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PDB: 52230 件

3CZ4
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Native AphA class B acid phosphatase/phosphotransferase from E. coli
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Leone, R, Cappelletti, E, Benvenuti, M, Lentini, G, Thaller, M.C, Mangani, S.
登録日2008-04-28
公開日2008-11-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into the catalytic mechanism of the bacterial class B phosphatase AphA belonging to the DDDD superfamily of phosphohydrolases.
J.Mol.Biol., 384, 2008
4S17
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The crystal structure of glutamine synthetase from Bifidobacterium adolescentis ATCC 15703
分子名称: ACETATE ION, Glutamine synthetase, MAGNESIUM ION
著者Cuff, M, Tan, K, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-01-08
公開日2015-01-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of glutamine synthetase from Bifidobacterium adolescentis ATCC 15703
To be Published
4TKC
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BU of 4tkc by Molmil
Japanese Marasmius oreades lectin complexed with mannose
分子名称: GLYCEROL, Mannose recognizing lectin, alpha-D-mannopyranose, ...
著者Noma, Y, Shimokawa, M, Maeganeku, C, Motoshima, H, Watanabe, K, Minami, Y, Yagi, F.
登録日2014-05-26
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Structure of Japanese Marasmius oreades lectin complexed with mannose.
To Be Published
4TOG
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BU of 4tog by Molmil
1.80A resolution structure of BfrB (C89S, K96C) crystal form 2 from Pseudomonas aeruginosa
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Bacterioferritin, POTASSIUM ION, ...
著者Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
登録日2014-06-05
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
4TPJ
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BU of 4tpj by Molmil
Selectivity mechanism of a bacterial homologue of the human drug peptide transporters PepT1 and PepT2
分子名称: ALA-ALA-ALA, DODECYL-BETA-D-MALTOSIDE, Proton:oligopeptide symporter POT family, ...
著者Guettou, F, Quistgaard, E, Raba, M, Moberg, P, Low, C, Nordlund, P.
登録日2014-06-07
公開日2014-07-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Selectivity mechanism of a bacterial homolog of the human drug-peptide transporters PepT1 and PepT2.
Nat.Struct.Mol.Biol., 21, 2014
4RM2
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Crystal structure of a benzoate coenzyme A ligase with 2-Fluoro benzoic acid
分子名称: 2-fluorobenzoic acid, Benzoate-coenzyme A ligase
著者Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
登録日2014-10-18
公開日2015-09-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RNZ
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BU of 4rnz by Molmil
Structure of Helicobacter pylori Csd3 from the hexagonal crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, NICKEL (II) ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
8TFV
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BU of 8tfv by Molmil
INSECT DEFENSE PEPTIDE
分子名称: PROTEIN (THANATIN)
著者Mandard, N, Sodano, P, Labbe, H, Bonmatin, J.M, Bulet, P, Hetru, C, Ptak, M, Vovelle, F.
登録日1998-11-24
公開日1998-12-02
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Solution structure of thanatin, a potent bactericidal and fungicidal insect peptide, determined from proton two-dimensional nuclear magnetic resonance data.
Eur.J.Biochem., 256, 1998
4RPC
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BU of 4rpc by Molmil
Crystal structure of the putative alpha/beta hydrolase family protein from Desulfitobacterium hafniense
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TETRAETHYLENE GLYCOL, putative alpha/beta hydrolase
著者Filippova, E.V, Wawrzak, Z, Minasov, G, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-10-30
公開日2014-11-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the putative alpha/beta hydrolase family protein from Desulfitobacterium hafniense
To be Published
4RLN
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BU of 4rln by Molmil
Hen egg-white lysozyme solved from serial crystallography at a synchrotron source, data processed with nXDS
分子名称: Lysozyme C
著者Botha, S, Nass, K, Barends, T, Kabsch, W, Latz, B, Dworkowski, F, Foucar, L, Panepucci, E, Wang, M, Shoeman, R, Schlichting, I, Doak, R.B.
登録日2014-10-17
公開日2015-02-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Room-temperature serial crystallography at synchrotron X-ray sources using slowly flowing free-standing high-viscosity microstreams.
Acta Crystallogr.,Sect.D, 71, 2015
4RMN
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BU of 4rmn by Molmil
Crystal structure of a benzoate coenzyme A ligase with 2-Thiophene Carboxylic acid
分子名称: Benzoate-coenzyme A ligase, GLYCEROL, THIOPHENE-2-CARBOXYLIC ACID
著者Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
登録日2014-10-21
公開日2015-09-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
8RHN
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BU of 8rhn by Molmil
Structure of the 55LCC ATPase complex
分子名称: ATPase family gene 2 protein homolog A, ATPase family gene 2 protein homolog B, Cyclin-dependent kinase 2-interacting protein, ...
著者Foglizzo, M, Degtjarik, O, Zeqiraj, E.
登録日2023-12-15
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The SPATA5-SPATA5L1 ATPase complex directs replisome proteostasis to ensure genome integrity.
Cell, 187, 2024
8RV2
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BU of 8rv2 by Molmil
Structure of the formin INF2 bound to the barbed end of F-actin.
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
登録日2024-01-31
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Molecular mechanism of actin filament elongation by formins.
