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PDB: 204 results

2MET
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NMR spatial structure of the trimeric mutant TM domain of VEGFR2 receptor.
Descriptor: Vascular endothelial growth factor receptor 2
Authors:Mineev, K.S, Arseniev, A.A, Shulepko, M, Lyukmanova, E.N, Kirpichnikov, M.P.
Deposit date:2013-10-02
Release date:2014-07-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and functional characterization of alternative transmembrane domain conformations in VEGF receptor 2 activation
Structure, 22, 2014
2MEU
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NMR spatial structure of mutant dimeric TM domain of VEGFR2 receptor
Descriptor: Vascular endothelial growth factor receptor 2
Authors:Mineev, K.S, Arseniev, A.S, Lyukmanova, E.N, Shulepko, M.A, Kirpichnikov, M.P.
Deposit date:2013-10-02
Release date:2014-07-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and functional characterization of alternative transmembrane domain conformations in VEGF receptor 2 activation
Structure, 22, 2014
2MKA
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BU of 2mka by Molmil
Spatial structure of the Toll-like receptor 3 transmembrane domain in the trimeric state
Descriptor: Toll-like receptor 3
Authors:Mineev, K, Gonscharuk, S.A, Arseniev, A.S.
Deposit date:2014-02-04
Release date:2014-09-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Toll-like receptor 3 transmembrane domain is able to perform various homotypic interactions: An NMR structural study.
Febs Lett., 588, 2014
2N5S
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BU of 2n5s by Molmil
Spatial structure of EGFR transmembrane and juxtamembrane domains in DPC micelles
Descriptor: Epidermal growth factor receptor
Authors:Mineev, K, Bocharov, E, Bocharova, O, Arseniev, A.
Deposit date:2015-07-27
Release date:2015-10-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Membrane Mimetic Affects the Spatial Structure and Mobility of EGFR Transmembrane and Juxtamembrane Domains.
Biochemistry, 54, 2015
2LCX
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BU of 2lcx by Molmil
Spatial Structure of the ErbB4 dimeric TM domain
Descriptor: Receptor tyrosine-protein kinase erbB-4
Authors:Mineev, K.S, Bocharov, E.V, Arseniev, A.S.
Deposit date:2011-05-11
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and thermodynamic insight into the process of "weak" dimerization of the ErbB4 transmembrane domain by solution NMR.
Biochim.Biophys.Acta, 1818, 2012
2L2T
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BU of 2l2t by Molmil
Solution NMR structure of the ErbB4 dimeric membrane domain
Descriptor: Receptor tyrosine-protein kinase erbB-4
Authors:Mineev, K.S, Bocharov, E.V, Goncharuk, M.V, Arseniev, A.S.
Deposit date:2010-08-27
Release date:2011-09-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and thermodynamic insight into the process of "weak" dimerization of the ErbB4 transmembrane domain by solution NMR.
Biochim. Biophys. Acta, 1818, 2012
2L03
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Spatial structure of water-soluble Lynx1
Descriptor: Ly-6/neurotoxin-like protein 1
Authors:Mineev, K.S, Shenkarev, Z.O, Arseniev, A.S.
Deposit date:2010-06-30
Release date:2011-01-19
Last modified:2014-10-01
Method:SOLUTION NMR
Cite:NMR structure and action on nicotinic acetylcholine receptors of water-soluble domain of human LYNX1
J.Biol.Chem., 286, 2011
2LQX
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BU of 2lqx by Molmil
NMR spatial structure of the trypsin inhibitor BWI-2c from the buckwheat seeds
Descriptor: Trypsin inhibitor BWI-2c
Authors:Mineev, K.S, Vassilevski, A.A, Oparin, P.B, Grishin, E.V, Egorov, T.A.
Deposit date:2012-03-19
Release date:2012-05-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Buckwheat trypsin inhibitor with helical hairpin structure belongs to a new family of plant defence peptides.
Biochem.J., 446, 2012
2J76
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BU of 2j76 by Molmil
Solution structure and RNA interactions of the RNA recognition motif from eukaryotic translation initiation factor 4B
Descriptor: EUKARYOTIC TRANSLATION INITIATION FACTOR 4B
Authors:Fleming, K, Ghuman, J, Yuan, X.M, Simpson, P, Szendroi, A, Matthews, S, Curry, S.
