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PDB: 51689 results

6MDP
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BU of 6mdp by Molmil
The D1 and D2 domain rings of NSF engaging the SNAP-25 N-terminus within the 20S supercomplex (focused refinement on D1/D2 rings, class 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Synaptosomal-associated protein 25, ...
Authors:White, K.I, Zhao, M, Brunger, A.T.
Deposit date:2018-09-04
Release date:2018-09-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
6ONW
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BU of 6onw by Molmil
Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Sel1 repeat protein
Authors:Chang, C, Tesar, C, Endres, M, Babnigg, G, Hassan, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2019-04-22
Release date:2020-04-29
Method:X-RAY DIFFRACTION (2.951 Å)
Cite:Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
To Be Published
6OM3
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BU of 6om3 by Molmil
Crystal structure of the Orc1 BAH domain in complex with a nucleosome core particle
Descriptor: DNA (146-MER), DNA (147-MER), Histone H2A, ...
Authors:De Ioannes, P.E, Wang, M, Armache, K.-J.
Deposit date:2019-04-18
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure and function of the Orc1 BAH-nucleosome complex.
Nat Commun, 10, 2019
1X4F
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BU of 1x4f by Molmil
Solution structure of the second RRM domain in Matrin 3
Descriptor: Matrin 3
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-14
Release date:2005-11-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second RRM domain in Matrin 3
To be Published
6EFK
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BU of 6efk by Molmil
Crystal structure of the human CHIP TPR domain in complex with a 5mer acetylated HSP70 peptide
Descriptor: ACE-ILE-GLU-GLU-VAL-ASP, E3 ubiquitin-protein ligase CHIP, SODIUM ION
Authors:Basu, K, Ravalin, M, Bohn, M.-F, Craik, C.S, Gestwicki, J.E.
Deposit date:2018-08-16
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Specificity for latent C termini links the E3 ubiquitin ligase CHIP to caspases.
Nat.Chem.Biol., 15, 2019
6UPH
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BU of 6uph by Molmil
Structure of a Yeast Centromeric Nucleosome at 2.7 Angstrom resolution
Descriptor: DNA (119-MER), Histone H2A, Histone H2B.1, ...
Authors:Migl, D, Kschonsak, M, Arthur, C.P, Khin, Y, Harrison, S.C, Ciferri, C, Dimitrova, Y.N.
Deposit date:2019-10-17
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryoelectron Microscopy Structure of a Yeast Centromeric Nucleosome at 2.7 angstrom Resolution.
Structure, 28, 2020
6LKE
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BU of 6lke by Molmil
in meso full-length rat KMO in complex with an inhibitor identified via DNA-encoded chemical library screening
Descriptor: 4-chloranyl-2-[[5-chloranyl-2-(5-methoxy-1,3-dihydroisoindol-2-yl)-1,3-thiazol-4-yl]carbonyl-methyl-amino]-5-fluoranyl-benzoic acid, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Mimasu, S, Yamagishi, H, Kiyohara, M, Hupp, D.C, Liu, J, Kakefuda, K, Okuda, T.
Deposit date:2019-12-19
Release date:2020-12-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Full-length in meso structure and mechanism of rat kynurenine 3-monooxygenase inhibition.
Commun Biol, 4, 2021
6LL5
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BU of 6ll5 by Molmil
Crystal structure of KpFtsZ (residues 11-316)
Descriptor: Cell division protein FtsZ, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE
Authors:Yoshizawa, T, Fujita, J, Terakado, H, Ozawa, M, Kuroda, N, Tanaka, S, Uehara, R, Matsumura, H.
Deposit date:2019-12-21
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of the cell-division protein FtsZ from Klebsiella pneumoniae and Escherichia coli.
Acta Crystallogr.,Sect.F, 76, 2020
6V11
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BU of 6v11 by Molmil
Lon Protease from Yersinia pestis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease
Authors:Shin, M, Puchades, C, Asmita, A, Puri, N, Adjei, E, Wiseman, R.L, Karzai, A.W, Lander, G.C.
Deposit date:2019-11-19
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for distinct operational modes and protease activation in AAA+ protease Lon.
Sci Adv, 6, 2020
4M8X
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BU of 4m8x by Molmil
GS-8374, a Novel Phosphonate-Containing Inhibitor of HIV-1 Protease, Effectively Inhibits HIV PR Mutants with Amino Acid Insertions
Descriptor: DIETHYL ({4-[(2S,3R)-2-({[(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YLOXY]CARBONYL}AMINO)-3-HYDROXY-4-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}BUTYL]PHENOXY}METHYL)PHOSPHONATE, Protease
Authors:Grantz saskova, K, Brynda, J, Rezacova, P, Kozisek, M, Konvalinka, J.
Deposit date:2013-08-14
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:GS-8374, a prototype phosphonate-containing inhibitor of HIV-1 protease, effectively inhibits protease mutants with amino acid insertions.
J.Virol., 88, 2014
6ONF
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BU of 6onf by Molmil
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A02.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, clade A/E 93TH057 HIV-1 gp120 core, ...
Authors:Tolbert, W.D, Sherburn, R, Pazgier, M.
Deposit date:2019-04-22
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:A New Family of Small-Molecule CD4-Mimetic Compounds Contacts Highly Conserved Aspartic Acid 368 of HIV-1 gp120 and Mediates Antibody-Dependent Cellular Cytotoxicity.
J.Virol., 93, 2019
6LMT
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BU of 6lmt by Molmil
Cryo-EM structure of the killifish CALHM1
Descriptor: CHOLESTEROL HEMISUCCINATE, Calcium homeostasis modulator 1
Authors:Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2019-12-26
Release date:2020-07-29
Last modified:2020-09-09
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6IEM
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BU of 6iem by Molmil
Argininosuccinate lyase from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15-PENTAOXAHEPTADECANE, Argininosuccinate lyase, ...
