Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51964 件

4YKG
DownloadVisualize
BU of 4ykg by Molmil
Crystal Structure of the Alkylhydroperoxide Reductase subunit F (AhpF) with NAD+ from Escherichia coli
分子名称: Alkyl hydroperoxide reductase subunit F, CADMIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Kamariah, N, Manimekalai, M.S.S, Gruber, G, Eisenhaber, F, Eisenhaber, B.
登録日2015-03-04
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and solution studies of NAD(+)- and NADH-bound alkylhydroperoxide reductase subunit F (AhpF) from Escherichia coli provide insight into sequential enzymatic steps
Biochim.Biophys.Acta, 1847, 2015
5MNW
DownloadVisualize
BU of 5mnw by Molmil
Solution structure of the cinaciguat bound human beta1 H-NOX.
分子名称: 4-({(4-carboxybutyl)[2-(2-{[4-(2-phenylethyl)benzyl]oxy}phenyl)ethyl]amino}methyl)benzoic acid, Guanylate cyclase soluble subunit beta-1
著者Matzapetakis, M, Saraiva, I.H.
登録日2016-12-13
公開日2018-06-13
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution structure of the cinaciguat bound human beta1 H-NOX.
To Be Published
5CJ3
DownloadVisualize
BU of 5cj3 by Molmil
Crystal structure of the zorbamycin binding protein (ZbmA) from Streptomyces flavoviridis with zorbamycin
分子名称: CHLORIDE ION, COPPER (II) ION, Zbm binding protein, ...
著者Chang, C, Bigelow, L, Clancy, S, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Rudolf, J.D, Ma, M, Chang, C.-Y, Lohman, J.R, Yang, D, Shen, B, Enzyme Discovery for Natural Product Biosynthesis, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-07-13
公開日2015-07-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6499 Å)
主引用文献Crystal Structure of the Zorbamycin-Binding Protein ZbmA, the Primary Self-Resistance Element in Streptomyces flavoviridis ATCC21892.
Biochemistry, 54, 2015
7EI2
DownloadVisualize
BU of 7ei2 by Molmil
Structure of human NNMT in complex with macrocyclic peptide 8
分子名称: Nicotinamide N-methyltransferase, macrocyclic peptide 8
著者Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
登録日2021-03-30
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
7EFH
DownloadVisualize
BU of 7efh by Molmil
RNA kink-turn motif
分子名称: RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3')
著者Kondo, J, Nagashima, M.
登録日2021-03-21
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献RNA kink-turn motif
To Be Published
331D
DownloadVisualize
BU of 331d by Molmil
CRYSTAL STRUCTURE OF D(GCGCGCG) WITH 5'-OVERHANG G'S
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*GP*CP*GP*CP*G)-3')
著者Pan, B, Ban, C, Wahl, M, Sundaralingam, M.
登録日1997-05-13
公開日1997-09-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of d(GCGCGCG) with 5'-overhang G residues.
Biophys.J., 73, 1997
5MXL
DownloadVisualize
BU of 5mxl by Molmil
Peptide-membrane interaction between targeting and lysis
分子名称: GLY-LEU-PHE-ASP-ILE-VAL-LYS-LYS-VAL-VAL-GLY-ALA-LEU-GLY-NH2
著者Schneider, G, Blatter, M.
登録日2017-01-23
公開日2017-02-22
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Peptide-Membrane Interaction between Targeting and Lysis.
ACS Chem. Biol., 12, 2017
5MWW
DownloadVisualize
BU of 5mww by Molmil
Sigma1.1 domain of sigmaA from Bacillus subtilis
分子名称: RNA polymerase sigma factor SigA
著者Zachrdla, M, Padrta, P, Rabatinova, A, Sanderova, H, Barvik, I, Krasny, L, Zidek, L.
登録日2017-01-20
公開日2017-06-14
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution structure of domain 1.1 of the sigma (A) factor from Bacillus subtilis is preformed for binding to the RNA polymerase core.
