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PDB: 51689 results

6IBP
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BU of 6ibp by Molmil
Structure of a psychrophilic CCA-adding enzyme at room temperature in ChipX microfluidic device
Descriptor: CCA-adding enzyme
Authors:de Wijn, R, Hennig, O, Rollet, K, Bluhm, A, Betat, H, Moerl, M, Lorber, B, Sauter, C.
Deposit date:2018-11-30
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.536 Å)
Cite:A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography.
Iucrj, 6, 2019
5H9A
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BU of 5h9a by Molmil
Crystal structure of the Apo form of human cellular retinol binding protein 1
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Retinol-binding protein 1
Authors:Golczak, M, Arne, J.M, Silvaroli, J.A, Kiser, P.D, Banerjee, S.
Deposit date:2015-12-26
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.381 Å)
Cite:Ligand Binding Induces Conformational Changes in Human Cellular Retinol-binding Protein 1 (CRBP1) Revealed by Atomic Resolution Crystal Structures.
J.Biol.Chem., 291, 2016
1COA
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BU of 1coa by Molmil
THE EFFECT OF CAVITY CREATING MUTATIONS IN THE HYDROPHOBIC CORE OF CHYMOTRYPSIN INHIBITOR 2
Descriptor: CHYMOTRYPSIN INHIBITOR 2
Authors:Jackson, S.E, Moracci, M, Elmasry, N, Johnson, C.M, Fersht, A.R.
Deposit date:1993-05-14
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Effect of cavity-creating mutations in the hydrophobic core of chymotrypsin inhibitor 2.
Biochemistry, 32, 1993
4N8D
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BU of 4n8d by Molmil
DPP4 complexed with syn-7aa
Descriptor: 1-(cis-1-phenyl-4-{[(2E)-3-phenylprop-2-en-1-yl]oxy}cyclohexyl)methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase 4, ...
Authors:Ostermann, N, Zink, F, Kroemer, M.
Deposit date:2013-10-17
Release date:2014-02-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery of C-(1-aryl-cyclohexyl)-methylamines as selective, orally available inhibitors of dipeptidyl peptidase IV.
Bioorg.Med.Chem.Lett., 24, 2014
5ULC
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BU of 5ulc by Molmil
PLASMODIUM FALCIPARUM BROMODOMAIN-CONTAINING PROTEIN PF10_0328
Descriptor: Bromodomain protein 1
Authors:Wernimont, A.K, Amaya, M.F, Lam, A, Ali, A, Zhang, A.Z, Kenzina, L, Lin, Y.H, MacKenzie, F, Kozieradzki, I, Cossar, D, Schapira, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Weigelt, J, Hui, R, Walker, J.R, Qiu, W, Brand, V, Structural Genomics Consortium (SGC)
Deposit date:2017-01-24
Release date:2017-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:PLASMODIUM FALCIPARUM BROMODOMAIN-CONTAINING PROTEIN PF10_0328
To be published
5V7Z
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BU of 5v7z by Molmil
SSNMR Structure of the Human RIP1/RIP3 Necrosome
Descriptor: PRO-LEU-VAL-ASN-ILE-TYR-ASN-CYS-SER-GLY-VAL-GLN-VAL-GLY-ASP, THR-ILE-TYR-ASN-SER-THR-GLY-ILE-GLN-ILE-GLY-ALA-TYR-ASN-TYR-MET-GLU-ILE
Authors:Mompean, M, Li, W, Li, J, Laage, S, Siemer, A.B, Wu, H, McDermott, A.E.
Deposit date:2017-03-21
Release date:2018-03-28
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex.
Cell, 173, 2018
5UML
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BU of 5uml by Molmil
CRYSTAL STRUCTURE OF HUMAN MDMX IN COMPLEX WITH 12-MER PEPTIDE INHIBITOR M3
Descriptor: PEPTIDE INHIBITOR M3, Protein Mdm4
Authors:Pazgier, M, Gohain, N, Tolbert, W.D.
