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PDB: 52161 results

9CF1
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BU of 9cf1 by Molmil
Parasitella parasitica Fanzor (PpFz) State 2
Descriptor: DNA non-target strand, DNA target strand, Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1, ...
Authors:Xu, P, Saito, M, Zhang, F.
Deposit date:2024-06-27
Release date:2024-09-11
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
3KR7
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BU of 3kr7 by Molmil
Human tankyrase 2 - catalytic PARP domain
Descriptor: GLYCEROL, SULFATE ION, Tankyrase-2, ...
Authors:Karlberg, T, Schutz, P, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kotenyova, T, Kotzsch, A, Kraulis, P, Nielsen, T.K, Moche, M, Nordlund, P, Nyman, T, Persson, C, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2009-11-18
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the interaction between tankyrase-2 and a potent Wnt-signaling inhibitor.
J.Med.Chem., 53, 2010
9EOF
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BU of 9eof by Molmil
Structure of the human INTS5/8/10/15 subcomplex
Descriptor: Integrator complex subunit 10, Integrator complex subunit 15, Integrator complex subunit 5, ...
Authors:Razew, M, Galej, W.P.
Deposit date:2024-03-14
Release date:2024-06-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural basis of the Integrator complex assembly and association with transcription factors.
Mol.Cell, 84, 2024
5M4J
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BU of 5m4j by Molmil
Crystal Structure of Wild-Type Human Prolidase with GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, PROLINE, ...
Authors:Wilk, P, Weiss, M.S, Mueller, U, Dobbek, H.
Deposit date:2016-10-18
Release date:2017-07-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Substrate specificity and reaction mechanism of human prolidase.
FEBS J., 284, 2017
8ZDV
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BU of 8zdv by Molmil
The cryoEM structure of H5N8 HA in an auto inhibited state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Li, R, Gao, J, Wang, L, Gui, M, Xiang, Y.
Deposit date:2024-05-03
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Multivalent interactions between fully glycosylated influenza virus hemagglutinins mediated by glycans at distinct N-glycosylation sites
To Be Published
9FZD
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BU of 9fzd by Molmil
Structure of OmpA-long in complex with nanobody Nb39
Descriptor: Nanobody 39, Outer membrane protein A
Authors:Ackle, F, Sorgenfrei, M, Seeger, M.A.
Deposit date:2024-07-05
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Rapid detection and capture of clinical Escherichia coli strains mediated by OmpA-targeting nanobodies
To Be Published
9J1S
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BU of 9j1s by Molmil
Human replication protein A: RPA70 subunit N-terminal domain
Descriptor: Replication protein A 70 kDa DNA-binding subunit
Authors:Chakraborty, M, Ganguly, S.S, Das, A.K, Ganguly, A.
Deposit date:2024-08-05
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Human replication protein A: RPA70 subunit N-terminal domain
To Be Published
8ZYN
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BU of 8zyn by Molmil
Cryo-EM Structure of inhibitor-free hERG Channel
Descriptor: Potassium voltage-gated channel subfamily H member 2
Authors:Miyashita, Y, Moriya, T, Kato, T, Kawasaki, M, Yasuda, Y, Adachi, N, Suzuki, K, Ogasawara, S, Saito, T, Senda, T, Murata, T.
Deposit date:2024-06-18
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Improved higher resolution cryo-EM structures reveal the binding modes of hERG channel inhibitors.
Structure, 2024
9G2A
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BU of 9g2a by Molmil
Staphylococcus aureus MazF in complex with nanobody 4
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endoribonuclease MazF, ...
Authors:Prolic-Kalinsek, M, Zorzini, V, Haesaerts, S, Loris, R.
Deposit date:2024-07-10
Release date:2024-07-17
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.046594 Å)
Cite:Staphylococcus aureus MazF in complex with nanobody 4.
To Be Published
9CI9
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BU of 9ci9 by Molmil
Crystal structure of human polymerase eta with incoming dCMPnPP nucleotide across threofuranosyl thymidine in DNA template at extension stage
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*A)-3'), DNA (5'-D(*CP*AP*TP*GP*(TFT)P*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Tomar, R, Stone, M.P, Egli, M.
Deposit date:2024-07-02
Release date:2024-09-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:DNA Replication across alpha-l-(3'-2')-Threofuranosyl Nucleotides Mediated by Human DNA Polymerase eta.
Biochemistry, 63, 2024
9GAG
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BU of 9gag by Molmil
Human PEX5 TPR domain in complex with PEX14 KIPSWQIPV peptide
Descriptor: Peroxisomal membrane protein PEX14, Peroxisomal targeting signal 1 receptor
Authors:Emmanouilidis, L, Gaussmann, S, Sattler, M.
Deposit date:2024-07-27
Release date:2024-09-11
Method:SOLUTION NMR
Cite:Humain complexn PEX5 TPR domain with PEX14 KIPSWQIPV peptide
To Be Published
9FYO
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BU of 9fyo by Molmil
Lacto-N-biosidase from Trueperella pyogenes
Descriptor: NICKEL (II) ION, TrpyGH20, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Vuillemin, M, Siebenhaar, S, Zeuner, B, Morth, J.P.
Deposit date:2024-07-03
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Discovery of Lacto-N-biosidases and a Novel N-Acetyllactosaminidase Activity in the CAZy Family GH20: Functional Diversity and Structural Insights.
Chembiochem, 2024
5OJL
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BU of 5ojl by Molmil
Imine Reductase from Aspergillus terreus in complex with NADPH4 and dibenz[c,e]azepine
Descriptor: 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE, 5-methyl-7~{H}-benzo[d][2]benzazepine, Imine reductase
Authors:Sharma, M, Grogan, G.