J. Biol. Chem., 292, 2017
5MZF
DownloadVisualize
BU of 5mzf by Molmil
Crystal structure of dog MTH1 protein
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Narwal, M, Jemth, A.-S, Helleday, T, Stenmark, P.
登録日2017-01-31
公開日2018-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures and Inhibitor Interactions of Mouse and Dog MTH1 Reveal Species-Specific Differences in Affinity.
Biochemistry, 57, 2018
5COE
DownloadVisualize
BU of 5coe by Molmil
The structure of the NK1 fragment of HGF/SF complexed with HEPES
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hepatocyte growth factor
著者Sigurdardottir, A.G, Winter, A, Sobkowicz, A, Fragai, M, Ascher, D.B, Chirgadze, D.Y, Blundell, T.L, Gherardi, E.
登録日2015-07-20
公開日2015-08-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding.
Chem Sci, 6, 2015
5MZQ
DownloadVisualize
BU of 5mzq by Molmil
X-ray structure of the M205W mutant of GLIC in complex with bromoform
分子名称: (3R)-3-(dodecanoyloxy)tetradecanoic acid, 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ACETATE ION, ...
著者Fourati, Z, Delarue, M.
登録日2017-02-01
公開日2018-02-28
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for a Bimodal Allosteric Mechanism of General Anesthetic Modulation in Pentameric Ligand-Gated Ion Channels.
Cell Rep, 23, 2018
5BYY
DownloadVisualize
BU of 5byy by Molmil
ERK5 IN COMPLEX WITH SMALL MOLECULE
分子名称: 2-{[2-ethoxy-4-(4-hydroxypiperidin-1-yl)phenyl]amino}-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Mitogen-activated protein kinase 7
著者Chen, H, Tucker, J, Wang, X, Gavine, P.R, Philips, C, Augustin, M.A, Schreiner, P, Steinbacher, S, Preston, M, Ogg, D.
登録日2015-06-11
公開日2016-05-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Discovery of a novel allosteric inhibitor-binding site in ERK5: comparison with the canonical kinase hinge ATP-binding site.
Acta Crystallogr D Struct Biol, 72, 2016
5BZ2
DownloadVisualize
BU of 5bz2 by Molmil
CRYSTAL STRUCTURE OF THE SODIUM PROTON ANTIPORTER NAPA IN INWARD-FACING CONFORMATION
分子名称: Na(+)/H(+) antiporter
著者Coincon, M, Uzdavinys, P, Cameron, A, Drew, D.
登録日2015-06-11
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters.
Nat.Struct.Mol.Biol., 23, 2016
5N0M
DownloadVisualize
BU of 5n0m by Molmil
hPAD4 crystal complex with BB-F-amidine
分子名称: CALCIUM ION, Protein-arginine deiminase type-4, SULFATE ION, ...
著者Beaumont, E, Kerry, P, Thompson, P, Muth, A, Subramanian, V, Nagar, M, Srinath, H, Clancy, K, Parelkar, S.
登録日2017-02-03
公開日2017-05-24
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Development of a Selective Inhibitor of Protein Arginine Deiminase 2.
J. Med. Chem., 60, 2017
5C92
DownloadVisualize
BU of 5c92 by Molmil
Novel fungal alcohol oxidase with catalytic diversity among the AA5 family, in complex with copper
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, COPPER (I) ION, ...
著者Urresti, S, Yin, D.T, LaFond, M, Derikvand, F, Berrin, G.J, Henrissat, B, Walton, P.H, Brumer, H, Davies, G.J.
登録日2015-06-26
公開日2015-07-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family.
Nat Commun, 6, 2015
3VC0
DownloadVisualize
BU of 3vc0 by Molmil
Crystal structure of Taipoxin beta subunit isoform 1
分子名称: Phospholipase A2 homolog, taipoxin beta chain
著者Cendron, L, Micetic, I, Polverino de Laureto, P, Beltramini, M, Paoli, M.
