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PDB: 51964 results

4YT0
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Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with 2-methyl-N-[3-(1-methylethoxy)phenyl]benzamide.
Descriptor: 2-methyl-N-[3-(1-methylethoxy)phenyl]benzamide, Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Harada, S, Shiba, T, Sato, D, Yamamoto, A, Nagahama, M, Yone, A, Inaoka, D.K, Sakamoto, K, Inoue, M, Honma, T, Kita, K.
Deposit date:2015-03-17
Release date:2015-08-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.66 Å)
Cite:Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015
4EYZ
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Crystal structure of an uncommon cellulosome-related protein module from Ruminococcus flavefaciens that resembles papain-like cysteine peptidases
Descriptor: 1,2-ETHANEDIOL, Cellulosome-related protein module from Ruminococcus flavefaciens that resembles papain-like cysteine peptidases
Authors:Frolow, F, Voronov-Goldman, M, Bayer, E, Lamed, R.
Deposit date:2012-05-02
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.383 Å)
Cite:Crystal Structure of an Uncommon Cellulosome-Related Protein Module from Ruminococcus flavefaciens That Resembles Papain-Like Cysteine Peptidases.
Plos One, 8, 2013
1T1A
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Late intermediate IL1 from time-resolved crystallography of the E46Q mutant of PYP
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
Deposit date:2004-04-15
Release date:2005-01-18
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
1SXB
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CRYSTAL STRUCTURE OF REDUCED BOVINE ERYTHROCYTE SUPEROXIDE DISMUTASE AT 1.9 ANGSTROMS RESOLUTION
Descriptor: COPPER (II) ION, SUPEROXIDE DISMUTASE, ZINC ION
Authors:Rypniewski, W.R, Mangani, S, Bruni, B, Orioli, P, Casati, M, Wilson, K.S.
Deposit date:1995-03-17
Release date:1995-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of reduced bovine erythrocyte superoxide dismutase at 1.9 A resolution.
J.Mol.Biol., 251, 1995
1T1I
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High Resolution Crystal Structure of Mutant W129A of Kumamolisin, a Sedolisin Type Proteinase (previously called Kumamolysin or KSCP)
Descriptor: CALCIUM ION, SULFATE ION, kumamolisin
Authors:Comellas-Bigler, M, Maskos, K, Huber, R, Oyama, H, Oda, K, Bode, W.
Deposit date:2004-04-16
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:1.2 a crystal structure of the serine carboxyl proteinase pro-kumamolisin: structure of an intact pro-subtilase
Structure, 12, 2004
4F10
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Alginate lyase A1-III H192A complexed with tetrasaccharide
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
Authors:Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K.
Deposit date:2012-05-05
Release date:2012-06-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
1T2T
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Crystal structure of the DNA-binding domain of intron endonuclease I-TevI with operator site
Descriptor: 5'-D(*AP*AP*TP*TP*AP*AP*AP*GP*GP*GP*CP*AP*GP*TP*CP*CP*TP*AP*CP*AP*A)-3', 5'-D(*TP*TP*TP*GP*TP*AP*GP*GP*AP*CP*TP*GP*CP*CP*CP*TP*TP*TP*AP*AP*T)-3', Intron-associated endonuclease 1, ...
Authors:Edgell, D.R, Derbyshire, V, Van Roey, P, LaBonne, S, Stanger, M.J, Li, Z, Boyd, T.M, Shub, D.A, Belfort, M.
Deposit date:2004-04-22
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Intron-encoded homing endonuclease I-TevI also functions as a transcriptional autorepressor.
Nat.Struct.Mol.Biol., 11, 2004
1T69
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Crystal Structure of human HDAC8 complexed with SAHA
Descriptor: Histone deacetylase 8, OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE, ZINC ION
Authors:Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W.
Deposit date:2004-05-05
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure, 12, 2004
1T19
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Early intermediate IE2 from time-resolved crystallography of the E46Q mutant of PYP
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
Deposit date:2004-04-15
Release date:2005-01-18
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
1T91
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crystal structure of human small GTPase Rab7(GTP)
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-7
Authors:Song, H, Hong, W, Wu, M, Wang, T.
Deposit date:2004-05-14
Release date:2005-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for recruitment of RILP by small GTPase Rab7.
Embo J., 24, 2005
4Y7E
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BU of 4y7e by Molmil
Crystal structure of beta-mannanase from Streptomyces thermolilacinus with mannohexaose
Descriptor: CALCIUM ION, Endoglucanase, GLYCEROL, ...
Authors:Kumagai, Y, Yamashita, K, Okuyama, M, Hatanaka, T, Yao, M, Kimura, A.
Deposit date:2015-02-14
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The loop structure of Actinomycete glycoside hydrolase family 5 mannanases governs substrate recognition
Febs J., 282, 2015
7KYJ
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BU of 7kyj by Molmil
Structure of a GNAT superfamily PA3944 acetyltransferase in complex with zinc
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyltransferase PA3944, ...
Authors:Czub, M.P, Porebski, P.J, Cymborowski, M, Shabalin, I.G, Reidl, C.T, Becker, D.P, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-12-07
Release date:2020-12-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a GNAT superfamily PA3944 acetyltransferase in complex with zinc
To Be Published
1TDW
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Crystal structure of double truncated human phenylalanine hydroxylase BH4-responsive PKU mutant A313T.