Authors:Paul, A, Mishra, A, Surolia, A, Vijayan, M.
Deposit date:2018-09-14
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies on M. tuberculosis argininosuccinate lyase and its liganded complex: Insights into catalytic mechanism.
IUBMB Life, 71, 2019
6V69
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BU of 6v69 by Molmil
Structures of GCP4 and GCP5 in the native human gamma-tubulin ring complex
Descriptor: Gamma-tubulin complex component 4, Gamma-tubulin complex component 5
Authors:Wieczorek, M, Urnavicius, L, Ti, S, Molloy, K.R, Chait, B.T, Kapoor, T.M.
Deposit date:2019-12-04
Release date:2020-01-01
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Asymmetric Molecular Architecture of the Human gamma-Tubulin Ring Complex.
Cell, 180, 2020
1WES
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BU of 1wes by Molmil
Solution structure of PHD domain in inhibitor of growth family, member 1-like
Descriptor: ZINC ION, inhibitor of growth family, member 1-like
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in inhibitor of growth family, member 1-like
To be Published
1ISJ
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BU of 1isj by Molmil
Crystal Structure Analysis of BST-1/CD157 complexed with NMN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, bone marrow stromal cell antigen 1
Authors:Yamamoto-Katayama, S, Ariyoshi, M, Ishihara, K, Hirano, T, Jingami, H, Morikawa, K.
Deposit date:2001-12-05
Release date:2002-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic studies on human BST-1/CD157 with ADP-ribosyl cyclase and NAD glycohydrolase activities.
J.Mol.Biol., 316, 2002
1UAN
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BU of 1uan by Molmil
Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
Descriptor: hypothetical protein TT1542
Authors:Handa, N, Terada, T, Tame, J.R.H, Park, S.-Y, Kinoshita, K, Ota, M, Nakamura, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-03-12
Release date:2003-08-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
PROTEIN SCI., 12, 2003
7NPQ
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BU of 7npq by Molmil
Crystal structure of the human LL37(17-29) I24C mutant antimicrobial peptide
Descriptor: Cathelicidin antimicrobial peptide
Authors:Landau, M, Engelberg, Y.
Deposit date:2021-02-28
Release date:2022-02-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rare by Natural Selection: Disulfide-Bonded Supramolecular Antimicrobial Peptides.
Biomacromolecules, 23, 2022
7S3J
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BU of 7s3j by Molmil
Crystal Structure of AspB P450 in complex with brevianamide F substrates
Descriptor: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, AspB, GLYCEROL, ...
Authors:Newmister, S.A, Shende, V.V, Harris, N.R, Sanders, J.N, Khatri, Y, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2021-09-07
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular Dynamics Simulations Guide Chimeragenesis and Engineered Control of Chemoselectivity in Diketopiperazine Dimerases.
Angew.Chem.Int.Ed.Engl., 62, 2023
6EIC
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BU of 6eic by Molmil
Crystal structure of Rv0183, a Monoglyceride Lipase from Mycobacterium Tuberculosis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Mycobacterium Tuberculosis Monoglyceride Lipase, NITRATE ION, ...
Authors:Aschauer, P, Pavkov-Keller, T, Oberer, M.
Deposit date:2017-09-19
Release date:2018-06-27
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of monoacylglycerol lipase from M. tuberculosis reveals the basis for specific inhibition.
Sci Rep, 8, 2018
7ZCS
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BU of 7zcs by Molmil
Nitrite-bound MSOX movie series dataset 65 (52 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - water ligand (final)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
Deposit date:2022-03-28
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
1UBF
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BU of 1ubf by Molmil
MsREcA-ATPgS complex
Descriptor: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RecA
Authors:Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2003-04-04
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
7NH6
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BU of 7nh6 by Molmil
Crystal structure of human carbonic anhydrase II with 3-(3-((1-(2-(hydroxymethyl)-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-3-yl)-1H-1,2,3-triazol-4-yl)methyl)ureido)benzenesulfonamide
Descriptor: 3-(3-((1-(2-(hydroxymethyl)-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-3-yl)-1H-1,2,3-triazol-4-yl)methyl)ureido)benzenesulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2021-02-10
Release date:2022-02-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Mechanisms of the Antiproliferative and Antitumor Activity of Novel Telomerase-Carbonic Anhydrase Dual-Hybrid Inhibitors.
J.Med.Chem., 64, 2021
6LTG
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BU of 6ltg by Molmil
Crystal structure of the Fab fragment of murine monoclonal antibody OHV-3 against Human herpesvirus 6B
Descriptor: MAGNESIUM ION, antibody Fab fragment H-chain, antibody Fab fragment L-chain
Authors:Nishimura, M, Novita, B.D, Kato, T, Tjan, L.H, Wang, B, Wakata, A, Poetranto, A.L, Kawabata, A, Tang, H, Aoshi, T, Mori, Y.
Deposit date:2020-01-22
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural basis for the interaction of human herpesvirus 6B tetrameric glycoprotein complex with the cellular receptor, human CD134.
Plos Pathog., 16, 2020
6ORK
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BU of 6ork by Molmil
Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
Descriptor: Sel1 repeat protein
Authors:Chang, C, Tesar, C, Endres, M, Babnigg, G, Hassan, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2019-04-30
Release date:2020-05-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
To Be Published

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數據於2024-09-04公開中

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