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PDB: 52161 件

7WX1
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E40K/M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Narikiyo, S, Furukawa, Y, Akutsu, M.
登録日2022-02-14
公開日2023-02-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
7WYR
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Crystal structure of Cypovirus Polyhedra mutant fused with CLN025
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Polyhedrin fused with CLN025
著者Kojima, M, Abe, S, Hirata, K, Yamashita, K, Ueno, T.
登録日2022-02-16
公開日2023-02-22
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Engineering of an in-cell protein crystal for fastening a metastable conformation of a target miniprotein.
Biomater Sci, 11, 2023
6LIJ
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Crassostrea gigas ferritin
分子名称: Ferritin, MAGNESIUM ION
著者Li, H, Zang, J, Tan, X, Wang, Z, Du, M.
登録日2019-12-11
公開日2020-12-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crassostrea gigas ferritin
To Be Published
7X9G
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Crystal structure of human EDA and EDAR
分子名称: Ectodysplasin-A, secreted form, Tumor necrosis factor receptor superfamily member EDAR
著者Yu, K, Wan, F, Huang, C, Wu, J, Lei, M.
登録日2022-03-15
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into pathogenic mechanism of hypohidrotic ectodermal dysplasia caused by ectodysplasin A variants.
Nat Commun, 14, 2023
6LI5
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BU of 6li5 by Molmil
Crystal structure of apo-MCR-1-S
分子名称: Probable phosphatidylethanolamine transferase Mcr-1
著者Zhang, Q, Wang, M, Sun, H.
登録日2019-12-10
公開日2020-09-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
6LI4
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Crystal structure of MCR-1-S
分子名称: Probable phosphatidylethanolamine transferase Mcr-1, ZINC ION
著者Zhang, Q, Wang, M, Sun, H.
登録日2019-12-10
公開日2020-09-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
5OXZ
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BU of 5oxz by Molmil
Crystal Structure of NeqN/NeqC complex from Nanoarcheaum equitans at 1.2A
分子名称: NEQ068, NEQ528
著者Aparicio, D, Perez-Luque, R, Ribo, M, Fita, I.
登録日2017-09-07
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural Insights into Subunits Assembly and the Oxyester Splicing Mechanism of Neq pol Split Intein.
Cell Chem Biol, 25, 2018
6L23
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BU of 6l23 by Molmil
Crystal structure of CK2a1 V116I with hematein
分子名称: (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one, 1,2-ETHANEDIOL, Casein kinase II subunit alpha
著者Tsuyuguchi, M, Kinoshita, T.
登録日2019-10-02
公開日2021-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97449422 Å)
主引用文献Structural insights for producing CK2 alpha 1-specific inhibitors.
Bioorg.Med.Chem.Lett., 30, 2020
5OOI
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STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA') IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
分子名称: 1,2-ETHANEDIOL, 4-(3-methylbut-2-enoxy)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione, ACETATE ION, ...
著者Hochscherf, J, Lindenblatt, D, Witulski, B, Birus, R, Aichele, D, Marminon, C, Bouaziz, Z, Le Borgne, M, Jose, J, Niefind, K.
登録日2017-08-07
公開日2017-12-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Unexpected Binding Mode of a Potent Indeno[1,2-b]indole-Type Inhibitor of Protein Kinase CK2 Revealed by Complex Structures with the Catalytic Subunit CK2 alpha and Its Paralog CK2 alpha '.
Pharmaceuticals (Basel), 10, 2017
6LCI
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BU of 6lci by Molmil
Solution structure of mdaA-1 domain
分子名称: mdaA-1
著者Nguyen, T.A, Le, S, Lee, M, Fan, J.S, Yang, D, Yan, J, Jedd, G.
登録日2019-11-19
公開日2020-11-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Fungal Wound Healing through Instantaneous Protoplasmic Gelation.
Curr.Biol., 31, 2021
7X4U
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BU of 7x4u by Molmil
Crystal structure of ERK2 with an allosteric inhibitor 2
分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Yoshida, M, Kinoshita, T.
登録日2022-03-03
公開日2023-03-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural basis for producing allosteric ERK2 inhibitors
To Be Published
4WLA
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BU of 4wla by Molmil
Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Tenboer, J, Schmidt, M.
登録日2014-10-06
公開日2014-12-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.
Science, 346, 2014
6LOP
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BU of 6lop by Molmil
Crystal Structure of Class IB terpene synthase bound with geranylgeraniol
分子名称: (2~{E},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-ol, Tetraprenyl-beta-curcumene synthase
著者Fujihashi, M, Inagi, H, Miki, K.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Characterization of Class IB Terpene Synthase: The First Crystal Structure Bound with a Substrate Surrogate.
Acs Chem.Biol., 15, 2020
4WH2
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BU of 4wh2 by Molmil
N-acetylhexosamine 1-kinase in complex with ADP
分子名称: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Sato, M, Arakawa, T, Nam, Y.W, Nishimoto, M, Kitaoka, M, Fushinobu, S.
