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PDB: 51586 件

4YM6
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Crystal structure of the human nucleosome containing 6-4PP (outside)
分子名称: 145-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Osakabe, A, Tachiwana, H, Kagawa, W, Horikoshi, N, Matsumoto, S, Hasegawa, M, Matsumoto, N, Toga, T, Yamamoto, J, Hanaoka, F, Thoma, N.H, Sugasawa, K, Iwai, S, Kurumizaka, H.
登録日2015-03-06
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.514 Å)
主引用文献Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome
Sci Rep, 5, 2015
5GX1
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Luciferin-regenerating enzyme collected with serial synchrotron rotational crystallography with accumulated dose of 1.1 MGy (1st measurement)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Luciferin regenerating enzyme, ...
著者Hasegawa, K, Yamashita, K, Murai, T, Nuemket, N, Hirata, K, Ueno, G, Ago, H, Nakatsu, T, Kumasaka, T, Yamamoto, M.
登録日2016-09-15
公開日2017-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography
J Synchrotron Radiat, 24, 2017
4U06
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Structure of Leptospira interrogans LRR protein LIC10831
分子名称: CHLORIDE ION, LIC10831, ZINC ION
著者Shepard, W, Saul, F.A, Haouz, A, Picardeau, M.
登録日2014-07-11
公開日2015-06-03
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of a novel subfamily of leucine-rich repeat proteins from the human pathogen Leptospira interrogans.
Acta Crystallogr.,Sect.D, 71, 2015
4U08
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Structure of Leptospira interrogans LRR protein LIC11098
分子名称: CALCIUM ION, LIC11098, SULFATE ION, ...
著者Shepard, W, Saul, F.A, Haouz, A, Picardeau, M.
登録日2014-07-11
公開日2015-06-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural characterization of a novel subfamily of leucine-rich repeat proteins from the human pathogen Leptospira interrogans.
Acta Crystallogr.,Sect.D, 71, 2015
4YOV
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Crystal structure of a trimeric exonuclease PhoExo I from Pyrococcus horikoshii OT3 in complex with poly-dA
分子名称: 3-5 exonuclease PhoExo I, 5'-D(*AP*AP*AP*AP*AP*AP*A)-3'
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2015-03-12
公開日2015-07-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I
Nucleic Acids Res., 43, 2015
5GXO
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Discovery of a compound that activates SIRT3 to deacetylate Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial
著者Lu, J, Li, J, Wu, M, Wang, J, Xia, Q.
登録日2016-09-19
公開日2017-08-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A small molecule activator of SIRT3 promotes deacetylation and activation of manganese superoxide dismutase.
Free Radic. Biol. Med., 112, 2017
9EY5
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Crystal structure of human tyrosinase-related protein 1 (TYRP1) in complex with (S)-2,4-dihydroxyphenylalanine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-L-tyrosine, ...
著者Ng, Y.M, Soler-Lopez, M.
登録日2024-04-09
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Interactions of Phenylalanine Derivatives with Human Tyrosinase: Lessons from Experimental and Theoretical tudies.
Chembiochem, 25, 2024
4YMV
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Crystal structure of an amino acid ABC transporter with ATPs
分子名称: ABC-type amino acid transport system, permease component, ABC-type polar amino acid transport system, ...
著者Ge, J, Yu, J, Yang, M.
登録日2015-03-07
公開日2015-04-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
4TUJ
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Crystal structure of monoclonal antibody against neuroblastoma associated antigen.
分子名称: Heavy chain of monoclonal antibody against neuroblastoma associated antigen, Light chain of monoclonal antibody against neuroblastoma associated antigen, peptide1
著者Grudnik, P, Golik, P, Horwacik, I, Zdzalik, M, Rokita, H, Dubin, G.
登録日2014-06-24
公開日2015-07-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural Basis of GD2 Ganglioside and Mimetic Peptide Recognition by 14G2a Antibody.
