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PDB: 51938 results

1ZSY
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The structure of human mitochondrial 2-enoyl thioester reductase (CGI-63)
Descriptor: GLYCEROL, MITOCHONDRIAL 2-ENOYL THIOESTER REDUCTASE, SULFATE ION
Authors:Lukacik, P, Shafqat, N, Kavanagh, K.L, Johansson, C, Smee, C, Edwards, A, Arrowsmith, C, Sundstrom, M, von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2005-05-25
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of human mitochondrial 2-enoyl thioester reductase (CGI-63)
To be Published
1ZSL
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Factor XI complexed with a pyrimidinone inhibitor
Descriptor: 2-(2-(3,4-DICHLOROPHENYL)-5-(ISOPROPYLAMINO)-6-OXOPYRIMIDIN-1(6H)-YL)-N-((S)-1-OXO-1-(THIAZOL-2-YL)-5-GUANIDINOPENTAN-2-YL)ACETAMIDE, Coagulation factor XI
Authors:Nagafuji, P, Jin, L, Rynkiewicz, M, Quinn, J, Bibbins, F, Meyers, H, Babine, R, Strickler, J, Abdel-Meguid, S.
Deposit date:2005-05-24
Release date:2006-05-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Pyrimidinone Inhibitors of a Thrombolytic Protease
To be Published
1ZTG
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human alpha polyC binding protein KH1
Descriptor: 5'-D(P*CP*CP*CP*TP*CP*CP*CP*T)-3', POLY(RC)-BINDING PROTEIN 1
Authors:Sidiqi, M, Wilce, J.A, Barker, A, Schmidgerger, J, Leedman, P.J, Wilce, M.C.J.
Deposit date:2005-05-27
Release date:2006-05-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Nucleic Acids Res., 40, 2012
8FFJ
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Structure of Zanidatamab bound to HER2
Descriptor: Receptor tyrosine-protein kinase erbB-2, Zanidatamab Heavy Chain A, Zanidatamab Heavy Chain B, ...
Authors:Worrall, L.J, Atkinson, C.E, Sanches, M, Dixit, S, Strynadka, N.C.J.
Deposit date:2022-12-08
Release date:2023-02-22
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:An anti-HER2 biparatopic antibody that induces unique HER2 clustering and complement-dependent cytotoxicity.
Nat Commun, 14, 2023
1ZXI
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Reconstituted CO dehydrogenase from Oligotropha carboxidovorans
Descriptor: COPPER (II) ION, CU(I)-S-MO(VI)(=O)OH CLUSTER, Carbon monoxide dehydrogenase large chain, ...
Authors:Resch, M, Dobbek, H, Meyer, O.
Deposit date:2005-06-08
Release date:2005-10-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and functional reconstruction in situ of the [CuSMoO(2)] active site of carbon monoxide dehydrogenase from the carbon monoxide oxidizing eubacterium Oligotropha carboxidovorans
J.Biol.Inorg.Chem., 10, 2005
6W4F
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BU of 6w4f by Molmil
NMR-driven structure of KRAS4B-GDP homodimer on a lipid bilayer nanodisc
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
Authors:Lee, K, Fang, Z, Enomoto, M, Gasmi-Seabrook, G.M, Zheng, L, Marshall, C.B, Ikura, M.
Deposit date:2020-03-10
Release date:2020-04-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two Distinct Structures of Membrane-Associated Homodimers of GTP- and GDP-Bound KRAS4B Revealed by Paramagnetic Relaxation Enhancement.
Angew.Chem.Int.Ed.Engl., 59, 2020
1ZUG
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STRUCTURE OF PHAGE 434 CRO PROTEIN, NMR, 20 STRUCTURES
Descriptor: PHAGE 434 CRO PROTEIN
Authors:Padmanabhan, S, Jimenez, M.A, Gonzalez, C, Sanz, J.M, Gimenez-Gallego, G, Rico, M.
Deposit date:1997-03-14
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure and stability of phage 434 Cro protein.
Biochemistry, 36, 1997
1ZPS
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Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI
Descriptor: ACETIC ACID, CADMIUM ION, Phosphoribosyl-AMP cyclohydrolase
Authors:Sivaraman, J, Myers, R.S, Boju, L, Sulea, T, Cygler, M, Davisson, V.J, Schrag, J.D, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2005-05-17
Release date:2005-08-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Methanobacterium thermoautotrophicum Phosphoribosyl-AMP Cyclohydrolase HisI.
Biochemistry, 44, 2005
1ZR7
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Solution structure of the first WW domain of FBP11
Descriptor: huntingtin-interacting protein HYPA/FBP11
Authors:Kato, Y, Hino, Y, Tanokura, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2006-05-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and binding specificity of FBP11/HYPA WW domain as Group-II/III
Proteins, 63, 2006
1ZRS
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wild-type LD-carboxypeptidase
Descriptor: hypothetical protein
Authors:Korza, H.J, Bochtler, M.
