 1 from TmArgBP
Descriptor: ACETATE ION, ARGININE, Amino acid ABC transporter, ...
Authors:Balasco, N, Vitagliano, L, Smaldone, G, Ruggiero, A.
Deposit date:2020-09-01
Release date:2020-11-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Development of a Protein Scaffold for Arginine Sensing Generated through the Dissection of the Arginine-Binding Protein from Thermotoga maritima .
Int J Mol Sci, 21, 2020
7UMA
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BU of 7uma by Molmil
Crystal structure of Tlde1a from Salmonella Typhimurium
Descriptor: HIS-HIS-HIS-HIS, SULFATE ION, Tlde1a
Authors:Lorente Cobo, N, Prehna, G.
Deposit date:2022-04-06
Release date:2022-11-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular characterization of the type VI secretion system effector Tlde1a reveals a structurally altered LD-transpeptidase fold.
J.Biol.Chem., 298, 2022
7UO3
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BU of 7uo3 by Molmil
Co-crystal structure of Salmonella Typhimurium Tlde1a in complex with D-alanine
Descriptor: D-ALANINE, HIS-HIS-HIS-HIS, SULFATE ION, ...
Authors:Lorente Cobo, N, Prehna, G.
Deposit date:2022-04-12
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular characterization of the type VI secretion system effector Tlde1a reveals a structurally altered LD-transpeptidase fold.
J.Biol.Chem., 298, 2022
7ADB
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BU of 7adb by Molmil
Transcription termination intermediate complex 1 delta NusG
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ...
Authors:Said, N, Hilal, T, Loll, B, Wahl, C.M.
Deposit date:2020-09-14
Release date:2020-11-04
Last modified:2021-02-03
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho.
Science, 371, 2021
7UR5
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BU of 7ur5 by Molmil
allo-tRNAUTu1 in the A, P, and E sites of the E. coli ribosome
Descriptor: allo-tRNAUTu1
Authors:Zhang, J, Krahn, N, Prabhakar, A, Vargas-Rodriguez, O, Krupkin, M, Fu, Z, Acosta-Reyes, F.J, Ge, X, Choi, J, Crnkovic, A, Ehrenberg, M, Viani Puglisi, E, Soll, D, Puglisi, J.
Deposit date:2022-04-21
Release date:2022-08-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Uncovering translation roadblocks during the development of a synthetic tRNA.
Nucleic Acids Res., 50, 2022
7URM
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BU of 7urm by Molmil
allo-tRNAUTu1A in the P site of the E. coli ribosome
Descriptor: allo-tRNAUTU1A
Authors:Zhang, J, Prabhakar, A, Krahn, N, Vargas-Rodriguez, O, Krupkin, M, Fu, Z, Acosta-Reyes, F.J, Ge, X, Choi, J, Crnkovic, A, Ehrenberg, M, Viani Puglisi, E, Soll, D, Puglisi, J.
Deposit date:2022-04-22
Release date:2022-08-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Uncovering translation roadblocks during the development of a synthetic tRNA.
Nucleic Acids Res., 50, 2022
7URI
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BU of 7uri by Molmil
allo-tRNAUTu1A in the A site of the E. coli ribosome
Descriptor: Allo-tRNAUTu1A
Authors:Zhang, J, Prabhakar, A, Krahn, N, Vargas-Rodriguez, O, Krupkin, M, Fu, Z, Acosta-Reyes, F.J, Ge, X, Choi, J, Crnkovic, A, Ehrenberg, M, Viani Puglisi, E, Soll, D, Puglisi, J.
Deposit date:2022-04-22
Release date:2022-08-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Uncovering translation roadblocks during the development of a synthetic tRNA.
Nucleic Acids Res., 50, 2022
7UO8
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BU of 7uo8 by Molmil
Co-crystal structure of Salmonella Typhimurium Tlde1a in complex with D-methionine
Descriptor: D-METHIONINE, HIS-HIS-HIS-HIS-HIS, SULFATE ION, ...
Authors:Lorente Cobo, N, Prehna, G.
Deposit date:2022-04-12
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular characterization of the type VI secretion system effector Tlde1a reveals a structurally altered LD-transpeptidase fold.
J.Biol.Chem., 298, 2022

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PDB entries from 2024-08-28

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