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PDB: 51586 results

7COQ
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BU of 7coq by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to AMP-PNP: A3(De)3_(ANP)1cat
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2020-08-05
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:De Novo Design of Allosteric Control into Rotary Motor V1-ATPase by Restoring Lost Function
To Be Published
7CRN
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BU of 7crn by Molmil
The Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization
Descriptor: Non-ribosomal peptide synthetase 4
Authors:Yu, J.H, Song, J, Chi, C.B, Ma, M.
Deposit date:2020-08-14
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization in Skyllamycin Biosynthesis
Acs Catalysis, 11, 2021
7CUX
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BU of 7cux by Molmil
Crystal structure of human Schlafen 5 N'-terminal domain (SLFN5-N) involved in ssRNA cleaving and DNA binding
Descriptor: Schlafen family member 5, ZINC ION
Authors:Yang, J.Y, Luo, M, Ou, J.Y, Wang, Z.W, Gao, S.
Deposit date:2020-08-25
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.29477072 Å)
Cite:Crystal structure of human Schlafen 5 N'-terminal domain (SLFN5-N) involved in ssRNA cleaving and DNA binding
To Be Published
7CUJ
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BU of 7cuj by Molmil
Crystal structure of fission yeast Ccq1 and Tpz1
Descriptor: Coiled-coil quantitatively-enriched protein 1, Protection of telomeres protein tpz1
Authors:Sun, H, Wu, Z, Wu, J, Lei, M.
Deposit date:2020-08-23
Release date:2021-08-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.
Plos Genet., 18, 2022
7CUI
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BU of 7cui by Molmil
Crystal structure of fission yeast Pot1 and Tpz1
Descriptor: Protection of telomeres protein 1, Protection of telomeres protein tpz1, SULFATE ION
Authors:Sun, H, Wu, Z, Wu, J, Lei, M.
Deposit date:2020-08-23
Release date:2021-08-25
Last modified:2022-09-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.
Plos Genet., 18, 2022
7CUH
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BU of 7cuh by Molmil
Crystal structure of fission yeast Pot1 and ssDNA
Descriptor: Protection of telomeres protein 1, Telomere single-strand DNA
Authors:Sun, H, Wu, Z, Wu, J, Lei, M.
Deposit date:2020-08-23
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.
Plos Genet., 18, 2022
7CX0
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BU of 7cx0 by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
Descriptor: CARBIDOPA, Decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
to be published
7CWX
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BU of 7cwx by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis
Descriptor: DI(HYDROXYETHYL)ETHER, Decarboxylase, GLYCEROL
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis
to be published
7CWY
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BU of 7cwy by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP
Descriptor: Decarboxylase
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP
to be published
7CX1
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BU of 7cx1 by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor methyl-tyrosine
Descriptor: 4-[(2R)-2-(methylamino)propyl]phenol, Decarboxylase
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor methyl-tyrosine
to be published
7CWZ
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BU of 7cwz by Molmil
Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis K392A mutant in complex with the cofactor PLP and L-dopa
Descriptor: Decarboxylase, L-DOPAMINE, MAGNESIUM ION, ...
Authors:Yu, X, Gong, M, Huang, J, Liu, W, Chen, C, Guo, R.
Deposit date:2020-09-01
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis K392A mutant in complex with the cofactor PLP and L-dopa
to be published
7CJS
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BU of 7cjs by Molmil
structure of aquaporin
Descriptor: Aquaporin NIP2-1, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
Authors:Saitoh, Y, Ma, J.F, Suga, M.
Deposit date:2020-07-13
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for high selectivity of a rice silicon channel Lsi1.
Nat Commun, 12, 2021
7CPJ
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BU of 7cpj by Molmil
ycbZ-stalled 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Yokoyama, T, Shirouzu, M, Ito, T.
Deposit date:2020-08-07
Release date:2021-12-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The landscape of translational stall sites in bacteria revealed by monosome and disome profiling.
Rna, 28, 2022
7CLK
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BU of 7clk by Molmil
Mycobacterium tuberculosis enolase in complex with alternate 2-phosphoglycerate
Descriptor: 1,2-ETHANEDIOL, 2-PHOSPHOGLYCERIC ACID, ACETATE ION, ...