登録日2012-01-03
公開日2012-07-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural analysis of trimeric phospholipase A(2) neurotoxin from the Australian taipan snake venom.
Febs J., 279, 2012
5CBV
DownloadVisualize
BU of 5cbv by Molmil
Human Cyclophilin D Complexed with Inhibitor
分子名称: FORMIC ACID, Human Cyclophilin D, POTASSIUM ION, ...
著者Gibson, R.P, Shore, E, Kershaw, N, Awais, M, Javed, A, Latawiec, D, Pandalaneni, S, Wen, L, Berry, N, O'Neill, P, Sutton, R, Lian, L.Y.
登録日2015-07-01
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Human Cyclophilin D Complexed with Inhibitor
To Be Published
7ELK
DownloadVisualize
BU of 7elk by Molmil
Solution structure of Terfa derived from Danio rerio
分子名称: Terfa protein
著者Yun, J.H, Kim, M, Lee, W.
登録日2021-04-11
公開日2022-04-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Terfa derived from Danio rerio
To Be Published
7EFG
DownloadVisualize
BU of 7efg by Molmil
RNA kink-turn motif
分子名称: RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3')
著者Kondo, J, Nagashima, M.
登録日2021-03-21
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献RNA kink-turn motif
To Be Published
5C3C
DownloadVisualize
BU of 5c3c by Molmil
Structural characterization of a newly identified component of alpha-carboxysomes: The AAA+ domain Protein cso-CbbQ
分子名称: ADENOSINE-5'-DIPHOSPHATE, CbbQ/NirQ/NorQ domain protein
著者Sutter, M, Kerfeld, C.A.
登録日2015-06-17
公開日2015-11-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Characterization of a Newly Identified Component of alpha-Carboxysomes: The AAA+ Domain Protein CsoCbbQ.
Sci Rep, 5, 2015
5C4P
DownloadVisualize
BU of 5c4p by Molmil
Crystal structure of ArsI C-As lyase solved by Ni-SAD phasing
分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase, NICKEL (II) ION
著者Venkadesh, S, Yoshinaga, M, Kandavelu, P, Rosen, B.P.
登録日2015-06-18
公開日2016-07-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of ArsI C-As lyase from Thermomonospora curvata
To Be Published
7EIF
DownloadVisualize
BU of 7eif by Molmil
Crystal structure of GAS41 YEATS domain
分子名称: GLYCEROL, YEATS domain-containing protein 4
著者Kikuchi, M, Umehara, T.
登録日2021-03-30
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献GAS41 promotes H2A.Z deposition through recognition of the N terminus of histone H3 by the YEATS domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
7EKU
DownloadVisualize
BU of 7eku by Molmil
Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (W958A)
分子名称: 4-alpha-glucanotransferase
著者Shen, M, Xiang, S.
登録日2021-04-06
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (W958A)
To Be Published
5CG5
DownloadVisualize
BU of 5cg5 by Molmil
Neutron crystal structure of human farnesyl pyrophosphate synthase in complex with risedronate
分子名称: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, Farnesyl pyrophosphate synthase, MAGNESIUM ION
著者Yokoyama, T, Mizuguchi, M, Ostermann, A, Kusaka, K, Niimura, N, Schrader, T.E, Tanaka, I.
登録日2015-07-09
公開日2015-10-14
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.402 Å), X-RAY DIFFRACTION
主引用文献Protonation State and Hydration of Bisphosphonate Bound to Farnesyl Pyrophosphate Synthase
J.Med.Chem., 58, 2015
7EG5
DownloadVisualize
BU of 7eg5 by Molmil
FMN-bound form of YviC from Lactococcus lactis subsp. lactis Il1403
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Sugiura, N, Nakanishi, T, Kitamura, M.
登録日2021-03-24
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献FMN-bound form of YviC from Lactococcus lactis subsp. lactis Il1403
To Be Published

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon