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PDB: 51689 results

5F08
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BU of 5f08 by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium tuberculosis in complex with compound 14 at 1.92A resolution
Descriptor: HTH-type transcriptional regulator EthR, ~{tert}-butyl ~{N}-methyl-~{N}-[[4-[4-(3-oxidanylidene-3-pyrrolidin-1-yl-propyl)piperidin-1-yl]phenyl]methyl]carbamate
Authors:Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2015-11-27
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016
6ARP
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BU of 6arp by Molmil
Structure of a mutant Cetuximab Fab fragment
Descriptor: Cetuximab mutant Fab heavy chain,Immunoglobulin gamma-1 heavy chain, Cetuximab mutant light chain,Uncharacterized protein, GLYCEROL, ...
Authors:Christie, M, Christ, D.
Deposit date:2017-08-23
Release date:2018-08-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a mutant Cetuximab Fab fragment
To Be Published
2M72
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BU of 2m72 by Molmil
Solution structure of uncharacterized thioredoxin-like protein PG_2175 from Porphyromonas gingivalis
Descriptor: Uncharacterized thioredoxin-like protein
Authors:Harris, R, Ahmed, M, Attonito, J, Bonanno, J.B, Chamala, S, Chowdhury, S, Evans, B, Fiser, A, Glenn, A.S, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Love, J.D, Seidel, R.D, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-16
Release date:2013-05-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of uncharacterized thioredoxin-like protein PG_2175 from Porphyromonas gingivalis
To be Published
6E1L
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BU of 6e1l by Molmil
GRN3Ala
Descriptor: Granulin
Authors:Dastpeyman, M, Bansal, P, Wilson, D, Sotillo, J, Brindley, P, Loukas, A, Smout, M, Daly, N.
Deposit date:2018-07-10
Release date:2019-02-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Variants of a Liver Fluke Derived Granulin Peptide Potently Stimulate Wound Healing.
J. Med. Chem., 61, 2018
6AU3
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BU of 6au3 by Molmil
Crystal structure of SETDB1 Tudor domain with aryl triazole fragments
Descriptor: 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, N-{[2-(3,5-dimethyl-4H-1,2,4-triazol-4-yl)phenyl]methyl}acetamide, ...
Authors:MADER, P, Mendoza-Sanchez, R, IQBAL, A, DONG, A, DOBROVETSKY, E, CORLESS, V.B, LIEW, S.K, TEMPEL, W, SMIL, D, DELA SENA, C.C, KENNEDY, S, DIAZ, D, HOLOWNIA, A, VEDADI, M, BROWN, P.J, SANTHAKUMAR, V, Bountra, C, Edwards, A.M, YUDIN, A.K, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2017-08-30
Release date:2017-09-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of SETDB1 Tudor domain with aryl triazole fragments
to be published
6AVJ
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BU of 6avj by Molmil
Crystal structure of human Mitochondrial inner NEET protein (MiNT)/CISD3
Descriptor: CDGSH iron-sulfur domain-containing protein 3, mitochondrial, FE2/S2 (INORGANIC) CLUSTER
Authors:Lipper, C.H, Karmi, O, Sohn, Y.S, Darash-Yahana, M, Lammert, H, Song, L, Liu, A, Mittler, R, Nechushtai, R, Onuchic, J.N, Jennings, P.A.
Deposit date:2017-09-02
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the human monomeric NEET protein MiNT and its role in regulating iron and reactive oxygen species in cancer cells.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6AWE
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BU of 6awe by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 2-fluoro-6-(2-pyridin-2-ylethylamino)benzonitrile
Descriptor: 2-fluoro-6-{[2-(pyridin-2-yl)ethyl]amino}benzonitrile, DIMETHYL SULFOXIDE, Purine nucleoside phosphorylase
Authors:Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
Deposit date:2017-09-05
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 2-fluoro-6-(2-pyridin-2-ylethylamino)benzonitrile
To Be Published
2MLS
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BU of 2mls by Molmil
Membrane Bilayer complex with Matrix Metalloproteinase-12 at its Beta-face
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Koppisetti, R.K, Fulcher, Y.G, Prior, S.H, Lenoir, M, Overduin, M, Van Doren, S.R.
