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PDB: 1323 results

3JA7
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BU of 3ja7 by Molmil
Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution
Descriptor: Portal protein gp20
Authors:Sun, L, Zhang, X, Gao, S, Rao, P.A, Padilla-Sanchez, V, Chen, Z, Sun, S, Xiang, Y, Subramaniam, S, Rao, V.B, Rossmann, M.G.
Deposit date:2015-04-21
Release date:2015-07-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution.
Nat Commun, 6, 2015
5KIF
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BU of 5kif by Molmil
Structural impact of single ribonucleotides in DNA
Descriptor: DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3'), DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3')
Authors:Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W.
Deposit date:2016-06-16
Release date:2016-08-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
6HYE
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BU of 6hye by Molmil
PDX1.2/PDX1.3 complex (PDX1.3:K97A)
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-20
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
5BNP
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BU of 5bnp by Molmil
Crystal structure of human enterovirus D68 in complex with 3'SLN
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Liu, Y, Sheng, J, Meng, G, Xiao, C, Rossmann, M.G.
Deposit date:2015-05-26
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Sialic acid-dependent cell entry of human enterovirus D68.
Nat Commun, 6, 2015
3N23
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BU of 3n23 by Molmil
Crystal structure of the high affinity complex between ouabain and the E2P form of the sodium-potassium pump
Descriptor: MAGNESIUM ION, Na+/K+ ATPase gamma subunit transcript variant a, OUABAIN, ...
Authors:Yatime, L, Laursen, M, Morth, J.P, Esmann, M, Nissen, P, Fedosova, N.U.
Deposit date:2010-05-17
Release date:2011-01-19
Last modified:2014-09-17
Method:X-RAY DIFFRACTION (4.6 Å)
Cite:Structural insights into the high affinity binding of cardiotonic steroids to the Na+,K+-ATPase.
J.Struct.Biol., 174, 2011
2O0K
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BU of 2o0k by Molmil
T4 gp17 ATPase domain mutant
Descriptor: DNA packaging protein Gp17
Authors:Sun, S, Rossmann, M.G.
Deposit date:2006-11-27
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of the ATPase that Powers DNA Packaging into Bacteriophage T4 Procapsids
MOL.CELL, 25, 2007
2LDB
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BU of 2ldb by Molmil
STRUCTURE DETERMINATION AND REFINEMENT OF BACILLUS STEAROTHERMOPHILUS LACTATE DEHYDROGENASE
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, L-LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Piontek, K, Rossmann, M.G.
Deposit date:1989-03-27
Release date:1989-07-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure determination and refinement of Bacillus stearothermophilus lactate dehydrogenase.
Proteins, 7, 1990
2LAR
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BU of 2lar by Molmil
DNA / RNA Hybrid containing a central stereo specific Rp borano phosphate linkage
Descriptor: DNA_(5'-D(*AP*TP*GP*GP*TP*BGR*CP*TP*C)-3')_, RNA_(5'-R(*GP*AP*GP*CP*AP*CP*CP*AP*U)-3')_
Authors:Johnson, C.N, Spring, A.M, Shaw, B.R, Germann, M.W.
Deposit date:2011-03-18
Release date:2011-10-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of the RNase H1 activity on stereo regular borano phosphonate DNA/RNA hybrids.
Biochemistry, 50, 2011
2A2A
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BU of 2a2a by Molmil
High-resolution crystallographic analysis of the autoinhibited conformation of a human death-associated protein kinase
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Death-associated protein kinase 2, ...
Authors:Kursula, P, Wilmanns, M.
Deposit date:2005-06-22
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Death-Associated Protein Kinase Activity Is Regulated by Coupled Calcium/Calmodulin Binding to Two Distinct Sites
Structure, 2016
3HBV
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BU of 3hbv by Molmil
PrtC methionine mutants: M226A in-house
Descriptor: CALCIUM ION, CHLORIDE ION, Secreted protease C, ...
Authors:Oberholzer, A.E, Bumann, M, Hege, T, Russo, S, Baumann, U.
Deposit date:2009-05-05
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site
Biol.Chem., 390, 2009
2LIB
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BU of 2lib by Molmil
DNA sequence context conceals alpha anomeric lesion
Descriptor: DNA (5'-D(*CP*GP*TP*CP*CP*TP*GP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*(A3A)P*GP*GP*AP*CP*G)-3')
Authors:Johnson, C.N, Spring, A.M, Cunningham, R.P, Germann, M.W.
Deposit date:2011-08-27
Release date:2012-08-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA sequence context conceals alpha-anomeric lesions.
J.Mol.Biol., 416, 2012
2LB4
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BU of 2lb4 by Molmil
DNA / RNA Hybrid containing a central stereo specific Sp borano phosphate linkage
Descriptor: DNA_(5'-D(*AP*TP*GP*GP*TP*BGR*CP*TP*C)-3')_, RNA_(5'-R(*GP*AP*GP*CP*AP*CP*CP*AP*U)-3')_
Authors:Johnson, C.N, Spring, A.M, Shaw, B.R, Germann, M.W.
Deposit date:2011-03-22
Release date:2011-06-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Basis of the RNase H1 Activity on Stereo Regular Borano Phosphonate DNA/RNA Hybrids.
Biochemistry, 50, 2011
3LCY
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BU of 3lcy by Molmil
Titin Ig tandem domains A164-A165
Descriptor: Titin
Authors:Chen, Q, Groves, M.R, Wilmanns, M.
Deposit date:2010-01-12
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural investigation of the Titin A-band tandem Ig domains A164-A165
