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PDB: 128 results

3T35
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BU of 3t35 by Molmil
Arabidopsis thaliana dynamin-related protein 1A in postfission state
Descriptor: Dynamin-related protein 1A, LINKER, GUANOSINE-5'-DIPHOSPHATE
Authors:Yan, L.M, Ma, Y.Y, Sun, Y.N, Lou, Z.Y.
Deposit date:2011-07-24
Release date:2012-06-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.592 Å)
Cite:Structural basis for mechanochemical role of Arabidopsis thaliana dynamin-related protein in membrane fission
J Mol Cell Biol, 3, 2011
3T34
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BU of 3t34 by Molmil
Arabidopsis thaliana dynamin-related protein 1A (AtDRP1A) in prefission state
Descriptor: Dynamin-related protein 1A, LINKER, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Yan, L.M, Ma, Y.Y, Sun, Y.N, Lou, Z.Y.
Deposit date:2011-07-24
Release date:2012-06-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Structural basis for mechanochemical role of Arabidopsis thaliana dynamin-related protein in membrane fission
J Mol Cell Biol, 3, 2011
4IXL
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BU of 4ixl by Molmil
Crystal structure of endo-beta-1,4-xylanase from the alkaliphilic Bacillus sp. SN5
Descriptor: SULFATE ION, xylanase
Authors:Bai, W.Q, Xue, Y.F, Huang, J.X, Zhou, C, Guo, R.T, Ma, Y.H.
Deposit date:2013-01-26
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure Analysis of Alkaline xylanase from Alkaliphilic Bacillus sp. SN5 Implications for pH-dependent enzyme activity
To be Published
3EWP
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BU of 3ewp by Molmil
complex of substrate ADP-ribose with IBV Nsp3 ADRP domain
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3
Authors:Xu, Y, Cong, L, Chen, C, Wei, L, Zhao, Q, Xu, X, Ma, Y, Bartlam, M, Rao, Z.
Deposit date:2008-10-16
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
J.Virol., 83, 2009
3EWQ
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BU of 3ewq by Molmil
HCov-229E Nsp3 ADRP domain
Descriptor: Non-structural protein 3
Authors:Xu, Y, Cong, L, Chen, C, Wei, L, Zhao, Q, Xu, X, Ma, Y, Bartlam, M, Rao, Z.
Deposit date:2008-10-16
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
J.Virol., 83, 2009
3EWR
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BU of 3ewr by Molmil
complex of substrate ADP-ribose with HCoV-229E Nsp3 ADRP domain
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3
Authors:Xu, Y, Cong, L, Chen, C, Wei, L, Zhao, Q, Xu, X, Ma, Y, Bartlam, M, Rao, Z.
Deposit date:2008-10-16
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
J.Virol., 83, 2009
3EWO
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BU of 3ewo by Molmil
IBV Nsp3 ADRP domain
Descriptor: Non-structural protein 3
Authors:Xu, Y, Cong, L, Chen, C, Wei, L, Zhao, Q, Xu, X, Ma, Y, Bartlam, M, Rao, Z.
Deposit date:2008-10-16
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
J.Virol., 83, 2009
5HRC
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BU of 5hrc by Molmil
Crystal structure of an aspartate/glutamate racemase in complex with L-aspartate
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ASPARTIC ACID, aspartate/glutamate racemase
Authors:Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
Deposit date:2016-01-23
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
8IKP
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BU of 8ikp by Molmil
Cryo-EM structure of hnRAC1-8I fibril
Descriptor: GLY-PHE-GLY-GLY-ASN-ASP-ASN-PHI-GLY
Authors:Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
Deposit date:2023-02-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM structure of hnRAC1-8I fibril
To Be Published
5HQT
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BU of 5hqt by Molmil
Crystal structure of an aspartate/glutamate racemase from Escherichia coli O157
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, aspartate/glutamate racemase
Authors:Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
Deposit date:2016-01-22
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
5HRA
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BU of 5hra by Molmil
Crystal structure of an aspartate/glutamate racemase in complex with D-aspartate
Descriptor: D-ASPARTIC ACID, aspartate/glutamate racemase
Authors:Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
Deposit date:2016-01-23
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
3VCB
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BU of 3vcb by Molmil
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59
Descriptor: RNA-directed RNA polymerase
Authors:Xu, X, Lou, Z, Ma, Y, Chen, X, Yang, Z, Tong, X, Zhao, Q, Xu, Y, Deng, H, Bartlam, M, Rao, Z.
Deposit date:2012-01-03
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59.
Plos One, 4, 2009
6M1H
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BU of 6m1h by Molmil
CryoEM structure of human PAC1 receptor in complex with maxadilan
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Song, X, Wang, J, Zhang, D, Wang, H.W, Ma, Y.
Deposit date:2020-02-26
Release date:2020-03-11
Last modified:2020-05-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of PAC1 receptor reveal ligand binding mechanism.
Cell Res., 30, 2020
6LNA
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BU of 6lna by Molmil
YdiU complex with AMPNPP and Mn2+
Descriptor: CALCIUM ION, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Li, B, Yang, Y, Ma, Y.