Deposit date:2014-03-04
Release date:2014-12-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Ambidextrous binding of cell and membrane bilayers by soluble matrix metalloproteinase-12.
Nat Commun, 5, 2014
2M56
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BU of 2m56 by Molmil
The structure of the complex of cytochrome P450cam and its electron donor putidaredoxin determined by paramagnetic NMR spectroscopy
Descriptor: CAMPHOR, Camphor 5-monooxygenase, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Hiruma, Y, Hass, M.A.S, Ubbink, M.
Deposit date:2013-02-14
Release date:2013-08-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of the cytochrome p450cam-putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography.
J.Mol.Biol., 425, 2013
2M6T
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BU of 2m6t by Molmil
NMR solution structure ensemble of 3-4D mutant domain 11 IGF2R
Descriptor: Insulin-like growth factor 2 receptor variant
Authors:Strickland, M, Williams, C, Richards, E, Minnall, L, Crump, M.P, Frago, S, Hughes, J, Garner, L, Hoppe, H, Rezgui, D, Zaccheo, O.J, Prince, S.N, Hassan, A.B, Whittaker, S.
Deposit date:2013-04-09
Release date:2014-10-15
Last modified:2016-06-01
Method:SOLUTION NMR
Cite:Functional evolution of IGF2:IGF2R domain 11 binding generates novel structural interactions and a specific IGF2 antagonist.
Proc.Natl.Acad.Sci.USA, 113, 2016
1IL6
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BU of 1il6 by Molmil
HUMAN INTERLEUKIN-6, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: INTERLEUKIN-6
Authors:Xu, G.Y, Yu, H.A, Hong, J, Stahl, M, Mcdonagh, T, Kay, L.E, Cumming, D.A.
Deposit date:1997-01-31
Release date:1998-02-04
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of recombinant human interleukin-6.
J.Mol.Biol., 268, 1997
5EZG
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BU of 5ezg by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 22 at 1.84A resolution
Descriptor: HTH-type transcriptional regulator EthR, SULFATE ION, ~{N}-[(1-pyrimidin-2-ylpiperidin-4-yl)methyl]pyrrolidine-1-carboxamide
Authors:Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2015-11-26
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016
6AOD
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BU of 6aod by Molmil
FXIa antibody complex
Descriptor: COBALT (II) ION, Coagulation factor XI, FXIa Antibody FAB Heavy Chain, ...
Authors:Lolicato, M, Minor, D.L.
Deposit date:2017-08-15
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Activity and Specificity of an Anticoagulant Anti-FXIa Monoclonal Antibody and a Reversal Agent.
Structure, 26, 2018
3M0O
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BU of 3m0o by Molmil
Crystal Structure of the Lys265Met mutant of monomeric sarcosine oxidase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase
Authors:Mathews, F.S, Chen, Z.-W, Jorns, M.S.
Deposit date:2010-03-03
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural characterization of mutations at the oxygen activation site in monomeric sarcosine oxidase .
Biochemistry, 49, 2010
3M55
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BU of 3m55 by Molmil
SET7/9 Y305F in complex with TAF10-K189me1 peptide and AdoHcy
Descriptor: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10 peptide
Authors:Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
Deposit date:2010-03-12
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
1S01
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BU of 1s01 by Molmil
LARGE INCREASES IN GENERAL STABILITY FOR SUBTILISIN BPN(PRIME) THROUGH INCREMENTAL CHANGES IN THE FREE ENERGY OF UNFOLDING
Descriptor: CALCIUM ION, ISOPROPYL ALCOHOL, Subtilisin BPN'
Authors:Whitlow, M, Howard, A.J, Wood, J.F.