Deposit date:2017-01-27
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Design of ultrahigh-affinity and dual-specificity peptide antagonists of MDM2 and MDMX for p53 activation
To Be Published
5UNE
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BU of 5une by Molmil
Dimerized Structure Gives Further Insight Into the Function of the Novel RNA Gene: HAR1
Descriptor: MAGNESIUM ION, RNA (47-MER)
Authors:Lares, M, Scott, W.G.
Deposit date:2017-01-30
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.900099 Å)
Cite:Dimerized Structure Gives Further Insight Into the Function of the Novel RNA Gene: HAR1
To Be Published
5UNM
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BU of 5unm by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, substrate free form with flexible loop
Descriptor: ATP-utilizing enzyme of the PP-loopsuperfamily, PHOSPHATE ION
Authors:Fellner, M, Desguin, B, Hausinger, R.P, Hu, J.
Deposit date:2017-01-31
Release date:2017-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4NEB
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BU of 4neb by Molmil
Previously de-ionized HEW lysozyme batch crystallized in 0.5 M MnCl2
Descriptor: CHLORIDE ION, Lysozyme C, MANGANESE (II) ION
Authors:Benas, P, Legrand, L, Ries-Kautt, M.
Deposit date:2013-10-29
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry.
Acta Crystallogr.,Sect.D, 70, 2014
5FB5
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BU of 5fb5 by Molmil
Crystal structure of the bacteriophage phi29 tail knob protein gp9
Descriptor: Distal tube protein
Authors:Xu, J.W, Gui, M, Wang, D.H, Xiang, Y.
Deposit date:2015-12-14
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The bacteriophage 29 tail possesses a pore-forming loop for cell membrane penetration.
Nature, 534, 2016
5D26
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BU of 5d26 by Molmil
First bromodomain of BRD4 bound to inhibitor XD28
Descriptor: (R,R)-2,3-BUTANEDIOL, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
Authors:Wohlwend, D, Huegle, M.
Deposit date:2015-08-05
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:4-Acyl Pyrrole Derivatives Yield Novel Vectors for Designing Inhibitors of the Acetyl-Lysine Recognition Site of BRD4(1).
J.Med.Chem., 59, 2016
5UQO
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BU of 5uqo by Molmil
Crystal structure of 2-methylcitrate synthase from Aspergillus fumigatus
Descriptor: 2-methylcitrate synthase, mitochondrial
Authors:Schlachter, C, Chruszcz, M.
Deposit date:2017-02-08
Release date:2018-02-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase.
Biol.Chem., 400, 2019
8BCQ
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BU of 8bcq by Molmil
N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (native crystal structure)
Descriptor: GLYCEROL, Glutamate--tRNA ligase, SULFATE ION
Authors:Benas, P, Jaramillo Ponce, J.R, Frugier, M, Sauter, C.
Deposit date:2022-10-17
Release date:2023-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Solution X-ray scattering highlights discrepancies in Plasmodium multi-aminoacyl-tRNA synthetase complexes.
Protein Sci., 32, 2023
5UQY
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BU of 5uqy by Molmil
Crystal structure of Marburg virus GP in complex with the human survivor antibody MR78
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN GP1, ...
Authors:Hashiguchi, T, Fusco, M.L, Hastie, K.M, Bomholdt, Z.A, Lee, J.E, Flyak, A.I, Matsuoka, R, Kohda, D, Yanagi, Y, Hammel, M, Crowe, J.E, Saphire, E.O.
Deposit date:2017-02-08
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for Marburg virus neutralization by a cross-reactive human antibody.
Cell, 160, 2015
1MIR
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BU of 1mir by Molmil
RAT PROCATHEPSIN B
Descriptor: PROCATHEPSIN B
Authors:Cygler, M, Sivaraman, J, Grochulski, P, Coulombe, R, Storer, A.C, Mort, J.S.
Deposit date:1996-01-12
Release date:1997-01-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of rat procathepsin B: model for inhibition of cysteine protease activity by the proregion.
Structure, 4, 1996
5KR4
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BU of 5kr4 by Molmil
Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
Descriptor: 1,2-ETHANEDIOL, 4-aminobutyrate transaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Wilding, M, Newman, J, Peat, T.S, Scott, C.