Deposit date:2005-05-21
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with a Ser-His-Glu triad and a nucleophilic elbow.
J.Biol.Chem., 280, 2005
1PXB
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BU of 1pxb by Molmil
CRYSTAL STRUCTURES OF MUTANT PSEUDOMONAS AERUGINOSA P-HYDROXYBENZOATE HYDROXYLASE: THE TYR201PHE, TYR385PHE, AND ASN300ASP VARIANTS
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, P-HYDROXYBENZOATE HYDROXYLASE, P-HYDROXYBENZOIC ACID
Authors:Lah, M.S, Palfey, B.A, Schreuder, H.A, Ludwig, M.L.
Deposit date:1994-09-27
Release date:1995-02-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of mutant Pseudomonas aeruginosa p-hydroxybenzoate hydroxylases: the Tyr201Phe, Tyr385Phe, and Asn300Asp variants.
Biochemistry, 33, 1994
1ZY2
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BU of 1zy2 by Molmil
Crystal structure of the phosphorylated receiver domain of the transcription regulator NtrC1 from Aquifex aeolicus
Descriptor: MAGNESIUM ION, transcriptional regulator NtrC1
Authors:Doucleff, M, Chen, B, Maris, A.E, Wemmer, D.E, Kondrashkina, E, Nixon, B.T.
Deposit date:2005-06-09
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Negative regulation of AAA + ATPase assembly by two component receiver domains: a transcription activation mechanism that is conserved in mesophilic and extremely hyperthermophilic bacteria
J.Mol.Biol., 353, 2005
7TBM
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BU of 7tbm by Molmil
Composite structure of the dilated human nuclear pore complex (NPC) generated with a 37A in situ cryo-ET map of CD4+ T cell NPC
Descriptor: DDX19, NUP107 CTD, NUP107 NTD, ...
Authors:Bley, C.J, Nie, S, Mobbs, G.W, Petrovic, S, Gres, A.T, Liu, X, Mukherjee, S, Harvey, S, Huber, F.M, Lin, D.H, Brown, B, Tang, A.W, Rundlet, E.J, Correia, A.R, Chen, S, Regmi, S.G, Stevens, T.A, Jette, C.A, Dasso, M, Patke, A, Palazzo, A.F, Kossiakoff, A.A, Hoelz, A.
Deposit date:2021-12-22
Release date:2022-06-15
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (37 Å)
Cite:Architecture of the cytoplasmic face of the nuclear pore.
Science, 376, 2022
261L
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BU of 261l by Molmil
STRUCTURAL CHARACTERISATION OF AN ENGINEERED TANDEM REPEAT CONTRASTS THE IMPORTANCE OF CONTEXT AND SEQUENCE IN PROTEIN FOLDING
Descriptor: LYSOZYME
Authors:Sagermann, M, Baase, W.A, Matthews, B.W.
Deposit date:1999-05-11
Release date:1999-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural characterization of an engineered tandem repeat contrasts the importance of context and sequence in protein folding.
Proc.Natl.Acad.Sci.USA, 96, 1999
1ZTJ
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BU of 1ztj by Molmil
Crystal Structure of the Catalytic Domain of Coagulation Factor XI in Complex with 2-(5-Benzylamino-2-methylsulfanyl-6-oxo-6H-pyrimidin-1-yl)-N-[4-guanidino-1-(thiazole-2-carbonyl)-butyl]-acetamide
Descriptor: 2-(5-BENZYLAMINO-2-METHYLSULFANYL-6-OXO-6H-PYRIMIDIN-1-YL)-N-[4-GUANIDINO-1-(THIAZOLE-2-CARBONYL)-BUTYL]-ACETAMIDE, BICARBONATE ION, Coagulation factor XI, ...
Authors:Nagafuji, P, Jin, L, Rynkiewicz, M, Quinn, J, Bibbins, F, Meyers, H, Babine, R.E, Strickler, J.E, Abdel-Meguid, S.S.
Deposit date:2005-05-27
Release date:2006-05-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Pyrimidinone Inhibitors of a Thrombolytic Protease
To be Published
1ZUU
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Crystal structure of the yeast Bzz1 first SH3 domain at 0.97-A resolution
Descriptor: BZZ1 protein, MAGNESIUM ION, UNKNOWN ATOM OR ION
Authors:Kursula, P, Kursula, I, Lehmann, F, Zou, P, Song, Y.H, Wilmanns, M.
Deposit date:2005-06-01
Release date:2006-09-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Structural genomics of yeast SH3 domains
To be Published
1ZUZ
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BU of 1zuz by Molmil
Calmodulin in complex with a mutant peptide from human DRP-1 kinase
Descriptor: CALCIUM ION, DRP-1 kinase, calmodulin
Authors:Kursula, P, Vahokoski, J, Wilmanns, M.
Deposit date:2005-06-01
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Recognition of human death-associated protein kinases by calmodulin
To be Published
1ZV7
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BU of 1zv7 by Molmil
A structure-based mechanism of SARS virus membrane fusion
Descriptor: CHLORIDE ION, spike glycoprotein
Authors:Deng, Y, Liu, J, Zheng, Q, Yong, W, Dai, J, Lu, M.
