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PDB: 51689 results

6SEI
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BU of 6sei by Molmil
Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease
Descriptor: CALCIUM ION, DNA (32-MER), Structure-specific endonuclease subunit SLX1, ...
Authors:Gaur, V, Zajko, W, Nirwal, S, Szlachcic, A, Gapinska, M, Nowotny, M.
Deposit date:2019-07-30
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease.
Nucleic Acids Res., 47, 2019
6F2G
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BU of 6f2g by Molmil
Bacterial asc transporter crystal structure in open to in conformation
Descriptor: Nanobody 74, Putative amino acid/polyamine transport protein, ZINC ION
Authors:Fort, J, Errasti-Murugarren, E, Carpena, X, Palacin, M, Fita, I.
Deposit date:2017-11-24
Release date:2019-04-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:L amino acid transporter structure and molecular bases for the asymmetry of substrate interaction.
Nat Commun, 10, 2019
6SGF
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BU of 6sgf by Molmil
Molecular insight into a new low affinity xylan binding module CBM86, from the xylanolytic gut symbiont Roseburia intestinalis.
Descriptor: Beta-xylanase, CADMIUM ION, CHLORIDE ION, ...
Authors:Ejby, M, Abou Hachem, M, Leth, M.L, Guskov, A, Slotboom, D.
Deposit date:2019-08-04
Release date:2019-11-20
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.756 Å)
Cite:Molecular insight into a new low-affinity xylan binding module from the xylanolytic gut symbiont Roseburia intestinalis.
Febs J., 287, 2020
6F2W
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BU of 6f2w by Molmil
Bacterial asc transporter crystal structure in open to in conformation
Descriptor: ALPHA-AMINOISOBUTYRIC ACID, Nanobody 74, Putative amino acid/polyamine transport protein, ...
Authors:Fort, J, Errasti-Murugarren, E, Carpena, X, Palacin, M, Fita, I.
Deposit date:2017-11-27
Release date:2019-04-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:L amino acid transporter structure and molecular bases for the asymmetry of substrate interaction.
Nat Commun, 10, 2019
5BY9
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BU of 5by9 by Molmil
The crystal structure of polyglycilated 14-3-3 protein from Giardia intestinalis
Descriptor: 14-3-3 protein
Authors:Fiorillo, A, Ilari, A, Lalle, M.
Deposit date:2015-06-10
Release date:2016-04-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4 Å)
Cite:Molecular Dynamics Simulations and Structural Analysis of Giardia duodenalis 14-3-3 Protein-Protein Interactions.
J.Chem.Inf.Model., 55, 2015
3O56
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BU of 3o56 by Molmil
Catalytic domain of human phosphodiesterase 4b2b in complex with a 5-heterocycle pyrazolopyridine inhibitor
Descriptor: 1-ethyl-5-[3-(2-oxo-2-pyrrolidin-1-ylethyl)-1,2,4-oxadiazol-5-yl]-N-(tetrahydro-2H-pyran-4-yl)-1H-pyrazolo[3,4-b]pyridin-4-amine, ARSENIC, GLYCEROL, ...
Authors:Somers, D.O, Neu, M.
Deposit date:2010-07-28
Release date:2011-08-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Pyrazolopyridines as potent PDE4B inhibitors: 5-heterocycle SAR.
Bioorg.Med.Chem.Lett., 20, 2010
6PBI
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BU of 6pbi by Molmil
Crystal Structure of EcDsbA in a complex with purified morpholine 8
Descriptor: 2-methyl-4-{4-[2-(morpholin-4-yl)-2-oxoethyl]phenoxy}benzonitrile, COPPER (II) ION, Thiol:disulfide interchange protein DsbA
Authors:Ilyichova, O.V, Bentley, M, Doak, B, Scanlon, M.J.
Deposit date:2019-06-13
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rapid Elaboration of Fragments into Leads by X-ray Crystallographic Screening of Parallel Chemical Libraries (REFiL X ).
J.Med.Chem., 63, 2020
1XDF
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BU of 1xdf by Molmil
Crystal structure of pathogenesis-related protein LlPR-10.2A from yellow lupine
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PR10.2A, SODIUM ION
Authors:Pasternak, O, Biesiadka, J, Dolot, R, Handschuh, L, Bujacz, G, Sikorski, M.M, Jaskolski, M.
Deposit date:2004-09-06
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a yellow lupin pathogenesis-related PR-10 protein belonging to a novel subclass.