Science, 384, 2024
4S1N
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BU of 4s1n by Molmil
The crystal structure of phosphoribosylglycinamide formyltransferase from Streptococcus pneumoniae TIGR4
分子名称: CHLORIDE ION, Phosphoribosylglycinamide formyltransferase
著者Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-01-14
公開日2015-01-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of phosphoribosylglycinamide formyltransferase from Streptococcus pneumoniae TIGR4
To be Published
8R0J
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BU of 8r0j by Molmil
Crystal structure of the retromer complex VPS29/VPS35 with the ligand bis-1,3-phenyl guanylhydrazone, 2a
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bis-1,3-phenyl guanylhydrazon, Vacuolar protein sorting-associated protein 29, ...
著者Milani, M, Fagnani, E.
登録日2023-10-31
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Stabilization of the retromer complex: Analysis of novel binding sites of bis-1,3-phenyl guanylhydrazone 2a to the VPS29/VPS35 interface.
Comput Struct Biotechnol J, 23, 2024
8RTT
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BU of 8rtt by Molmil
Structure of the formin Cdc12 bound to the barbed end of phalloidin-stabilized F-actin.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
登録日2024-01-29
公開日2024-04-10
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Molecular mechanism of actin filament elongation by formins.
Science, 384, 2024
4S3A
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BU of 4s3a by Molmil
IspG in complex with Intermediate I
分子名称: (3S)-1,3-dihydroxy-4-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}-2-methylbut-2-ylium, carbokation intermediate, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, ...
著者Quitterer, F, Frank, A, Wang, K, Rao, G, O'Dowd, B, Li, J, Guerra, F, Abdel-Azeim, S, Bacher, A, Eppinger, J, Oldfield, E, Groll, M.
登録日2015-01-26
公開日2015-05-06
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Resolution Structures of Discrete Stages on the Reaction Coordinate of the [Fe4S4] Enzyme IspG (GcpE).
J.Mol.Biol., 427, 2015
8R02
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BU of 8r02 by Molmil
Crystal structure of the retromer complex VPS29/VPS35 with the ligand bis-1,3-phenyl guanylhydrazone, 2a
分子名称: Bis-1,3-phenyl guanylhydrazon, Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Milani, M, Fagnani, E.
登録日2023-10-30
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Stabilization of the retromer complex: Analysis of novel binding sites of bis-1,3-phenyl guanylhydrazone 2a to the VPS29/VPS35 interface.
Comput Struct Biotechnol J, 23, 2024
4RUR
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BU of 4rur by Molmil
Yeast 20S proteasome in complex with the alkaloid indolo-phakellin (4)
分子名称: (2E,3aR,14aS)-9-bromo-2-imino-1,2,3,5,6,14a-hexahydro-4H,8H-imidazo[4',5':5,6]pyrrolo[1',2':4,5]pyrazino[1,2-a]indol-8-one, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Beck, P, Lansdell, T.A, Hewlett, N.M, Tepe, J.J, Groll, M.
登録日2014-11-21
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Indolo-Phakellins as beta 5-Specific Noncovalent Proteasome Inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
4TLF
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BU of 4tlf by Molmil
Crystal structure of Thiol dioxygenase from Pseudomonas aeruginosa
分子名称: 3-mercaptopropionate dioxygenase, FE (II) ION
著者Fellner, M, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M.
登録日2014-05-29
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.137 Å)
主引用文献The Cysteine Dioxygenase Homologue from Pseudomonas aeruginosa Is a 3-Mercaptopropionate Dioxygenase.
J.Biol.Chem., 290, 2015
4RYE
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BU of 4rye by Molmil
The crystal structure of D-ALANYL-D-ALANINE CARBOXYPEPTIDASE from Mycobacterium tuberculosis H37Rv
分子名称: D-alanyl-D-alanine carboxypeptidase
著者Cuff, M, Tan, K, Hatzos-Skintges, C, Jedrzejczak, R, Sacchettini, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2014-12-15
公開日2015-01-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献The crystal structure of D-ALANYL-D-ALANINE CARBOXYPEPTIDASE from Mycobacterium tuberculosis H37Rv
To be Published
8RKS
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BU of 8rks by Molmil
Structure of VPS29-VPS35 bound to the LFa motif R21 of Fam21.
分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35, WASH complex subunit 2A
著者Romano-Moreno, M, Astorga-Simon, E.N, Rojas, A.L, Hierro, A.
登録日2023-12-30
公開日2024-04-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Retromer-mediated recruitment of the WASH complex involves discrete interactions between VPS35, VPS29, and FAM21.
Protein Sci., 33, 2024
4TOC
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BU of 4toc by Molmil
2.25A resolution structure of Iron Bound BfrB (Q151L) from Pseudomonas aeruginosa
分子名称: Bacterioferritin, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
登録日2014-06-05
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
4S1L
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Structure of Uranotaenia sapphirina cypovirus (CPV17) polyhedrin at 298 K
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, polyhedrin
著者Ginn, H.M, Messerschmidt, M, Ji, X, Zhang, H, Axford, D, Gildea, R.J, Winter, G, Brewster, A.S, Hattne, J, Wagner, A, Grimes, J.M, Evans, G, Sauter, N.K, Sutton, G, Stuart, D.I.
登録日2015-01-14
公開日2015-03-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献Structure of CPV17 polyhedrin determined by the improved analysis of serial femtosecond crystallographic data.
Nat Commun, 6, 2015
8RU2
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Structure of the F-actin barbed end bound by formin mDia1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
登録日2024-01-29
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Molecular mechanism of actin filament elongation by formins.
Science, 384, 2024

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