Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52230 results

3D74
DownloadVisualize
BU of 3d74 by Molmil
Crystal structure of a pheromone binding protein mutant D35A, from Apis mellifera, soaked at pH 5.5
Descriptor: N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2008-05-20
Release date:2009-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
4U5N
DownloadVisualize
BU of 4u5n by Molmil
IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR
Descriptor: Importin subunit alpha-1, N~2~-[4-(pyridin-3-yl)benzyl]-L-lysyl-N-[(1R,2S,3R)-1-{[(2R)-1-amino-1-oxo-3-phenylpropan-2-yl]amino}-1,3-dihydroxybutan-2-yl]glycinamide
Authors:Stewart, M, Valkov, E, Holvey, R.S.
Deposit date:2014-07-25
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design.
Chemmedchem, 10, 2015
4U5S
DownloadVisualize
BU of 4u5s by Molmil
IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR
Descriptor: Importin subunit alpha-1, N-[(2S)-2-[(N~2~-acetyl-D-lysyl)amino]-3-(pyridin-3-ylmethoxy)propyl]-L-allothreonyl-D-phenylalaninamide
Authors:Stewart, M, Valkov, E, Holvey, R.S.
Deposit date:2014-07-25
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design.
Chemmedchem, 10, 2015
7UOD
DownloadVisualize
BU of 7uod by Molmil
Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with 2,4-dichloro-phenoxyacetic acid
Descriptor: (2,4-DICHLOROPHENOXY)ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Sousa, J.P, Bezerra, E.H.S, Sales, M.V, Queiroz, P.P, da Silva, F.M.S, Carvalho, C.P.S, Freire, V.N, Rocha, B.A.M.
Deposit date:2022-04-12
Release date:2023-04-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of Canavalia maritima lectin complexed with auxins
To Be Published
4U28
DownloadVisualize
BU of 4u28 by Molmil
Crystal structure of apo Phosphoribosyl isomerase A from Streptomyces sviceus ATCC 29083
Descriptor: PHOSPHATE ION, Phosphoribosyl isomerase A
Authors:Chang, C, Verduzco-Castro, E.A, Endres, M, Barona-Gomez, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-07-16
Release date:2014-07-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Co-occurrence of analogous enzymes determines evolution of a novel ( beta alpha )8-isomerase sub-family after non-conserved mutations in flexible loop.
Biochem. J., 473, 2016
7UN2
DownloadVisualize
BU of 7un2 by Molmil
Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with Indole-3-butyric acid
Descriptor: 3-INDOLEBUTYRIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:de Sousa, J.P, Bezerra, E.H.S, Sales, M.V, Queiroz, P.P, da Silva, F.M.S, Carvalho, C.P.S, Freire, V.N, Rocha, B.A.M.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of Canavalia maritima lectin complexed with auxins
To Be Published
4TW9
DownloadVisualize
BU of 4tw9 by Molmil
Difluoro-dioxolo-benzoimidazol-benzamides as potent inhibitors of CK1delta and epsilon with nanomolar inhibitory activity on cancer cell proliferation
Descriptor: CHLORIDE ION, Casein kinase I isoform delta, N-(2,2-difluoro-5H-[1,3]dioxolo[4,5-f]benzimidazol-6-yl)-2-{[2-(trifluoromethoxy)benzoyl]amino}-1,3-thiazole-4-carboxamide, ...
Authors:Richter, J, Bischof, J, Zaja, M, Kohlhof, H, Othersen, O, Vitt, D, Alscher, V, Pospiech, I, Garcia-Reyes, B, Berg, S, Leban, J, Knippschild, U.
Deposit date:2014-06-30
Release date:2014-07-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Difluoro-dioxolo-benzoimidazol-benzamides As Potent Inhibitors of CK1 delta and epsilon with Nanomolar Inhibitory Activity on Cancer Cell Proliferation.
J.Med.Chem., 57, 2014
4TWH
DownloadVisualize
BU of 4twh by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant F16'S
Descriptor: Cys-loop ligand-gated ion channel
Authors:Ulens, C, Spurny, R, Thompson, A.J, Alqazzaz, M, Debaveye, S, Lu, H, Price, K, Villalgordo, J.M, Tresadern, G, Lynch, J.W, Lummis, S.C.R.
Deposit date:2014-06-30
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Prokaryote Ligand-Gated Ion Channel ELIC Captured in a Pore Blocker-Bound Conformation by the Alzheimer's Disease Drug Memantine.