Mol.Cell Proteomics, 14, 2015
7YDS
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The structure of the bispecific antibody targeted PD-L1 and 4-1BB
分子名称: Anti-PDL1-VH-CH1, Anti-PDL1-VL-CL, Programmed cell death 1 ligand 1
著者Gao, Y, Zhu, M, Liu, W.T, Cheng, L.S, Zhu, Z.L, Niu, L.W.
登録日2022-07-04
公開日2023-07-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A bispecific antibody targeted PD-L1 and 4-1BB induces a potent antitumor immune activity in colorectal cancer without systemic toxicity
To Be Published
4YNI
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BU of 4yni by Molmil
Iron free succinate bound rat cysteine dioxygenase
分子名称: Cysteine dioxygenase type 1, SODIUM ION, SUCCINIC ACID
著者Fellner, M, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M.
登録日2015-03-10
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.404 Å)
主引用文献Iron free succinate bound rat cysteine dioxygenase
To be published
4TVP
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Crystal Structure of the HIV-1 BG505 SOSIP.664 Env Trimer Ectodomain, Comprising Atomic-Level Definition of Pre-Fusion gp120 and gp41, in Complex with Human Antibodies PGT122 and 35O22
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Heavy chain, ...
著者Pancera, M, Zhou, T, Kwong, P.D.
登録日2014-06-27
公開日2014-10-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure and immune recognition of trimeric pre-fusion HIV-1 Env.
Nature, 514, 2014
4YQW
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Mutant Human DNA Polymerase Eta Q38A/R61A Inserting dCTP Opposite Template G
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
著者Su, Y, Patra, A, Harp, J.M, Egli, M, Guengerich, F.P.
登録日2015-03-13
公開日2015-05-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.064 Å)
主引用文献Roles of Residues Arg-61 and Gln-38 of Human DNA Polymerase eta in Bypass of Deoxyguanosine and 7,8-Dihydro-8-oxo-2'-deoxyguanosine.
J.Biol.Chem., 290, 2015
7YHN
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ANTI-TUMOR AGENT Y48 IN COMPLEX WITH TUBULIN
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-methyl-3-[(4-methylphenyl)sulfonylamino]-~{N}-[(6-methylpyridin-3-yl)methyl]benzamide, GUANOSINE-5'-DIPHOSPHATE, ...
著者Du, T, Ji, M, Hou, Z, Lin, S, Zhang, J, Wu, D, Zhang, K, Lu, D, Xu, H, Chen, X.
登録日2022-07-14
公開日2023-07-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Optimization of Benzamide Derivatives as Potent and Orally Active Tubulin Inhibitors Targeting the Colchicine Binding Site.
J.Med.Chem., 65, 2022
4YSF
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BU of 4ysf by Molmil
Resting state of rat cysteine dioxygenase H155N variant
分子名称: Cysteine dioxygenase type 1, FE (II) ION
著者Fellner, M, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M.
登録日2015-03-17
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Resting state of rat cysteine dioxygenase H155N variant
To be published
4YOY
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BU of 4yoy by Molmil
Crystal structure of a trimeric exonuclease PhoExo I from Pyrococcus horikoshii OT3 in complex with poly-dT and Mg2+ ion
分子名称: 3-5 exonuclease PhoExo I, 5'-D(*TP*TP*TP*TP*TP*TP*T)-3', MAGNESIUM ION
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2015-03-12
公開日2015-07-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I
Nucleic Acids Res., 43, 2015
9EY6
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Crystal structure of human tyrosinase-related protein 1 (TYRP1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 5,6-dihydroxyindole-2-carboxylic acid oxidase, ...
著者Ng, Y.M, Soler-Lopez, M.
登録日2024-04-09
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.228 Å)
主引用文献Interactions of Phenylalanine Derivatives with Human Tyrosinase: Lessons from Experimental and Theoretical tudies.
