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PDB: 51630 件

7WDM
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Fungal immunomodulatory protein FIP-gmi
分子名称: Immunomodulatory protein
著者Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
登録日2021-12-22
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.123 Å)
主引用文献Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties
To Be Published
7WF0
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The 0.83 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with nervonic acid
分子名称: (15E)-TETRACOS-15-ENOIC ACID, Fatty acid-binding protein, heart, ...
著者Sugiyama, S, Kakinouchi, K, Nakano, R, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
登録日2021-12-24
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.83 Å)
主引用文献The 0.83 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with nervonic acid
To Be Published
7WPW
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The 0.97 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with pentadecanoic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
登録日2022-01-24
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献The 0.97 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with pentadecanoic acid
To Be Published
7WQ7
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The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with nonadecanoic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
登録日2022-01-24
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with nonadecanoic acid
To Be Published
6U47
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Coiled-coil Trimer with Glu:Ala:Lys Triad
分子名称: peptide with Glu:Ala:Lys triad
著者Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
登録日2019-08-23
公開日2020-04-29
最終更新日2020-05-20
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
7YJJ
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Human Cytosolic 10-formyltetrahydrofolate dehydrogenase and Gossypol complex
分子名称: Cytosolic 10-formyltetrahydrofolate dehydrogenase, Gossypol
著者Han, C.W, Lee, H.N, Jeong, M.S, Jang, S.B.
登録日2022-07-20
公開日2023-07-26
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (6.31 Å)
主引用文献Structural identification and comprehension of human ALDH1L1-Gossypol complex.
Biochem.Biophys.Res.Commun., 726, 2024
7Y72
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SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
分子名称: Fab E7 heavy chain, Fab E7 light chain, Spike glycoprotein
著者Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
登録日2022-06-21
公開日2023-08-02
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
7Y71
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SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab E7 heavy chain, ...
著者Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
登録日2022-06-21
公開日2023-08-02
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
7UMJ
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Crystal structure of recombinant Solieria filiformis lectin (rSfL)
分子名称: Lectin SfL-1, SULFATE ION
著者Chaves, R.P, Bezerra, E.H.S, da Silva, F.M.S, Carneiro, R.F, Sampaio, A.H, Rocha, B.A.M, Nagano, C.S.
登録日2022-04-07
公開日2023-10-11
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural study and antimicrobial and wound healing effects of lectin from Solieria filiformis (Kutzing) P.W.Gabrielson.
Biochimie, 214, 2023
7W1G
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Crystal structure of YfiH with C107A mutation in complex with UDP-MurNAc-L-Serine
分子名称: (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, (2S)-2-[[(2R)-2-[(2R,3R,4R,5S,6R)-3-acetamido-2-[[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-6-(hydroxymethyl)-5-oxidanyl-oxan-4-yl]oxypropanoyl]amino]-3-oxidanyl-propanoic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Lee, S.H, Hsieh, K.Y, Lee, M.S, Chang, C.I.
登録日2021-11-19
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural Basis for the Peptidoglycan-Editing Activity of YfiH.
Mbio, 13, 2021
7WSV
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BU of 7wsv by Molmil
Cryo-EM structure of the N-terminal deletion mutant of human pannexin-1 in a nanodisc
分子名称: Pannexin-1
著者Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2022-02-01
公開日2022-02-16
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
4NG4
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BU of 4ng4 by Molmil
Structure of phosphoglycerate kinase (CBU_1782) from Coxiella burnetii
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoglycerate kinase
著者Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
登録日2013-11-01
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
4NZW
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Crystal Structure of STK25-MO25 Complex
分子名称: 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE, Calcium-binding protein 39, Serine/threonine-protein kinase 25
著者Feng, M, Hao, Q, Zhou, Z.C.
登録日2013-12-13
公開日2014-12-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.583 Å)
主引用文献Structural insights into regulatory mechanisms of MO25-mediated kinase activation.
J.Struct.Biol., 186, 2014
7Z6R
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Psychrobacter arcticus ATPPRT (HisGZ) R56A mutant bound to ATP and PRPP
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP phosphoribosyltransferase, ...
著者Alphey, M.S, Fisher, G, da Silva, R.G.
登録日2022-03-14
公開日2022-03-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Allosteric rescue of catalytically impaired ATP phosphoribosyltransferase variants links protein dynamics to active-site electrostatic preorganisation.