Deposit date:2005-06-01
Release date:2006-05-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures and Polymorphic Interactions of Two Heptad-Repeat Regions of the SARS Virus S2 Protein.
Structure, 14, 2006
6BJM
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BU of 6bjm by Molmil
Human ABO(H) blood group glycosyltransferase GTB R188K mutant
Descriptor: ABO blood group (Transferase A, alpha 1-3-N-acetylgalactosaminyltransferase transferase B, alpha 1-3-galactosyltransferase), ...
Authors:Gagnon, S.M.L, Legg, M.S.G, Evans, S.V.
Deposit date:2017-11-06
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Conserved residues Arg188 and Asp302 are critical for active site organization and catalysis in human ABO(H) blood group A and B glycosyltransferases.
Glycobiology, 28, 2018
1ZTQ
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BU of 1ztq by Molmil
Crystal structure of the catalytic domain of MMP-13 complexed with WAY-033
Descriptor: CALCIUM ION, Collagenase 3, N-({4'-[(1-BENZOFURAN-2-YLCARBONYL)AMINO]-1,1'-BIPHENYL-4-YL}SULFONYL)-L-VALINE, ...
Authors:Wu, J, Rush III, T.S, Hotchandani, R, Du, X, Geck, M, Collins, E, Xu, Z.B, Skotnicki, J, Levin, J.I, Lovering, F.
Deposit date:2005-05-27
Release date:2006-05-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of potent and selective MMP-13 inhibitors
Bioorg.Med.Chem.Lett., 15, 2005
1ZWS
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BU of 1zws by Molmil
Crystal structure of the catalytic domain of human DRP-1 kinase
Descriptor: DAP-kinase related protein 1
Authors:Kursula, P, Schunck, H, Wilmanns, M.
Deposit date:2005-06-06
Release date:2006-10-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the catalytic domain of human DRP-1 kinase
To be Published
1ZXC
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BU of 1zxc by Molmil
Crystal structure of catalytic domain of TNF-alpha converting enzyme (TACE) with inhibitor
Descriptor: (3S)-4-{[4-(BUT-2-YNYLOXY)PHENYL]SULFONYL}-N-HYDROXY-2,2-DIMETHYLTHIOMORPHOLINE-3-CARBOXAMIDE, ADAM 17, ZINC ION
Authors:Levin, J.I, Chen, J.M, Laakso, L.M, Du, M, Schmid, J, Xu, W, Cummons, T, Xu, J, Zhang, Y, Jin, G, Cowling, R, Barone, D, Skotnicki, J.S.
Deposit date:2005-06-07
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Acetylenic TACE inhibitors. Part 2: SAR of six-membered cyclic sulfonamide hydroxamates.
Bioorg.Med.Chem.Lett., 15, 2005
207D
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BU of 207d by Molmil
SOLUTION STRUCTURE OF MITHRAMYCIN DIMERS BOUND TO PARTIALLY OVERLAPPING SITES ON DNA
Descriptor: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranose-(1-3)-2,6-dideoxy-beta-D-galactopyranose-(1-3)-beta-D-Olivopyranose, DNA (5'-D(*TP*AP*GP*CP*TP*AP*GP*CP*TP*A)-3'), ...
Authors:Sastry, M, Fiala, R, Patel, D.J.
Deposit date:1995-04-20
Release date:1995-09-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of mithramycin dimers bound to partially overlapping sites on DNA.
J.Mol.Biol., 251, 1995
1ZRB
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Thrombin in complex with an azafluorenyl inhibitor 23b
Descriptor: 11-peptide hirudin fragment, 3-AZA-9-HYDROXY-9-FLUORENYLCARBONYL-L-PROLYL-2-AMINOMETHYL-5-CHLOROBENZYLAMIDE, N-OXIDE, ...
Authors:Stauffer, K.J, Williams, P.D, Selnick, H.G, Nantermet, P.G, Newton, C.L, Homnick, C.F, Zrada, M.M, Lewis, S.D, Lucas, B.J, Krueger, J.A, Pietrak, B.L, Lyle, E.A, Singh, R, Miller-Stein, C, White, R.B, Wong, B, Wallace, A.A, Sitko, G.R, Cook, J.J, Holahan, M.A, Stranieri-Michener, M, Leonard, Y.M, Lynch Jr, J.J, McMasters, D.R, Yan, Y.
Deposit date:2005-05-19
Release date:2005-06-07
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:9-hydroxyazafluorenes and their use in thrombin inhibitors
J.Med.Chem., 48, 2005
7DZY
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Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490
Descriptor: Fab Heavy chain of enhancing antibody 2490, Fab light chain of enhancing antibody 2490, Spike glycoprotein
Authors:Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
Deposit date:2021-01-26
Release date:2021-06-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021

225681

數據於2024-10-02公開中

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