Deposit date:2016-07-06
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017
1CWX
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BU of 1cwx by Molmil
SOLUTION STRUCTURE OF THE HEPATITIS C VIRUS N-TERMINAL CAPSID PROTEIN 2-45 [C-HCV(2-45)]
Descriptor: HEPATITIS C VIRUS CAPSID PROTEIN
Authors:Ladaviere, L, Deleage, G, Montserret, R, Dalbon, P, Jolivet, M, Penin, F.
Deposit date:1999-08-27
Release date:1999-08-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Analysis of the Immunodominant Antigenic Region of the Hepatitis C Virus Capsid Protein by NMR
To be Published
1D0B
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BU of 1d0b by Molmil
INTERNALIN B LEUCINE RICH REPEAT DOMAIN
Descriptor: CALCIUM ION, INTERNALIN B
Authors:Marino, M, Braun, L, Cossart, P, Ghosh, P.
Deposit date:1999-09-09
Release date:2000-01-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of the lnlB leucine-rich repeats, a domain that triggers host cell invasion by the bacterial pathogen L. monocytogenes.
Mol.Cell, 4, 1999
1CX8
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BU of 1cx8 by Molmil
CRYSTAL STRUCTURE OF THE ECTODOMAIN OF HUMAN TRANSFERRIN RECEPTOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SAMARIUM (III) ION, TRANSFERRIN RECEPTOR PROTEIN
Authors:Lawrence, C.M, Ray, S, Babyonyshev, M, Galluser, R, Borhani, D, Harrison, S.C.
Deposit date:1999-08-28
Release date:1999-09-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the ectodomain of human transferrin receptor.
Science, 286, 1999
1D06
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BU of 1d06 by Molmil
STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, nitrogen fixation regulatory protein fixL
Authors:Miyatake, H, Mukai, M, Park, S.-Y, Adachi, S, Tamura, K, Nakamura, H, Nakamura, K, Tsuchiya, T, Iizuka, T, Shiro, Y.
Deposit date:1999-09-09
Release date:2000-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies
J.MOL.BIOL., 301, 2000
5FCY
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BU of 5fcy by Molmil
Structure of Anabaena (Nostoc) sp. PCC 7120 Red Carotenoid Protein binding a mixture of carotenoids
Descriptor: BETA-CAROTENE, Red carotenoid protein (RCP)
Authors:Sutter, M, Leverrenz, R.L, Kerfeld, C.A.
Deposit date:2015-12-15
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.508 Å)
Cite:Structure, Diversity, and Evolution of a New Family of Soluble Carotenoid-Binding Proteins in Cyanobacteria.
Mol Plant, 9, 2016
1K2X
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BU of 1k2x by Molmil
Crystal structure of putative asparaginase encoded by Escherichia coli ybiK gene
Descriptor: CHLORIDE ION, Putative L-asparaginase, SODIUM ION
Authors:Borek, D, Jaskolski, M.
Deposit date:2001-09-30
Release date:2003-09-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal packing of plant-type L-asparaginase from Escherichia coli.
Acta Crystallogr.,Sect.D, 64, 2008
1D1Q
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BU of 1d1q by Molmil
CRYSTAL STRUCTURE OF A YEAST LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE (LTP1) COMPLEXED WITH THE SUBSTRATE PNPP
Descriptor: 4-NITROPHENYL PHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Wang, S, Tabernero, L, Zhang, M, Harms, E, Van Etten, R.L, Staufacher, C.V.
Deposit date:1999-09-20
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of a low-molecular weight protein tyrosine phosphatase from Saccharomyces cerevisiae and its complex with the substrate p-nitrophenyl phosphate.
Biochemistry, 39, 2000
5FTY
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BU of 5fty by Molmil
Structure of surface layer protein SbsC, domains 6-7 (monoclinic form)
Descriptor: CALCIUM ION, SURFACE LAYER PROTEIN
Authors:Dordic, A, Pavkov-Keller, T, Eder, M, Egelseer, E.M, Davis, K, Mills, D, Sleytr, U.B, Kuehlbrandt, W, Vonck, J, Keller, W.
Deposit date:2016-01-18
Release date:2017-02-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Surface Layer Protein Sbsc, Domains 6-7 (Monoclinic Form)
To be Published

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