Deposit date:2006-10-06
Release date:2008-10-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and RNA Interactions of the RNA Recognition Motif from Eukaryotic Translation Initiation Factor 4B.
Biochemistry, 42, 2003
2JWA
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ErbB2 transmembrane segment dimer spatial structure
Descriptor: Receptor tyrosine-protein kinase erbB-2
Authors:Mineev, K.S, Bocharov, E.V, Arseniev, A.S.
Deposit date:2007-10-09
Release date:2008-01-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Spatial Structure of the Dimeric Transmembrane Domain of the Growth Factor Receptor ErbB2 Presumably Corresponding to the Receptor Active State
J.Biol.Chem., 283, 2008
2L9U
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Spatial structure of dimeric ErbB3 transmembrane domain
Descriptor: Receptor tyrosine-protein kinase erbB-3
Authors:Mineev, K.S, Arseniev, A.S.
Deposit date:2011-02-24
Release date:2011-05-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Spatial structure and dimer--monomer equilibrium of the ErbB3 transmembrane domain in DPC micelles.
Biochim. Biophys. Acta, 1808, 2011
2MK9
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Spatial structure of the dimeric transmembrane domain of Toll-like receptor 3
Descriptor: Toll-like receptor 3
Authors:Mineev, K.S, Goncharuk, S.A, Arseniev, A.S.
Deposit date:2014-02-04
Release date:2014-09-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Toll-like receptor 3 transmembrane domain is able to perform various homotypic interactions: An NMR structural study.
Febs Lett., 588, 2014
2KPF
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BU of 2kpf by Molmil
Spatial structure of the dimeric transmembrane domain of glycophorin A in bicelles soluton
Descriptor: Glycophorin-A
Authors:Mineev, K.S, Bocharov, E.V, Goncharuk, M.V, Arseniev, A.S, Volynsky, P.E, Efremov, R.G.
Deposit date:2009-10-13
Release date:2010-09-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dimeric structure of the transmembrane domain of glycophorin a in lipidic and detergent environments.
Acta Naturae, 3, 2011
2N2Z
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BU of 2n2z by Molmil
NMR spatial structure of nonspecific lipid transfer protein from the dill Anethum graveolens L.
Descriptor: Non-specific lipid-transfer protein
Authors:Mineev, K.S, Melnikova, D.N, Finkina, E.I, Arseniev, A.S, Ovchinnikova, T.V.
Deposit date:2015-05-19
Release date:2016-03-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A novel lipid transfer protein from the dill Anethum graveolens L.: isolation, structure, heterologous expression, and functional characteristics.
J.Pept.Sci., 22, 2016
2KPE
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BU of 2kpe by Molmil
Refined structure of Glycophorin A transmembrane segment dimer in DPC micelles
Descriptor: Glycophorin-A
Authors:Mineev, K.S, Bocharov, E.V, Goncharuk, M.V, Arseniev, A.S, Volynsky, P.E, Efremov, R.G.
Deposit date:2009-10-13
Release date:2010-09-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dimeric structure of the transmembrane domain of glycophorin a in lipidic and detergent environments.
Acta Naturae, 3, 2011
2KS1
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BU of 2ks1 by Molmil
Heterodimeric association of Transmembrane domains of ErbB1 and ErbB2 receptors Enabling Kinase Activation
Descriptor: Epidermal growth factor receptor, Receptor tyrosine-protein kinase erbB-2
Authors:Mineev, K.S, Bocharov, E.V, Pustovalova, Y.E, Bocharova, O.V, Chupin, V.V, Arseniev, A.S.
Deposit date:2009-12-24
Release date:2010-06-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Spatial Structure of the Transmembrane Domain Heterodimer of ErbB1 and ErbB2 Receptor Tyrosine Kinases
J.Mol.Biol., 2010
3TVD
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BU of 3tvd by Molmil
Crystal Structure of Mouse RhoA-GTP complex
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
Authors:Swaminathan, K, Pal, K, Jobichen, C.
Deposit date:2011-09-20
Release date:2012-10-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.989 Å)
Cite:Crystal structure of mouse RhoA:GTPgammaS complex in a centered lattice.
J.Struct.Funct.Genom., 13, 2012
3PLQ
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BU of 3plq by Molmil
Crystal structure of PKA type I regulatory subunit bound with Rp-8-Br-cAMPS
Descriptor: (2R,4aR,6R,7R,7aS)-6-(6-amino-8-bromo-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-sulfide, ZINC ION, cAMP-dependent protein kinase type I-alpha regulatory subunit
Authors:Swaminathan, K.
