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PDB: 51689 results

1JPZ
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BU of 1jpz by Molmil
Crystal structure of a complex of the heme domain of P450BM-3 with N-Palmitoylglycine
Descriptor: BIFUNCTIONAL P-450:NADPH-P450 REDUCTASE, N-PALMITOYLGLYCINE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Haines, D.C, Tomchick, D.R, Machius, M, Peterson, J.A.
Deposit date:2001-08-03
Release date:2001-11-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Pivotal role of water in the mechanism of P450BM-3.
Biochemistry, 40, 2001
4MGA
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BU of 4mga by Molmil
Crystal structure of hERa-LBD (Y537S) in complex with 4-tert-octylphenol
Descriptor: 4-(2,4,4-trimethylpentan-2-yl)phenol, Estrogen receptor, Nuclear receptor coactivator 1
Authors:Delfosse, V, Grimaldi, M, Bourguet, W.
Deposit date:2013-08-28
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional profiling of environmental ligands for estrogen receptors.
Environ.Health Perspect., 122, 2014
2M64
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BU of 2m64 by Molmil
1H, 13C and 15N Chemical Shift Assignments for Phl p 5a
Descriptor: Phlp5
Authors:Goebl, C, Focke, M, Schrank, E, Madl, T, Kosol, S, Madritsch, C, Flicker, S, Valenta, R, Zangger, K, Tjandra, N.
Deposit date:2013-03-21
Release date:2014-03-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Flexible IgE epitope-containing domains of Phl p 5 cause high allergenic activity.
J. Allergy Clin. Immunol., 140, 2017
6IZ1
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BU of 6iz1 by Molmil
Crystal Structure Analysis of a Eukaryotic Membrane Protein
Descriptor: CALCIUM ION, CHLORIDE ION, Trimeric intracellular cation channel type A
Authors:Wang, X.H, Zeng, Y, Gao, F, Su, M, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
4MHB
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BU of 4mhb by Molmil
Structure of a putative reductase from Yersinia pestis
Descriptor: Putative aldo/keto reductase, SULFATE ION
Authors:Anderson, S.M, Wawrzak, Z, Kudritska, M, Kwon, K, Rembert, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-29
Release date:2013-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a putative reductase from Yersinia pestis
To be Published
3O74
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BU of 3o74 by Molmil
Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida
Descriptor: Fructose transport system repressor FruR, GLYCEROL
Authors:Chavarria, M, Santiago, C, Platero, R, Krell, T, Casasnovas, J.M, de Lorenzo, V.
Deposit date:2010-07-30
Release date:2011-01-12
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
J.Biol.Chem., 286, 2011
7Z8Z
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BU of 7z8z by Molmil
Crystal structure of the MEILB2-BRME1 2:2 core complex
Descriptor: Break repair meiotic recombinase recruitment factor 1, Heat shock factor 2-binding protein
Authors:Gurusaran, M, Davies, O.R.
Deposit date:2022-03-19
Release date:2023-09-20
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:MEILB2-BRME1 forms a V-shaped DNA clamp upon BRCA2-binding in meiotic recombination.
Nat Commun, 15, 2024
6J7A
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BU of 6j7a by Molmil
Fusion protein of heme oxygenase-1 and NADPH cytochrome P450 reductase (17aa)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Heme oxygenase 1,NADPH--cytochrome P450 reductase, ...
Authors:Sugishima, M, Sato, H, Wada, K, Yamamoto, K.
Deposit date:2019-01-17
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.269 Å)
Cite:Crystal structure of a NADPH-cytochrome P450 oxidoreductase (CYPOR) and heme oxygenase 1 fusion protein implies a conformational change in CYPOR upon NADPH/NADP+binding.
Febs Lett., 593, 2019
4MH5
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BU of 4mh5 by Molmil
Crystal structure of the kainate receptor GluK3 ligand binding domain in complex with (S)-glutamate
Descriptor: CHLORIDE ION, GLUTAMIC ACID, GLYCEROL, ...
Authors:Venskutonyte, R, Frydenvang, K, Gajhede, M, Kastrup, J.S.