Acta Crystallogr.,Sect.D, 61, 2005
1SUX
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BU of 1sux by Molmil
CRYSTALLOGRAPHIC ANALYSIS OF THE COMPLEX BETWEEN TRIOSEPHOSPHATE ISOMERASE FROM TRYPANOSOMA CRUZI AND 3-(2-benzothiazolylthio)-1-propanesulfonic acid
Descriptor: 3-(2-BENZOTHIAZOLYLTHIO)-1-PROPANESULFONIC ACID, SULFATE ION, Triosephosphate isomerase, ...
Authors:Tellez-Valencia, A, Olivares-Illana, V, Hernandez-Santoyo, A, Perez-Montfort, R, Costas, M, Rodriguez-Romero, A, Tuena De Gomez-Puyou, M, Gomez-Puyou, A.
Deposit date:2004-03-26
Release date:2004-08-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inactivation of triosephosphate isomerase from Trypanosoma cruzi by an agent that perturbs its dimer interface.
J.Mol.Biol., 341, 2004
1BW0
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BU of 1bw0 by Molmil
CRYSTAL STRUCTURE OF TYROSINE AMINOTRANSFERASE FROM TRYPANOSOMA CRUZI
Descriptor: PROTEIN (TYROSINE AMINOTRANSFERASE)
Authors:Blankenfeldt, W, Montemartini, M, Hunter, G.R, Kalisz, H.M, Nowicki, C, Hecht, H.J.
Deposit date:1998-09-28
Release date:1999-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Trypanosoma cruzi tyrosine aminotransferase: substrate specificity is influenced by cofactor binding mode.
Protein Sci., 8, 1999
1X9R
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BU of 1x9r by Molmil
Umecyanin from Horse Raddish- Crystal Structure of the oxidised form
Descriptor: COPPER (II) ION, Umecyanin
Authors:Koch, M, Velarde, M, Harrison, M.D, Echt, S, Fischer, M, Messerschmidt, A, Dennison, C.
Deposit date:2004-08-24
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of Oxidized and Reduced Stellacyanin from Horseradish Roots
J.Am.Chem.Soc., 127, 2005
1JKA
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BU of 1jka by Molmil
HUMAN LYSOZYME MUTANT WITH GLU 35 REPLACED BY ASP
Descriptor: LYSOZYME, NITRATE ION
Authors:Muraki, M, Harata, K, Goda, S, Nagahora, H.
Deposit date:1996-11-13
Release date:1997-05-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Importance of van der Waals contact between Glu 35 and Trp 109 to the catalytic action of human lysozyme.
Protein Sci., 6, 1997
6AWT
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BU of 6awt by Molmil
Structure of PR 10 Allergen in complex with epicatechin
Descriptor: (2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol, BENZOIC ACID, PR 10 protein, ...
Authors:Offermann, L.R, Perdue, M, McBride, J, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Chruszcz, M.
Deposit date:2017-09-06
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of PR-10 Allergen Ara h 8.01.
To Be Published
6ETZ
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BU of 6etz by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB
Descriptor: ACETATE ION, Beta-galactosidase, MALONATE ION, ...
Authors:Rutkiewicz-Krotewicz, M, Bujacz, A, Bujacz, G.
Deposit date:2017-10-27
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In Situ Random Microseeding and Streak Seeding Used for Growth of Crystals of Cold-Adapted Beta-D-Galactosidases: Crystal Structure of BetaDG from Arthrobacter sp. 32cB
Crystals, 8, 2018
6SED
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BU of 6sed by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose
Descriptor: ACETATE ION, Beta-galactosidase, FORMIC ACID, ...
Authors:Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
Deposit date:2019-07-29
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.233 Å)
Cite:Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
3NZJ
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BU of 3nzj by Molmil
Crystal structure of yeast 20S proteasome in complex with ligand 2a
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Gallastegui, N, Marechal, X, Le Ravalec, V, Basse, N, Richy, N, Genin, E, Huber, R, Moroder, M, Vidal, V, Reboud-Ravaux, M.
Deposit date:2010-07-16
Release date:2011-02-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:20S proteasome inhibition: designing noncovalent linear peptide mimics of the natural product TMC-95A.
Chemmedchem, 5, 2010
5IJD
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BU of 5ijd by Molmil
The crystal structure of mouse TLR4/MD-2/lipid A complex
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, Y, Su, L, Morin, M.D, Jones, B.T, Whitby, L.R, Surakattula, M, Huang, H, Shi, H, Choi, J.H, Wang, K, Moresco, E.M, Berger, M, Zhan, X, Zhang, H, Boger, D.L, Beutler, B.