To be Published
6HX3
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BU of 6hx3 by Molmil
PDX1.2/PDX1.3 complex
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-15
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
6LDH
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BU of 6ldh by Molmil
REFINED CRYSTAL STRUCTURE OF DOGFISH M4 APO-LACTATE DEHYDROGENASE
Descriptor: M4 APO-LACTATE DEHYDROGENASE, SULFATE ION
Authors:Abad-Zapatero, C, Rossmann, M.G.
Deposit date:1987-11-25
Release date:1989-07-12
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined crystal structure of dogfish M4 apo-lactate dehydrogenase.
J.Mol.Biol., 198, 1987
2J1M
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BU of 2j1m by Molmil
P450 BM3 Heme domain in complex with DMSO
Descriptor: CYTOCHROME P450 102, DIMETHYL SULFOXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kuper, J, Tuck-Seng, W, Roccatano, D, Wilmanns, M, Schwaneberg, U.
Deposit date:2006-08-14
Release date:2007-05-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Understanding a Mechanism of Organic Cosolvent Inactivation in Heme Monooxygenase P450 Bm-3.
J.Am.Chem.Soc., 129, 2007
6R1D
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BU of 6r1d by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with compound 7d, co-crystallized
Descriptor: (phenylmethyl) ~{N}-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]carbamate, Cereblon isoform 4, ZINC ION
Authors:Heim, C, Hartmann, M.D.
Deposit date:2019-03-14
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:De-Novo Design of Cereblon (CRBN) Effectors Guided by Natural Hydrolysis Products of Thalidomide Derivatives.
J.Med.Chem., 62, 2019
8H2I
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BU of 8h2i by Molmil
Near-atomic structure of five-fold averaged PBCV-1 capsid
Descriptor: MCPv1, MCPv2, MCPv3, ...
Authors:Shao, Q, Agarkova, I.V, Noel, E.A, Dunigan, D.D, Liu, Y, Wang, A, Guo, M, Xie, L, Zhao, X, Rossmann, M.G, Van Etten, J.L, Klose, T, Fang, Q.
Deposit date:2022-10-06
Release date:2022-11-16
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.
Nat Commun, 13, 2022
1WRZ
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BU of 1wrz by Molmil
Calmodulin complexed with a peptide from a human death-associated protein kinase
Descriptor: CALCIUM ION, Death-associated protein kinase 2, calmodulin
Authors:Kursula, P, Vahokoski, J, Wilmanns, M.
Deposit date:2004-10-29
Release date:2006-03-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The mode of binding of calmodulin to death-associated protein kinases
To be Published
2MUC
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BU of 2muc by Molmil
MUCONATE CYCLOISOMERASE VARIANT F329I
Descriptor: MANGANESE (II) ION, PROTEIN (MUCONATE CYCLOISOMERASE)
Authors:Schell, U, Helin, S, Kajander, T, Schlomann, M, Goldman, A.
Deposit date:1998-10-26
Release date:1999-12-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the activity of two muconate cycloisomerase variants toward substituted muconates.
Proteins, 34, 1999
6J7W
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BU of 6j7w by Molmil
Crystal Structure of Human BCMA in complex with UniAb(TM) VH
Descriptor: Tumor necrosis factor receptor superfamily member 17, UniAb
Authors:Clarke, S.C, Ma, B, Trinklein, N.D, Schellenberger, U, Osborn, M, Ouisse, L, Boudreau, A, Davison, L, Harris, K.E, Ugamraj, H, Balasubramani, A, Dang, K, Jorgensen, B, Ogana, H, Pham, D, Pratap, P, Sankaran, P, Anegon, I, van Schooten, W, Bruggemann, M, Buelow, R, Force Aldred, S.
Deposit date:2019-01-18
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Multispecific Antibody Development Platform Based on Human Heavy Chain Antibodies
Front Immunol, 9, 2018
6HIX
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BU of 6hix by Molmil
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the large mitoribosomal subunit
Descriptor: 12S rRNA, 50S ribosomal protein L13, putative, ...
Authors:Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, K, Leitner, A, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2018-08-31
Release date:2018-09-26
Last modified:2019-02-06
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
3MUC
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BU of 3muc by Molmil
MUCONATE CYCLOISOMERASE VARIANT I54V
Descriptor: MANGANESE (II) ION, PROTEIN (MUCONATE CYCLOISOMERASE)
Authors:Schell, U, Helin, S, Kajander, T, Schlomann, M, Goldman, A.
Deposit date:1998-10-27
Release date:1999-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the activity of two muconate cycloisomerase variants toward substituted muconates.
Proteins, 34, 1999
1YR5
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BU of 1yr5 by Molmil
1.7-A structure of calmodulin bound to a peptide from DAP kinase
Descriptor: 19-mer from Death-associated protein kinase 1, CALCIUM ION, calmodulin
Authors:Kursula, P, Vahokoski, J, Wilmanns, M.
Deposit date:2005-02-03
Release date:2006-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Recognition of human death-associated protein kinases by calmodulin
To be Published
6SVH
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BU of 6svh by Molmil
Protein allostery of the WW domain at atomic resolution: FFpSPR bound structure
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Strotz, D, Orts, J, Friedmann, M, Guntert, P, Vogeli, B, Riek, R.
Deposit date:2019-09-18
Release date:2020-09-30
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Protein Allostery at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 59, 2020

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數據於2024-07-10公開中

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