Deposit date:2013-08-29
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Binding site and interlobe interactions of the ionotropic glutamate receptor GluK3 ligand binding domain revealed by high resolution crystal structure in complex with (S)-glutamate.
J.Struct.Biol., 176, 2011
6EWL
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BU of 6ewl by Molmil
Danio rerio CEP120 first C2 domain (C2A)
Descriptor: Centrosomal protein 120
Authors:van Breugel, M, al-Jassar, C.
Deposit date:2017-11-04
Release date:2018-05-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Disease-Associated Mutations in CEP120 Destabilize the Protein and Impair Ciliogenesis.
Cell Rep, 23, 2018
2BYG
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BU of 2byg by Molmil
2nd PDZ Domain of Discs Large Homologue 2
Descriptor: CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110
Authors:Elkins, J.M, Schoch, G.A, Smee, C.E.A, Berridge, G, Salah, E, Sundstrom, M, Edwards, A, Arrowsmith, C, Weigelt, J, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2005-08-01
Release date:2005-08-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of Pick1 and Other Pdz Domains Obtained with the Help of Self-Binding C-Terminal Extensions.
Protein Sci., 16, 2007
7Z8Y
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BU of 7z8y by Molmil
Crystal structure of the SUN1-KASH6 9:6 complex
Descriptor: CHLORIDE ION, Inositol 1,4,5-triphosphate receptor associated 2, POTASSIUM ION, ...
Authors:Gurusaran, M, Davies, O.R.
Deposit date:2022-03-19
Release date:2023-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:The crystal structure of SUN1-KASH6 reveals an asymmetric LINC complex architecture compatible with nuclear membrane insertion.
Commun Biol, 7, 2024
2MAS
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BU of 2mas by Molmil
PURINE NUCLEOSIDE HYDROLASE WITH A TRANSITION STATE INHIBITOR
Descriptor: 2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL, CALCIUM ION, INOSINE-URIDINE NUCLEOSIDE N-RIBOHYDROLASE
Authors:Degano, M, Schramm, V.L, Sacchettini, J.C.
Deposit date:1996-10-17
Release date:1997-08-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Trypanosomal nucleoside hydrolase. A novel mechanism from the structure with a transition-state inhibitor.
Biochemistry, 37, 1998
4LSA
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BU of 4lsa by Molmil
Crystal structure of BRI1 sud1 (Gly643Glu) bound to brassinolide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinolide, Protein BRASSINOSTEROID INSENSITIVE 1, ...
Authors:Santiago, J, Henzler, C, Hothorn, M.
Deposit date:2013-07-22
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases.
Science, 341, 2013
3NST
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BU of 3nst by Molmil
Crystal Structure of Salicylate 1,2-dioxygenase G106A mutant from Pseudoaminobacter salicylatoxidans
Descriptor: FE (II) ION, GLYCEROL, Gentisate 1,2-dioxygenase
Authors:Ferraroni, M, Briganti, F, Matera, I.
Deposit date:2010-07-02
Release date:2011-07-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The salicylate 1,2-dioxygenase as a model for a conventional gentisate 1,2-dioxygenase: crystal structures of the G106A mutant and its adducts with gentisate and salicylate.
FEBS J., 280, 2013
5CKR
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BU of 5ckr by Molmil
Crystal Structure of MraY in complex with Muraymycin D2
Descriptor: Muraymycin D2, Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Lee, S.Y, Chung, B.C, Mashalidis, E.H, Tanino, T, Kim, M, Hong, J, Ichikawa, S.
Deposit date:2015-07-15
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural insights into inhibition of lipid I production in bacterial cell wall synthesis.
Nature, 533, 2016
6JBE
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BU of 6jbe by Molmil
Crystal structure of ABC transporter alpha-glycoside-binding mutant protein W287A in complex with glucose
Descriptor: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ...
Authors:Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
Deposit date:2019-01-25
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
6JCI
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BU of 6jci by Molmil
Crystal structure of Prolyl Endopeptidase from Haliotis discus hannai with SUAM-14746
Descriptor: 1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-one, GLYCEROL, Prolyl endopeptidase
Authors:Li, W, Cao, M.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:Crystal structure of Haliotis discus hannai Prolyl Endopeptidase
To Be Published
2C2N
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BU of 2c2n by Molmil
Structure of human mitochondrial malonyltransferase
Descriptor: 1,2-DIMETHOXYETHANE, 2-(2-ETHOXYETHOXY)ETHANOL, 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, ...