Deposit date:2016-03-01
Release date:2016-04-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:TLR4/MD-2 activation by a synthetic agonist with no similarity to LPS.
Proc.Natl.Acad.Sci.USA, 113, 2016
6FLG
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BU of 6flg by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3(S)-(naphthylthio)succinyl-CPS1 peptide
Descriptor: 1,2-ETHANEDIOL, 3(S)-(naphthylthio)succinyl-CPS1 peptide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Pannek, M, Steegborn, C.
Deposit date:2018-01-25
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Potent and Selective Inhibitors of Human Sirtuin 5.
J. Med. Chem., 61, 2018
6SJJ
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BU of 6sjj by Molmil
A new modulated crystal structure of ANS complex of St John's wort Hyp-1 protein with 36 protein molecules in the asymmetric unit of the supercell
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-ANILINO-1-NAPHTHALENE SULFONATE, CITRATE ANION, ...
Authors:Smietanska, J, Sliwiak, J, Gilski, M, Dauter, Z, Strzalka, R, Wolny, J, Jaskolski, M.
Deposit date:2019-08-13
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A new modulated crystal structure of the ANS complex of the St John's wort Hyp-1 protein with 36 protein molecules in the asymmetric unit of the supercell.
Acta Crystallogr D Struct Biol, 76, 2020
6SBQ
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BU of 6sbq by Molmil
The crystal structure of PfA-M1 in complex with 7-amino-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: DI(HYDROXYETHYL)ETHER, M1-family alanyl aminopeptidase, MALONATE ION, ...
Authors:Salomon, E, Schmitt, M, Mouray, E, McEwen, A.G, Torchy, M, Poussin-Courmontagne, P, Alavi, S, Tarnus, C, Cavarelli, J, Florent, I, Albrecht, S.
Deposit date:2019-07-22
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Aminobenzosuberone derivatives as PfA-M1 inhibitors: Molecular recognition and antiplasmodial evaluation.
Bioorg.Chem., 98, 2020
7OFQ
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BU of 7ofq by Molmil
The archaellum of Methanocaldococcus villosus
Descriptor: Archaellin, CALCIUM ION, UNKNOWN LIGAND
Authors:Isupov, M, Gambelli, L, Daum, B.
Deposit date:2021-05-05
Release date:2022-01-19
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:An archaellum filament composed of two alternating subunits.
Nat Commun, 13, 2022
2MUE
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BU of 2mue by Molmil
Structure Immunogenicity and Protectivity Relationship for the 1585 Malarial Peptide and Its Substitution Analogues
Descriptor: Merozoite surface protein 1
Authors:Espejo, F, Cubillos, M, Salazar, L, Guzman, F, Urquiza, M, Ocampo, M, Silva, Y, Rodriguez, R, Lioy, E, Patarroyo, M.
Deposit date:2014-09-08
Release date:2014-10-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure, Immunogenicity, and Protectivity Relationship for the 1585 Malarial Peptide and Its Substitution Analogues.
Angew.Chem.Int.Ed.Engl., 40, 2001
8C86
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BU of 8c86 by Molmil
Crystal structure of human transthyretin in complex with 3-O-methyltolcapone analogue 2
Descriptor: (2,4-dimethylphenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone, Transthyretin
Authors:Poonsiri, T, Benini, S, Loconte, V, Cianci, M.
Deposit date:2023-01-18
Release date:2024-01-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:3-O-Methyltolcapone and Its Lipophilic Analogues Are Potent Inhibitors of Transthyretin Amyloidogenesis with High Permeability and Low Toxicity.
Int J Mol Sci, 25, 2023
8C85
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BU of 8c85 by Molmil
Crystal structure of human transthyretin in complex with 3-O-methyltolcapone analogue 1
Descriptor: (3,5-dimethylphenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone, Transthyretin
Authors:Poonsiri, T, Benini, S, Loconte, V, Cianci, M.
Deposit date:2023-01-18
Release date:2024-01-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:3-O-Methyltolcapone and Its Lipophilic Analogues Are Potent Inhibitors of Transthyretin Amyloidogenesis with High Permeability and Low Toxicity.
Int J Mol Sci, 25, 2023
7F1I
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BU of 7f1i by Molmil
Designed enzyme RA61 M48K/I72D mutant: form II
Descriptor: Engineered Retroaldolase
Authors:Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
Deposit date:2021-06-09
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022

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