Descriptor: FE (III) ION, Phenylalanine-4-hydroxylase
Authors:Erlandsen, H, Pey, A.L, Gamez, A, Perez, B, Desviat, L.R, Aguado, C, Koch, R, Surendran, S, Tyring, S, Matalon, R, Scriver, C.R, Ugarte, M, Martinez, A, Stevens, R.C.
Deposit date:2004-05-24
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Correction of kinetic and stability defects by tetrahydrobiopterin in phenylketonuria patients with certain phenylalanine hydroxylase mutations.
Proc.Natl.Acad.Sci.Usa, 101, 2004
7KOJ
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The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder494 inhibitor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]-5-{[(prop-2-en-1-yl)carbamoyl]amino}benzamide, ACETATE ION, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Lisnyak, V, Maki, S, Taylor, C, Zhang, Y, Zhou, Z, Azizi, S.A, Jones, K, Kathayat, R, Snyder, S.A, Dickinson, B.C, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-11-09
Release date:2020-11-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder494
to be published
1TG1
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BU of 1tg1 by Molmil
Crystal Structure of the complex formed between russells viper phospholipase A2 and a designed peptide inhibitor PHQ-Leu-Val-Arg-Tyr at 1.2A resolution
Descriptor: ACETIC ACID, METHANOL, Phospholipase A2, ...
Authors:Singh, N, Kaur, P, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Singh, T.P.
Deposit date:2004-05-28
Release date:2004-06-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal Structure of the complex formed between russells viper phospholipase A2 and a designed peptide inhibitor Cbz-dehydro-Leu-Val-Arg-Tyr at 1.2A resolution
To be Published
1T8Q
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Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
Descriptor: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, periplasmic, ...
Authors:Zhang, R, Kim, Y, Dementieva, I, Duke, N, Stols, L, Donnelly, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-13
Release date:2004-08-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
To be Published
3I90
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BU of 3i90 by Molmil
Crystal structure of human chromobox homolog 6 (CBX6) with H3K27 peptide
Descriptor: Chromobox protein homolog 6, H3K27 peptide
Authors:Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2009-07-10
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
1SSJ
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A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (BETA-ANOMER)
Descriptor: 5'-D(*CP*CP*AP*CP*(HOB)P*GP*GP*AP*AP*C)-3', 5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3'
Authors:Gomez-Pinto, I, Cubero, E, Kalko, S.G, Monaco, V, van der Marel, G, van Boom, J.H, Orozco, M, Gonzalez, C.
Deposit date:2004-03-24
Release date:2004-06-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct.
J.Biol.Chem., 279, 2004
4YC2
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Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 from E. coli in complex with the antibody A32.
Descriptor: The antibody A32 Fab heavy chain., The antibody A32 Fab light chain., The stabilized inner domain of clade A/E HIV-1 gp120 from E. coli
Authors:Tolbert, W.D, Gohain, N, Pazgier, M.
Deposit date:2015-02-19
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Paring Down HIV Env: Design and Crystal Structure of a Stabilized Inner Domain of HIV-1 gp120 Displaying a Major ADCC Target of the A32 Region.
Structure, 24, 2016
1TFO
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Ribonuclease from Escherichia coli complexed with its inhibitor protein
Descriptor: Colicin D, Colicin D immunity protein
Authors:Yajima, S, Nakanishi, K, Takahashi, K, Ogawa, T, Kezuka, Y, Hidaka, M, Nonaka, T, Ohsawa, K, Masaki, H.
Deposit date:2004-05-27
Release date:2005-03-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Relation between tRNase activity and the structure of colicin D according to X-ray crystallography
Biochem.Biophys.Res.Commun., 322, 2004
1SW0
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BU of 1sw0 by Molmil
Triosephosphate isomerase from Gallus gallus, loop 6 hinge mutant K174L, T175W
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-30
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SXI
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Structure of apo transcription regulator B. megaterium
Descriptor: Glucose-resistance amylase regulator, MAGNESIUM ION
Authors:Schumacher, M.A, Allen, G.S, Diel, M, Seidel, G, Hillen, W, Brennan, R.G.
Deposit date:2004-03-30
Release date:2004-10-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural studies on the apo transcription factor form B. megaterium
Cell(Cambridge,Mass.), 118, 2004
4YBL
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Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 in complex with the ADCC mediating ANTI-HIV-1 antibody A32
Descriptor: A32 antibody Fab heavy chain, A32 antibody light chain, Stabilized inner domain of clade A/E gp120
Authors:Tolbert, W.D, Gohain, N, Pazgier, M.
Deposit date:2015-02-18
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Paring Down HIV Env: Design and Crystal Structure of a Stabilized Inner Domain of HIV-1 gp120 Displaying a Major ADCC Target of the A32 Region.
Structure, 24, 2016
5MX3
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Structure of DC8E8 Fab crystallized at pH 8.5
Descriptor: antibody Fab heavy chain, antibody kappa chain
Authors:Skrabana, R, Novak, M, Cehlar, O, Kontsekova, E.
Deposit date:2017-01-20
Release date:2017-02-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structure of DC8E8 Fab crystallized at pH 8.5
To be published
2RN2
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STRUCTURAL DETAILS OF RIBONUCLEASE H FROM ESCHERICHIA COLI AS REFINED TO AN ATOMIC RESOLUTION
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Miyagawa, M, Matsushima, M, Ishikawa, M, Kanaya, S, Nakamura, H, Ikehara, M, Matsuzaki, T, Morikawa, K.
Deposit date:1992-04-15
Release date:1993-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural details of ribonuclease H from Escherichia coli as refined to an atomic resolution.
J.Mol.Biol., 223, 1992

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