Deposit date:2017-07-21
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Biocatalytic Routes to Enantiomerically Enriched Dibenz[c,e]azepines.
Angew. Chem. Int. Ed. Engl., 56, 2017
8ZYP
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BU of 8zyp by Molmil
Cryo-EM Structure of E-4031-bound hERG Channel
Descriptor: Potassium voltage-gated channel subfamily H member 2, ~{N}-[4-[1-[2-(6-methylpyridin-2-yl)ethyl]piperidin-4-yl]carbonylphenyl]methanesulfonamide
Authors:Miyashita, Y, Moriya, T, Kato, T, Kawasaki, M, Yasuda, Y, Adachi, N, Suzuki, K, Ogasawara, S, Saito, T, Senda, T, Murata, T.
Deposit date:2024-06-18
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Improved higher resolution cryo-EM structures reveal the binding modes of hERG channel inhibitors.
Structure, 2024
9G0K
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BU of 9g0k by Molmil
CysG(N-16) in complex with SAH (metal free, cocrystallization in presence of EDTA) from Kitasatospora cystarginea
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
Authors:Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
Deposit date:2024-07-08
Release date:2024-07-17
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
9EOC
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BU of 9eoc by Molmil
Structure of the Integrator arm module containing INTS10/13/14 subunits
Descriptor: Integrator complex subunit 10, Integrator complex subunit 13, Integrator complex subunit 14, ...
Authors:Razew, M, Galej, W.P.
Deposit date:2024-03-14
Release date:2024-06-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of the Integrator complex assembly and association with transcription factors.
Mol.Cell, 84, 2024
9EV4
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BU of 9ev4 by Molmil
Pyruvate:quinone oxidoreductase (PQO) from Corynebacterium glutamicum CS176
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (Cytochrome), ...
Authors:Da Silva Lameira, C, Muenssinger, S, Yang, L, Eikmanns, B.J, Bellinzoni, M.
Deposit date:2024-03-28
Release date:2024-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.474 Å)
Cite:Corynebacterium glutamicum pyruvate:quinone oxidoreductase: an enigmatic metabolic enzyme with unusual structural features.
Febs J., 291, 2024
9FA7
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BU of 9fa7 by Molmil
Structure of the Integrator arm module containing subunits INTS10/13/14/15 (state 3)
Descriptor: Integrator complex subunit 10, Integrator complex subunit 13, Integrator complex subunit 14, ...
Authors:Razew, M, Galej, W.P.
Deposit date:2024-05-10
Release date:2024-06-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of the Integrator complex assembly and association with transcription factors.
Mol.Cell, 84, 2024
9FCX
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BU of 9fcx by Molmil
CysG(N-16)-H121N mutant in complex with SAH from Kitasatospora cystarginea
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
Authors:Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
Deposit date:2024-05-16
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
9C1U
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BU of 9c1u by Molmil
Cryo-EM Structure of a Tm1C Fibril
Descriptor: Tropomyosin 1 I/C
Authors:Fonda, B.D, Kato, M, Li, Y, Murray, D.T.
Deposit date:2024-05-29
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Cryo-EM and solid state NMR together provide a more comprehensive structural investigation of protein fibrils.
Protein Sci., 33, 2024
9BLN
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BU of 9bln by Molmil
The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex
Descriptor: 40S ribosomal protein S14, ACETIC ACID, Eukaryotic initiation factor 4A-I, ...
Authors:Brito Querido, J, Sokabe, M, Diaz-Lopez, I, Gordiyenko, Y, Zuber, P, Yifei, D, Albacete-Albacete, L, Ramakrishnan, V, S Fraser, C.
Deposit date:2024-04-30
Release date:2024-09-04
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Human tumor suppressor protein Pdcd4 binds at the mRNA entry channel in the 40S small ribosomal subunit.
Nat Commun, 15, 2024
9CP9
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BU of 9cp9 by Molmil
Crystal structure of DHPS-3-dehydrogenase, HpsN H319A variant from Cupriavidus pinatubonensis in complex with substrate (R-DHPS) and NADH
Descriptor: (2R)-2,3-dihydroxypropane-1-sulfonic acid, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Lee, M.
Deposit date:2024-07-18
Release date:2024-09-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.013 Å)
Cite:Structural and kinetic insights into the stereospecific oxidation of R -2,3-dihydroxypropanesulfonate by DHPS-3-dehydrogenase from Cupriavidus pinatubonensis.
Chem Sci, 15, 2024
6WX9
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BU of 6wx9 by Molmil
SOX2 bound to Importin-alpha 5
Descriptor: Importin subunit alpha-5, Transcription factor SOX-2
Authors:Bikshapathi, J, Stewart, M, Forwood, J.K, Aragao, D, Roman, N.
Deposit date:2020-05-10
Release date:2020-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for nuclear import selectivity of pioneer transcription factor SOX2.
Nat Commun, 12, 2021
9GSS
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BU of 9gss by Molmil
HUMAN GLUTATHIONE S-TRANSFERASE P1-1, COMPLEX WITH S-HEXYL GLUTATHIONE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE P1-1, S-HEXYLGLUTATHIONE, ...
Authors:Oakley, A, Parker, M.
Deposit date:1997-08-14
Release date:1998-09-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The structures of human glutathione transferase P1-1 in complex with glutathione and various inhibitors at high resolution.
J.Mol.Biol., 274, 1997
9CGM
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BU of 9cgm by Molmil
The Structure of Spiroplasma Virus 4
Descriptor: Capsid protein VP1, DNA binding protein ORF8
Authors:Mietzsch, M, McKenna, R.
Deposit date:2024-06-30
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:The Structure of Spiroplasma Virus 4 : Exploring the Capsid Diversity of the Microviridae.
Viruses, 16, 2024

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