Authors:Wu, X, Bunkoczi, G, Smee, C, Arrowsmith, C, Sundstrom, M, Weigelt, J, Edwards, A, von Delft, F, Oppermann, U.
Deposit date:2005-09-29
Release date:2006-01-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Basis for Different Specificities of Acyltransferases Associated with the Human Cytosolic and Mitochondrial Fatty Acid Synthases.
Chem.Biol., 16, 2009
5COP
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BU of 5cop by Molmil
X-ray crystal structure of wild type HIV-1 protease in complex with GRL-097
Descriptor: (3R,3aS,4S,7aS)-3-hydroxyhexahydro-4H-furo[2,3-b]pyran-4-yl [(2S,3R)-4-{[(4-aminophenyl)sulfonyl](2-methylpropyl)amino}-3-hydroxy-1-(4-methoxyphenyl)butan-2-yl]carbamate, HIV-1 protease
Authors:Yedidi, R.S, Hayashi, H, Aoki, M, Das, D, Ghosh, A.K, Mitsuya, H.
Deposit date:2015-07-20
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:C-5-Modified Tetrahydropyrano-Tetrahydofuran-Derived Protease Inhibitors (PIs) Exert Potent Inhibition of the Replication of HIV-1 Variants Highly Resistant to Various PIs, including Darunavir.
J.Virol., 90, 2015
1JWR
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BU of 1jwr by Molmil
Crystal structure of human lysozyme at 100 K
Descriptor: lysozyme
Authors:Higo, J, Nakasako, M.
Deposit date:2001-09-05
Release date:2001-09-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hydration structure of human lysozyme investigated by molecular dynamics simulation and cryogenic X-ray crystal structure analyses: on the correlation between crystal water sites, solvent density, and solvent dipole
J.Comput.Chem., 23, 2002
5COW
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BU of 5cow by Molmil
C. remanei PGL-1 Dimerization Domain
Descriptor: 1,2-ETHANEDIOL, Putative uncharacterized protein, SULFATE ION
Authors:Aoki, S.T, Bingman, C.A, Wickens, M, Kimble, J.E.
Deposit date:2015-07-20
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:PGL germ granule assembly protein is a base-specific, single-stranded RNase.
Proc.Natl.Acad.Sci.USA, 113, 2016
6F0Z
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BU of 6f0z by Molmil
GLIC mutant D88N
Descriptor: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
Authors:Hu, H.D, Delarue, M.
Deposit date:2017-11-21
Release date:2018-01-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Full mutational mapping of titratable residues helps to identify proton-sensors involved in the control of channel gating in the Gloeobacter violaceus pentameric ligand-gated ion channel.
PLoS Biol., 15, 2017
1JYQ
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BU of 1jyq by Molmil
Xray Structure of Grb2 SH2 Domain Complexed with a Highly Affine Phospho Peptide
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2, mAZ-pY-(alpha Me)pY-N-NH2 peptide inhibitor
Authors:Nioche, P, Liu, W.-Q, Broutin, I, Charbonnier, F, Latreille, M.-T, Vidal, M, Roques, B, Garbay, C, Ducruix, A.
Deposit date:2001-09-13
Release date:2002-03-13
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the SH2 domain of Grb2: highlight on the binding of a new high-affinity inhibitor.
J.Mol.Biol., 315, 2002
6FFZ
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BU of 6ffz by Molmil
Crystal structure of R. ruber ADH-A, mutant F43H, Y54L
Descriptor: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Dobritzsch, D, Maurer, D, Hamnevik, E, Enugala, T.R, Widersten, M.
Deposit date:2018-01-09
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Directed Evolution of Alcohol Dehydrogenase for Improved Stereoselective Redox Transformations of 1-Phenylethane-1,2-diol and Its Corresponding Acyloin.
Biochemistry, 57, 2018

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