登録日2014-09-19
公開日2015-02-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.847 Å)
主引用文献Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase
Biochim.Biophys.Acta, 1854, 2015
6LL8
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BU of 6ll8 by Molmil
Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mg-PNP form
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, FLUORIDE ION, ...
著者Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K.
登録日2019-12-21
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
Sci Rep, 10, 2020
6LQH
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BU of 6lqh by Molmil
High resolution architecture of curli complex
分子名称: Curli production assembly/transport component CsgF, Curli production assembly/transport component CsgG
著者Zhang, M, Shi, H, Huang, Y.
登録日2020-01-13
公開日2020-07-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Cryo-EM structure of the nonameric CsgG-CsgF complex and its implications for controlling curli biogenesis in Enterobacteriaceae.
Plos Biol., 18, 2020
4WH1
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BU of 4wh1 by Molmil
N-Acetylhexosamine 1-kinase (ligand free)
分子名称: ACETIC ACID, GLYCEROL, N-acetylhexosamine 1-kinase
著者Sato, M, Arakawa, T, Nam, Y.W, Nishimoto, M, Kitaoka, M, Fushinobu, S.
登録日2014-09-19
公開日2015-02-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase
Biochim.Biophys.Acta, 1854, 2015
7XC1
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BU of 7xc1 by Molmil
Crystal structure of ERK2 with an allosteric inhibitor 3
分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Yoshida, M, Kinoshita, T.
登録日2022-03-22
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural basis for ERK2 allosteric inhibitors.
To Be Published
6LTU
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BU of 6ltu by Molmil
Crystal structure of Cas12i2 ternary complex with double Mg2+ bound in catalytic pocket
分子名称: 1,2-ETHANEDIOL, Cas12i2, DNA (35-MER), ...
著者Huang, X, Sun, W, Cheng, Z, Chen, M, Li, X, Wang, J, Sheng, G, Gong, W, Wang, Y.
登録日2020-01-23
公開日2020-10-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2.
Nat Commun, 11, 2020
4WJQ
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BU of 4wjq by Molmil
Crystal Structure of SUMO1 in complex with Daxx
分子名称: Daxx, Small ubiquitin-related modifier 1
著者Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
登録日2014-10-01
公開日2014-12-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
6LLG
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Crystal Structure of Fagopyrum esculentum M UGT708C1
分子名称: BENZAMIDINE, SULFATE ION, UDP-glycosyltransferase 708C1
著者Wang, X, Liu, M.
登録日2019-12-23
公開日2020-09-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of theC-Glycosyltransferase UGT708C1 from Buckwheat Provide Insights into the Mechanism ofC-Glycosylation.
Plant Cell, 32, 2020
4WFR
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BU of 4wfr by Molmil
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation T232A, complexed with 2'-AMP
分子名称: 2',3'-cyclic-nucleotide 3'-phosphodiesterase, ADENOSINE-2'-MONOPHOSPHATE
著者Myllykoski, M, Raasakka, A, Kursula, P.
登録日2014-09-17
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Determinants of ligand binding and catalytic activity in the myelin enzyme 2',3'-cyclic nucleotide 3'-phosphodiesterase.
Sci Rep, 5, 2015
6LKD
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in meso full-length rat KMO in complex with a pyrazoyl benzoic acid inhibitor
分子名称: 5-[5-(4-chloranyl-3-fluoranyl-phenyl)-4-methyl-pyrazol-1-yl]-2-phenylmethoxy-benzoic acid, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mimasu, S, Yamagishi, H, Kiyohara, M, Kakefuda, K, Okuda, T.
登録日2019-12-19
公開日2020-12-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Full-length in meso structure and mechanism of rat kynurenine 3-monooxygenase inhibition.
Commun Biol, 4, 2021
6LKT
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Crystal structure of the Fab fragment of murine monoclonal antibody KH-1 against Human herpesvirus 6B
分子名称: antibody Fab Fragment L-chain, antibody Fab fragment H chain
著者Nishimura, M, Novita, B.D, Kato, T, Tjan, L.H, Wang, B, Wakata, A, Poetranto, A.L, Kawabata, A, Tang, H, Aoshi, T, Mori, Y.
登録日2019-12-20
公開日2020-06-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the interaction of human herpesvirus 6B tetrameric glycoprotein complex with the cellular receptor, human CD134.
Plos Pathog., 16, 2020
6LLZ
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Crystal Structure of Fagopyrum esculentum M UGT708C1 complexed with UDP-glucose
分子名称: UDP-glycosyltransferase 708C1, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Wang, X, Liu, M.
登録日2019-12-24
公開日2020-09-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Crystal Structures of theC-Glycosyltransferase UGT708C1 from Buckwheat Provide Insights into the Mechanism ofC-Glycosylation.
Plant Cell, 32, 2020

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