Deposit date:1989-08-21
Release date:1990-10-15
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Large increases in general stability for subtilisin BPN' through incremental changes in the free energy of unfolding.
Biochemistry, 28, 1989
2MDX
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BU of 2mdx by Molmil
Solution structure of the human wild type FAPP1-PH domain
Descriptor: Pleckstrin homology domain-containing family A member 3
Authors:Lenoir, M, Overduin, M.
Deposit date:2013-09-19
Release date:2014-09-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the human wild type FAPP1-PH domain
To be Published
2MCY
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BU of 2mcy by Molmil
CR1 Sushi domains 2 and 3
Descriptor: Complement receptor type 1
Authors:Park, H.J, Guariento, M.J, Maciejewski, M, Hauart, R, Tham, W, Cowman, A.F, Schmidt, C.Q, Martens, H, Liszewski, K.M, Hourcade, D, Barlow, P.N, Atkinson, J.P.
Deposit date:2013-08-27
Release date:2013-11-13
Last modified:2014-01-22
Method:SOLUTION NMR
Cite:Using Mutagenesis and Structural Biology to Map the Binding Site for the Plasmodium falciparum Merozoite Protein PfRh4 on the Human Immune Adherence Receptor.
J.Biol.Chem., 289, 2014
6B65
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BU of 6b65 by Molmil
IMPase (AF2372) R92Q/K164E
Descriptor: DI(HYDROXYETHYL)ETHER, Fructose-1,6-bisphosphatase/inositol-1-monophosphatase, ISOPROPYL ALCOHOL, ...
Authors:Goldstein, R.I, Roberts, M.
Deposit date:2017-10-01
Release date:2018-10-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Osmolyte binding capacity of a dual action IMPase/FBPase (AF2372)
To Be Published
3M53
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BU of 3m53 by Molmil
SET7/9 in complex with TAF10 peptide and AdoHcy
Descriptor: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10 peptide
Authors:Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
Deposit date:2010-03-12
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
2MF1
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BU of 2mf1 by Molmil
Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer R of RsmZ(1-72)/RsmE(dimer) 1to3 complex
Descriptor: Carbon storage regulator homolog, RNA_(72-MER)
Authors:Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T.
Deposit date:2013-10-02
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Nature, 509, 2014
5F0H
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BU of 5f0h by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 28 at 1.99A resolution
Descriptor: 3-[1-(4-cyanophenyl)piperidin-4-yl]-~{N}-[(4-piperidin-1-ylphenyl)methyl]propanamide, HTH-type transcriptional regulator EthR
Authors:Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2015-11-27
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016
6B7W
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BU of 6b7w by Molmil
Structure of hen egg-white lysozyme pre-treated with high pressure (600 MPa) under isobaric condition
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Morais, M.A.B, Nascimento, A.F.Z, Tominaga, C.Y, Cristianini, M, Tribst, A.A.L, Murakami, M.T.
Deposit date:2017-10-05
Release date:2018-07-25
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:How high pressure pre-treatments affect the function and structure of hen egg-white lysozyme
Innov Food Sci Emerg Technol, 47, 2018
2MLR
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BU of 2mlr by Molmil
Membrane Bilayer complex with Matrix Metalloproteinase-12 at its Alpha-face
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Koppisetti, R.K, Fulcher, Y.G, Prior, S.H, Lenoir, M, Overduin, M, Van Doren, S.R.
Deposit date:2014-03-04
Release date:2014-12-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Ambidextrous binding of cell and membrane bilayers by soluble matrix metalloproteinase-12.
Nat Commun, 5, 2014
5F1J
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BU of 5f1j by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with compound 1 at 1.63A resolution
Descriptor: 3-cyclopentyl-1-pyrrolidin-1-yl-propan-1-one, HTH-type transcriptional regulator EthR
Authors:Surade, S, Blaszczyk, M, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2015-11-30
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters.
Org.Biomol.Chem., 14, 2016

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