Structure, 22, 2014
4U4F
DownloadVisualize
BU of 4u4f by Molmil
Structure of GluA2* in complex with partial agonist (S)-5-Nitrowillardiine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(5-nitro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine, ...
Authors:Yelshanskaya, M.V, Li, M, Sobolevsky, A.I.
Deposit date:2014-07-23
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.79 Å)
Cite:Structure of an agonist-bound ionotropic glutamate receptor.
Science, 345, 2014
4U4P
DownloadVisualize
BU of 4u4p by Molmil
Crystal structure of the human condensin SMC hinge domain heterodimer with short coiled coils
Descriptor: Structural maintenance of chromosomes protein 2, Structural maintenance of chromosomes protein 4
Authors:Uchiyama, S, Kawahara, K, Hosokawa, Y, Fukakusa, S, Oki, H, Nakamura, S, Noda, M, Takino, R, Miyahara, Y, Maruno, T, Kobayashi, Y, Ohkubo, T, Fukui, K.
Deposit date:2014-07-24
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural basis for dimer information and DNA recognition of human SMC proteins
to be published
4U4V
DownloadVisualize
BU of 4u4v by Molmil
Structure of a nitrate/nitrite antiporter NarK in apo inward-open state
Descriptor: NICKEL (II) ION, Nitrate/nitrite transporter NarK, OLEIC ACID
Authors:Fukuda, M, Takeda, H, Kato, H.E, Doki, S, Ito, K, Maturana, A.D, Ishitani, R, Nureki, O.
Deposit date:2014-07-24
Release date:2015-07-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for dynamic mechanism of nitrate/nitrite antiport by NarK
Nat Commun, 6, 2015
4U4W
DownloadVisualize
BU of 4u4w by Molmil
Structure of a nitrate/nitrite antiporter NarK in nitrate-bound occluded state
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, NITRATE ION, Nitrate/nitrite transporter NarK, ...
Authors:Fukuda, M, Takeda, H, Kato, H.E, Doki, S, Ito, K, Maturana, A.D, Ishitani, R, Nureki, O.
Deposit date:2014-07-24
Release date:2015-07-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for dynamic mechanism of nitrate/nitrite antiport by NarK
Nat Commun, 6, 2015
4U4Y
DownloadVisualize
BU of 4u4y by Molmil
Crystal structure of Pactamycin bound to the yeast 80S ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
Deposit date:2014-07-24
Release date:2014-10-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
4U72
DownloadVisualize
BU of 4u72 by Molmil
Crystal structure of 4-phenylimidazole bound form of human indoleamine 2,3-dioxygenase (A260G mutant)
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-PHENYL-1H-IMIDAZOLE, Indoleamine 2,3-dioxygenase 1, ...
Authors:Sugimoto, H, Horitani, M, Kometani, E, Shiro, Y.
Deposit date:2014-07-30
Release date:2015-09-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformation and Mobility of Active Site Loop is Critical for Substrate Binding and Inhibition in Human Indoleamine 2,3-Dioxygenase
to be published
4U27
DownloadVisualize
BU of 4u27 by Molmil
Crystal structure of the E. coli ribosome bound to flopristin and linopristin.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Noeske, J, Huang, J, Olivier, N.B, Giacobbe, R.A, Zambrowski, M, Cate, J.H.D.
Deposit date:2014-07-16
Release date:2014-07-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Synergy of streptogramin antibiotics occurs independently of their effects on translation.
Antimicrob.Agents Chemother., 58, 2014
4U51
DownloadVisualize
BU of 4u51 by Molmil
Crystal structure of Narciclasine bound to the yeast 80S ribosome
Descriptor: (2S,3R,4S,4aR)-2,3,4,7-tetrahydroxy-3,4,4a,5-tetrahydro[1,3]dioxolo[4,5-j]phenanthridin-6(2H)-one, 18S ribosomal RNA, 25S ribosomal RNA, ...
Authors:Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
Deposit date:2014-07-24
Release date:2014-10-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
4UAH
DownloadVisualize
BU of 4uah by Molmil
Structure of the Ssl1 laccase mutant H99N with depleted type-2 copper ion
Descriptor: COPPER (II) ION, Copper oxidase, GLYCEROL
Authors:Gunne, M, Hoeppner, A, Jaeger, V.D, Urlacher, V.B.