Deposit date:2010-11-15
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cyclic AMP analog blocks kinase activation by stabilizing inactive conformation: Conformational selection highlights a new concept in allosteric inhibitor design
To be Published
1ZME
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BU of 1zme by Molmil
CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX
Descriptor: DNA (5'-D(*AP*CP*GP*GP*AP*GP*(5IU)P*TP*GP*GP*CP*TP*(5IU)P*CP*CP*CP*G)-3'), DNA (5'-D(*AP*CP*GP*GP*GP*AP*AP*GP*CP*CP*AP*AP*CP*TP*CP*CP*G)-3'), PROLINE UTILIZATION TRANSCRIPTION ACTIVATOR, ...
Authors:Swaminathan, K, Marmorstein, R.
Deposit date:1997-08-06
Release date:1998-09-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a PUT3-DNA complex reveals a novel mechanism for DNA recognition by a protein containing a Zn2Cys6 binuclear cluster.
Nat.Struct.Biol., 4, 1997
1HUJ
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BU of 1huj by Molmil
REFINED STRUCTURE OF YEAST INORGANIC PYROPHOSPHATASE AND ITS K61R MUTANT
Descriptor: INORGANIC PYROPHOSPHATASE, MAGNESIUM ION
Authors:Swaminathan, K, Cooperman, B.S, Lahti, R, Voet, D.
Deposit date:1997-12-26
Release date:1998-04-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refined Structure of Yeast Inorganic Pyrophosphatase and its K61R Mutant
To be Published
1HUK
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BU of 1huk by Molmil
REFINED STRUCTURE OF YEAST INORGANIC PYROPHOSPHATASE AND ITS K61R MUTANT
Descriptor: INORGANIC PYROPHOSPHATASE, MAGNESIUM ION
Authors:Swaminathan, K, Cooperman, B.S, Lahti, R, Voet, D.
Deposit date:1997-12-26
Release date:1998-04-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined Structure of Yeast Inorganic Pyrophosphatase and its K61R Mutant
To be Published
7NUW
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BU of 7nuw by Molmil
Crystal structure of the TIR domain of human TLR1 (crystallised with Zn2+ ions)
Descriptor: Toll-like receptor 1
Authors:Vakhrameev, D.D, Luginina, A.P, Shevtsov, M.B, Lushpa, V.A, Mineev, K.S, Borshchevskiy, V.I.
Deposit date:2021-03-15
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Modulation of Toll-like receptor 1 intracellular domain structure and activity by Zn 2+ ions.
Commun Biol, 4, 2021
7NUX
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BU of 7nux by Molmil
Crystal structure of the TIR domain of human TLR1 (crystallised without ZN2+ ions)
Descriptor: Toll-like receptor 1
Authors:Vakhrameev, D.D, Luginina, A.P, Shevtsov, M.B, Lushpa, V.A, Mineev, K.S, Borshchevskiy, V.I.
Deposit date:2021-03-15
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Modulation of Toll-like receptor 1 intracellular domain structure and activity by Zn 2+ ions.
Commun Biol, 4, 2021
4V0R
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BU of 4v0r by Molmil
DENGUE VIRUS FULL LENGTH NS5 COMPLEXED WITH GTP AND SAH
Descriptor: FORMIC ACID, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhao, Y, Soh, S, Zheng, J, Phoo, W.W, Swaminathan, K, Cornvik, T.C, Lim, S.P, Shi, P.-Y, Lescar, J, Vasudevan, S.G, Luo, D.
Deposit date:2014-09-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Crystal Structure of the Dengue Virus Ns5 Protein Reveals a Novel Inter-Domain Interface Essential for Protein Flexibility and Virus Replication.
Plos Pathog., 11, 2015
4URS
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BU of 4urs by Molmil
Crystal Structure of GGDEF domain from T.maritima
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DIGUANYLATE CYCLASE, ...
Authors:Deepthi, A, Liew, C.W, Liang, Z.X, Swaminathan, K, Lescar, J.
Deposit date:2014-07-02
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure of a Diguanylate Cyclase from Thermotoga Maritima: Insights Into Activation, Feedback Inhibition and Thermostability
Plos One, 9, 2014

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