Chembiochem, 25, 2024
5H34
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Crystal structure of the C-terminal domain of methionyl-tRNA synthetase (MetRS-C) in Nanoarchaeum equitans
分子名称: Methionine-tRNA ligase
著者Suzuki, H, Kaneko, A, Yamamoto, T, Nambo, M, Umehara, T, Yoshida, H, Park, S.Y, Tamura, K.
登録日2016-10-20
公開日2017-06-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.748 Å)
主引用文献Binding Properties of Split tRNA to the C-terminal Domain of Methionyl-tRNA Synthetase of Nanoarchaeum equitans.
J. Mol. Evol., 84, 2017
5H3O
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Structure of a eukaryotic cyclic nucleotide-gated channel
分子名称: CYCLIC GUANOSINE MONOPHOSPHATE, Cyclic nucleotide-gated cation channel, SODIUM ION
著者Li, M, Zhou, X, Wang, S, Michailidis, I, Gong, Y, Su, D, Li, H, Li, X, Yang, J.
登録日2016-10-26
公開日2017-01-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of a eukaryotic cyclic-nucleotide-gated channel.
Nature, 542, 2017
2KVJ
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NMR and MD solution structure of a Gamma-Methylated PNA duplex
分子名称: Gamma-Modified Peptide Nucleic Acid
著者He, W, Crawford, M.J, Rapireddy, S, Madrid, M, Gil, R.R, Ly, D.H, Achim, C.
登録日2010-03-15
公開日2010-05-12
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献The structure of a gamma-modified peptide nucleic acid duplex.
Mol Biosyst, 6, 2010
5H4Z
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Crystal structure of S202G mutant of human SYT-5 C2A domain
分子名称: CALCIUM ION, CHLORIDE ION, Synaptotagmin-5
著者Qiu, X, Ge, J, Yan, X, Gao, Y, Teng, M, Niu, L.
登録日2016-11-02
公開日2016-11-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural analysis of Ca(2+)-binding pocket of synaptotagmin 5 C2A domain
Int. J. Biol. Macromol., 95, 2017
9EY7
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BU of 9ey7 by Molmil
Crystal structure of human tyrosinase-related protein 1 (TYRP1) in complex with (R)-2,4-dihydroxyphenylalanine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-L-tyrosine, ...
著者Ng, Y.M, Soler-Lopez, M.
登録日2024-04-09
公開日2024-05-22
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Interactions of Phenylalanine Derivatives with Human Tyrosinase: Lessons from Experimental and Theoretical tudies.
Chembiochem, 25, 2024
4U09
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Structure of Leptospira interrogans LRR protein LIC12759
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Shepard, W, Saul, F.A, Haouz, A, Picardeau, M.
登録日2014-07-11
公開日2015-06-03
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural characterization of a novel subfamily of leucine-rich repeat proteins from the human pathogen Leptospira interrogans.
Acta Crystallogr.,Sect.D, 71, 2015
5GUE
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Crystal structure of CotB2 (GGSPP/Mg2+-Bound Form) from Streptomyces melanosporofaciens
分子名称: Cyclooctat-9-en-7-ol synthase, MAGNESIUM ION, phosphonooxy-[(10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]sulfanyl-phosphinic acid
著者Tomita, T, Kim, S.-Y, Ozaki, T, Yoshida, A, Kuzuyama, T, Nishiyama, M.
登録日2016-08-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Insights into the CotB2-Catalyzed Cyclization of Geranylgeranyl Diphosphate to the Diterpene Cyclooctat-9-en-7-ol
ACS Chem. Biol., 12, 2017
4YA0
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Yeast 20S proteasome beta2-H116E mutant in complex with Ac-PAE-ep
分子名称: Ac-PAE-ep, CHLORIDE ION, MAGNESIUM ION, ...
著者Huber, E.M, Groll, M.
登録日2015-02-17
公開日2015-06-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J.Am.Chem.Soc., 137, 2015

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件を2024-08-21に公開中

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