Deposit date:2014-08-09
Release date:2015-08-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structure of the Ssl1 laccase mutant H99N with depleted type-2 copper ion
To Be Published
4U3Z
DownloadVisualize
BU of 4u3z by Molmil
APO MAP4K4 T181E Phosphomimetic Mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase kinase kinase kinase 4, SODIUM ION
Authors:Harris, S.F, Wu, P, Coons, M.
Deposit date:2014-07-23
Release date:2016-01-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Plasticity and Kinase Activation in a Cohort of MAP4K4 Structures
to be published
8R56
DownloadVisualize
BU of 8r56 by Molmil
Crystal structure of GH31 family Sulfoquinovosidase BmSQase in covalent complex with SQ-aziridine (SQZ)
Descriptor: Glycosyl hydrolase, family 31, POTASSIUM ION, ...
Authors:Sharma, M, Davies, G.J.
Deposit date:2023-11-16
Release date:2024-05-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Detection of Sulfoquinovosidase Activity in Cell Lysates Using Activity-Based Probes.
Angew.Chem.Int.Ed.Engl., 63, 2024
4UBH
DownloadVisualize
BU of 4ubh by Molmil
Resting state of rat cysteine dioxygenase Y157F variant
Descriptor: CHLORIDE ION, Cysteine dioxygenase type 1, FE (II) ION, ...
Authors:Tchesnokov, E.P, Fellner, M, Jameson, G.N.L, Wilbanks, S.M.
Deposit date:2014-08-13
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of cysteine dioxygenase mutant
To be published
4UBO
DownloadVisualize
BU of 4ubo by Molmil
KINETIC CRYSTALLOGRAPHY OF ALPHA_E7-CARBOXYLESTERSE FROM LUCILLA CUPRINA - ABSORBED X-RAY DOSE 3.70 MGy TEMP 150K
Descriptor: DIETHYL HYDROGEN PHOSPHATE, E3
Authors:Jackson, C.J, Carr, P.D, Weik, M, Huber, T, Meirelles, T, Correy, G.
Deposit date:2014-08-13
Release date:2015-08-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Mapping the Accessible Conformational Landscape of an Insect Carboxylesterase Using Conformational Ensemble Analysis and Kinetic Crystallography
Structure, 24, 2016
8R74
DownloadVisualize
BU of 8r74 by Molmil
Galectin-1 in complex with thiogalactoside derivative
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-4-[4-(2-oxidanyl-1,3-thiazol-4-yl)-1,2,3-triazol-1-yl]oxane-3,5-diol, Galectin-1
Authors:Hakansson, M, Diehl, C, Peterson, K, Zetterberg, F, Nilsson, U.
Deposit date:2023-11-23
Release date:2024-06-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Discovery of the Selective and Orally Available Galectin-1 Inhibitor GB1908 as a Potential Treatment for Lung Cancer.
J.Med.Chem., 67, 2024
4U40
DownloadVisualize
BU of 4u40 by Molmil
Mitogen-activated protein kinase kinase kinase kinase 4 (MAP4K4) Bound to AMPPNP
Descriptor: MAGNESIUM ION, Mitogen-activated protein kinase kinase kinase kinase 4, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Harris, S.F, Wu, P, Coons, M.
Deposit date:2014-07-23
Release date:2016-01-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Plasticity and Kinase Activation in a Cohort of MAP4K4 Structures
to be published
4U42
DownloadVisualize
BU of 4u42 by Molmil
MAP4K4 T181E Mutant Bound to inhibitor compound 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-[(3S)-3-(4-methyl-1H-pyrazol-3-yl)piperidin-1-yl]pyrido[3,2-d]pyrimidin-4-amine, MAGNESIUM ION, ...
Authors:Harris, S.F, Wu, P, Coons, M.
Deposit date:2014-07-23
Release date:2016-01-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Structural Plasticity and Kinase Activation in a Cohort of MAP4K4 Structures
to be published
8RS9
DownloadVisualize
BU of 8rs9 by Molmil
p97 (VCP) double mutant - F266A F539A
Descriptor: Transitional endoplasmic reticulum ATPase
Authors:Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
Deposit date:2024-01-24
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:p97 (VCP) double mutant - F266A F539A
To Be Published

227111

건을2024-11-06부터공개중

PDB statisticsPDBj update infoContact PDBjnumon