Deposit date:2019-12-28
Release date:2020-12-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:The YdiU Domain Modulates Bacterial Stress Signaling through Mn 2+ -Dependent UMPylation.
Cell Rep, 32, 2020
6M1I
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BU of 6m1i by Molmil
CryoEM structure of human PAC1 receptor in complex with PACAP38
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Song, X, Wang, J, Zhang, D, Wang, H.W, Ma, Y.
Deposit date:2020-02-26
Release date:2020-03-11
Last modified:2020-05-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of PAC1 receptor reveal ligand binding mechanism.
Cell Res., 30, 2020
3VC8
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BU of 3vc8 by Molmil
Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59
Descriptor: RNA-directed RNA polymerase
Authors:Xu, X, Lou, Z, Ma, Y, Chen, X, Yang, Z, Tong, X, Zhao, Q, Xu, Y, Deng, H, Bartlam, M, Rao, Z.
Deposit date:2012-01-03
Release date:2012-01-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59.
Plos One, 4, 2009
3WDJ
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BU of 3wdj by Molmil
Crystal structure of Pullulanase complexed with maltotetraose from Anoxybacillus sp. LM18-11
Descriptor: CALCIUM ION, Type I pullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Xu, J, Ren, F, Huang, C.H, Zheng, Y, Zhen, J, Ko, T.P, Chen, C.C, Chan, H.C, Guo, R.T, Ma, Y, Song, H.
Deposit date:2013-06-18
Release date:2014-04-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Cloning, Expression, Functional and Structural Studies of Pullulanase from Anoxybacillus sp. LM18-11
To be Published
3WDH
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BU of 3wdh by Molmil
Crystal structure of Pullulanase from Anoxybacillus sp. LM18-11
Descriptor: CALCIUM ION, Type I pullulanase
Authors:Xu, J, Ren, F, Huang, C.H, Zheng, Y, Zhen, J, Ko, T.P, Chen, C.C, Chan, H.C, Guo, R.T, Ma, Y, Song, H.
Deposit date:2013-06-18
Release date:2014-06-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Cloning, Expression, Functional and Structural Studies of Pullulanase from Anoxybacillus sp. LM18-11
To be Published
8IKB
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BU of 8ikb by Molmil
Cryo-EM structure of hnRAC1-2I fibril.
Descriptor: GLY-PHI-GLY-GLY-ASN-ASP-ASN-PHE-GLY
Authors:Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
Deposit date:2023-02-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Cryo-EM structure of hnRAC1-2I fibril.
To Be Published
3WDI
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BU of 3wdi by Molmil
Crystal structure of Pullulanase complexed with maltotriose from Anoxybacillus sp. LM18-11
Descriptor: CALCIUM ION, Type I pullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Xu, J, Ren, F, Huang, C.H, Zheng, Y, Zhen, J, Ko, T.P, Chen, C.C, Chan, H.C, Guo, R.T, Ma, Y, Song, H.
Deposit date:2013-06-18
Release date:2014-06-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cloning, Expression, Functional and Structural Studies of Pullulanase from Anoxybacillus sp. LM18-11
To be Published
6LH4
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BU of 6lh4 by Molmil
Crystal structural of MacroD1-ADPr complex
Descriptor: ADP-ribose glycohydrolase MACROD1, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Yang, X, Ma, Y, Li, Y.
Deposit date:2019-12-06
Release date:2020-12-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Molecular basis for the MacroD1-mediated hydrolysis of ADP-ribosylation.
DNA Repair (Amst), 94, 2020
8IY7
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BU of 8iy7 by Molmil
Cryo-EM structure of DIP-2I8I fibril polymorph1
Descriptor: GLY-PHI-GLY-ASN-GLY-ASN-GLY-PHI-GLY
Authors:Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
Deposit date:2023-04-04
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Cryo-EM structure of DIP-2I8I fibril polymorph1
To Be Published
8IZZ
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BU of 8izz by Molmil
Cryo-EM structure of DIP-2I8I polymorph 2
Descriptor: GLY-PHI-GLY-ASN-GLY-ASN-GLY-PHI-GLY
Authors:Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
Deposit date:2023-04-09
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structure of DIP-2I8I fibril polymorph 2
To Be Published
8IKS
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BU of 8iks by Molmil
Cryo-EM structure of hnRAC1-2I8I fibril.
Descriptor: GLY-PHI-GLY-GLY-ASN-ASP-ASN-PHI-GLY
Authors:Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
Deposit date:2023-03-01
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structure of hnRAC1-2I8I fibril.
To Be Published
8IK7
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BU of 8ik7 by Molmil
Cryo-EM structure of hnRAC1 fibril.
Descriptor: GLY-PHE-GLY-GLY-ASN-ASP-ASN-PHE-GLY
Authors:Li, D.N, Ma, Y.Y, Li, D, Dai, B, Liu, C.
Deposit date:2023-02-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Formed fibrils of hnRNP A1 reversible amyloid core GFGGNDNFG (residues 209-217)
To Be Published

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