Nat Commun, 13, 2022
7Z8U
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Catalytic subunit HisG R56A mutant from Psychrobacter arcticus ATPPRT (HisGZ) in complex with ATP and PRPP
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP phosphoribosyltransferase, ...
著者Alphey, M.S, Fisher, G, da Silva, R.G.
登録日2022-03-18
公開日2022-03-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Allosteric rescue of catalytically impaired ATP phosphoribosyltransferase variants links protein dynamics to active-site electrostatic preorganisation.
Nat Commun, 13, 2022
7Z9F
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Human anionic trypsin after autoproteolysis at Arg122
分子名称: CALCIUM ION, Trypsin-2
著者Nagel, F, Palm, G.J, Delcea, M, Lammers, M.
登録日2022-03-21
公開日2022-06-29
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis of the Pancreatitis-Associated Autoproteolytic Failsafe Mechanism in Human Anionic Trypsin.
J Inflamm Res, 15, 2022
4R50
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Crystal Structure of CNG mimicking NaK-ETPP mutant cocrystallized with Li+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, Potassium channel protein
著者De March, M, Napolitano, L.M.R, Onesti, S.
登録日2014-08-20
公開日2015-07-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels.
Proc.Natl.Acad.Sci.USA, 112, 2015
3POR
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PORIN CONFORMATION IN THE ABSENCE OF CALCIUM; REFINED STRUCTURE AT 2.5 ANGSTROMS RESOLUTION
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PORIN
著者Weiss, M.S, Schulz, G.E.
登録日1992-11-09
公開日1993-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Porin conformation in the absence of calcium. Refined structure at 2.5 A resolution.
J.Mol.Biol., 231, 1993
4QQK
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Human HMT1 hnRNP methyltransferase-like protein 6 (S. cerevisiae) with GMS
分子名称: (5S)-5-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}-N~6~-carbamimidoyl-L-lysine, GLYCEROL, Protein arginine N-methyltransferase 6, ...
著者Dong, A, Zeng, H, He, H, Wernimont, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Luo, M, Wu, H, Structural Genomics Consortium (SGC)
登録日2014-06-27
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural basis of arginine asymmetrical dimethylation by PRMT6.
Biochem. J., 473, 2016
4RBY
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First X-ray structure of RNA containing guanosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*(2SG)P*AP*AP*UP*UP*AP*GP*CP*G)-3', STRONTIUM ION
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
4RC0
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X-ray structure of RNA containing guanosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*(A2M)P*(2SG)P*CP*G)-3'
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
3EE6
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Crystal Structure Analysis of Tripeptidyl peptidase -I
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Pal, A, Kraetzner, R, Grapp, M, Gruene, T, Schreiber, K, Granborg, M, Urlaub, H, Asif, A.R, Becker, S, Gartner, J, Sheldrick, G.M, Steinfeld, R.
登録日2008-09-04
公開日2008-11-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of tripeptidyl-peptidase I provides insight into the molecular basis of late infantile neuronal ceroid lipofuscinosis
J.Biol.Chem., 284, 2009
3EQN
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Crystal structure of beta-1,3-glucanase from Phanerochaete chrysosporium (Lam55A)
分子名称: ACETATE ION, GLYCEROL, Glucan 1,3-beta-glucosidase, ...
著者Ishida, T, Fushinobu, S, Kawai, R, Kitaoka, M, Igarashi, K, Samejima, M.
登録日2008-10-01
公開日2009-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of glycoside hydrolase family 55 beta -1,3-glucanase from the basidiomycete Phanerochaete chrysosporium
J.Biol.Chem., 284, 2009
3EQO
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Crystal structure of beta-1,3-glucanase from Phanerochaete chrysosporium (Lam55A) gluconolactone complex
分子名称: D-glucono-1,5-lactone, Glucan 1,3-beta-glucosidase, ZINC ION, ...
著者Ishida, T, Fushinobu, S, Kawai, R, Kitaoka, M, Igarashi, K, Samejima, M.
登録日2008-10-01
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of glycoside hydrolase family 55 beta -1,3-glucanase from the basidiomycete Phanerochaete chrysosporium
J.Biol.Chem., 284, 2009
4QVL
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yCP in complex with bortezomib
分子名称: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ...
著者Huber, E.M, Heinemeyer, W, Groll, M.
登録日2014-07-15
公開日2015-02-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015

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