Authors:Ahmad, M, Jha, B, Tiwari, S, Pal, R.K, Biswal, B.K.
Deposit date:2020-07-21
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural snapshots of Mycobacterium tuberculosis enolase reveal dual mode of 2PG binding and its implication in enzyme catalysis.
Iucrj, 10, 2023
7CJ1
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BU of 7cj1 by Molmil
The crystal structure of FXIa serine protease domain in complex with benzamidine
Descriptor: BENZAMIDINE, Coagulation factor XI
Authors:Jiang, L, Huang, M.
Deposit date:2020-07-09
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of FXIa serine protease domain in complex with benzamidine.
To Be Published
7CK5
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BU of 7ck5 by Molmil
Solution structure of 28 amino acid polypeptide (354-381) in Plantago asiatica mosaic virus replicase bound to SDS micelle
Descriptor: PlAMV replicase peptide from RNA-dependent RNA polymerase
Authors:Komatsu, K, Sasaki, N, Yoshida, T, Suzuki, K, Masujima, Y, Hashimoto, M, Watanabe, S, Tochio, N, Kigawa, T, Yamaji, Y, Oshima, K, Namba, S, Nelson, R, Arie, T.
Deposit date:2020-07-15
Release date:2021-07-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Identification of a Proline-Kinked Amphipathic alpha-Helix Downstream from the Methyltransferase Domain of a Potexvirus Replicase and Its Role in Virus Replication and Perinuclear Complex Formation.
J.Virol., 95, 2021
7CU6
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BU of 7cu6 by Molmil
lasso peptide C24 mutant - A11V2C
Descriptor: lasso peptide C24_A11V2C
Authors:Ma, M, Liu, X.H.
Deposit date:2020-08-21
Release date:2021-08-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rational generation of lasso peptides based on biosynthetic gene mutations and site-selective chemical modifications.
Chem Sci, 12, 2021
7CJW
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BU of 7cjw by Molmil
Solution structure of monomeric superoxide dismutase 1 with an additional mutation H46W in a crowded environment
Descriptor: Monomeric Human Cu,Zn Superoxide dismutase
Authors:Iwakawa, N, Morimoto, D, Walinda, E, Danielsson, J, Shirakawa, M, Sugase, K.
Deposit date:2020-07-14
Release date:2021-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Transient Diffusive Interactions with a Protein Crowder Affect Aggregation Processes of Superoxide Dismutase 1 beta-Barrel.
J.Phys.Chem.B, 125, 2021
7CY6
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BU of 7cy6 by Molmil
Crystal Structure of CMD1 in complex with 5mC-DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), FE (II) ION, ...
Authors:Li, W, Zhang, T, Sun, M, Ding, J.
Deposit date:2020-09-03
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CY7
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BU of 7cy7 by Molmil
Crystal Structure of CMD1 in complex with DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*GP*CP*GP*CP*GP*GP*GP*A)-3'), FE (II) ION, ...
Authors:Li, W, Zhang, T, Sun, M, Ding, J.
Deposit date:2020-09-03
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CYQ
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BU of 7cyq by Molmil
Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Helicase, MAGNESIUM ION, ...
Authors:Yan, L, Ge, J, Zheng, L, Zhang, Y, Gao, Y, Wang, T, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
Deposit date:2020-09-04
Release date:2020-12-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Cryo-EM Structure of an Extended SARS-CoV-2 Replication and Transcription Complex Reveals an Intermediate State in Cap Synthesis.
Cell, 184, 2021
7D0F
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BU of 7d0f by Molmil
cryo-EM structure of a pre-catalytic group II intron RNP
Descriptor: Group II intron-encoded protein LtrA, RNA (738-MER)
Authors:Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
Deposit date:2020-09-10
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
7CY5
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BU of 7cy5 by Molmil
Crystal Structure of CMD1 in complex with vitamin C
Descriptor: ASCORBIC ACID, CITRIC ACID, FE (III) ION, ...
Authors:Li, W, Zhang, T, Sun, M, Ding, J.
Deposit date:2020-09-03
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CXN
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BU of 7cxn by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
Descriptor: Helicase, Non-structural protein 7, Non-structural protein 8, ...
Authors:Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
Deposit date:2020-09-02
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
7D0G
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BU of 7d0g by Molmil
Cryo-EM structure of a pre-catalytic group II intron
Descriptor: Group II intron-encoded protein LtrA, RNA (714-MER)
Authors:Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
Deposit date:2020-09-10
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020

224004

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