Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 83 results

4Y2E
DownloadVisualize
BU of 4y2e by Molmil
Crystal structure of the catalytic domain of human dual-specificity phosphatase 7 (C232S)
Descriptor: Dual specificity protein phosphatase 7, PHOSPHATE ION
Authors:Lountos, G.T, Austin, B.P, Tropea, J.E, Waugh, D.S.
Deposit date:2015-02-09
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure of human dual-specificity phosphatase 7, a potential cancer drug target.
Acta Crystallogr.,Sect.F, 71, 2015
7UFY
DownloadVisualize
BU of 7ufy by Molmil
Crystal structure of TDP1 complexed with compound XZ766
Descriptor: 1,2-ETHANEDIOL, Tyrosyl-DNA phosphodiesterase 1, [(4-{[(4S)-2,7-diphenylimidazo[1,2-a]pyridin-3-yl]amino}phenyl)methyl]phosphonic acid
Authors:Lountos, G.T, Zhao, X.Z, Wang, W, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
Deposit date:2022-03-23
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.584 Å)
Cite:Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1.
Front Chem, 10, 2022
7UFZ
DownloadVisualize
BU of 7ufz by Molmil
Crystal structure of TDP1 complexed with compound XZ768
Descriptor: (4-{[(4S)-2-phenylimidazo[1,2-a]pyridin-3-yl]amino}phenyl)phosphonic acid, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Lountos, G.T, Zhao, X.Z, Wang, W, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
Deposit date:2022-03-23
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.559 Å)
Cite:Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1.
Front Chem, 10, 2022
7UPZ
DownloadVisualize
BU of 7upz by Molmil
Structural basis for cell type specific DNA binding of C/EBPbeta: the case of cell cycle inhibitor p15INK4b promoter
Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(*AP*TP*TP*CP*TP*TP*AP*AP*GP*AP*AP*AP*GP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*CP*TP*TP*TP*CP*TP*TP*AP*AP*GP*AP*A)-3')
Authors:Lountos, G.T, Cherry, S, Tropea, J.E, Wlodawer, A, Miller, M.
Deposit date:2022-04-18
Release date:2022-11-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural basis for cell type specific DNA binding of C/EBP beta : The case of cell cycle inhibitor p15INK4b promoter.
J.Struct.Biol., 214, 2022
4A0E
DownloadVisualize
BU of 4a0e by Molmil
Crystal structure of the cytoplasmic N-terminal domain of Yersinia pestis YscD
Descriptor: TYPE III SECRETION PROTEIN
Authors:Lountos, G.T, Tropea, J.E, Waugh, D.S.
Deposit date:2011-09-08
Release date:2012-02-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:Structure of the Cytoplasmic Domain of Yersinia Pestis Yscd, an Essential Component of the Type III Secretion System
Acta Crystallogr.,Sect.D, 68, 2012
4AZ1
DownloadVisualize
BU of 4az1 by Molmil
Crystal structure of the Trypanosoma cruzi protein tyrosine phosphatase TcPTP1, a potential therapeutic target for Chagas' disease
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, TYROSINE SPECIFIC PROTEIN PHOSPHATASE
Authors:Lountos, G.T, Tropea, J.E, Waugh, D.S.
Deposit date:2012-06-22
Release date:2012-11-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.181 Å)
Cite:Structure of the Trypanosoma Cruzi Protein Tyrosine Phosphatase Tcptp1, a Potential Therapeutic Target for Chagas' Disease.
Mol.Biochem.Parasitol., 187, 2012
8DHI
DownloadVisualize
BU of 8dhi by Molmil
Crystal Structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 8.5
Descriptor: TYR_PHOSPHATASE_2 domain-containing protein
Authors:Lountos, G.T, Tropea, J.E.
Deposit date:2022-06-27
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.588 Å)
Cite:Crystal Structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 8.5
To Be Published
8DHJ
DownloadVisualize
BU of 8dhj by Molmil
Crystal structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 7.5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, TYR_PHOSPHATASE_2 domain-containing protein
Authors:Lountos, G.T, Tropea, J.E.
Deposit date:2022-06-27
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:Crystal structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 7.5
To Be Published
8CW2
DownloadVisualize
BU of 8cw2 by Molmil
Crystal structure of TDP1 complexed with compound XZ760
Descriptor: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-({(4R)-7-phenyl-2-[4-(2-{[4-(pyridin-2-yl)phenyl]methoxy}ethyl)phenyl]imidazo[1,2-a]pyridin-3-yl}amino)benzene-1,2-dicarboxylic acid, ...
Authors:Lountos, G.T, Zhao, X.Z, Wang, W, Kiselev, E, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
Deposit date:2022-05-18
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.811 Å)
Cite:Identification of multidentate tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors that simultaneously access the DNA, protein and catalytic-binding sites by oxime diversification.
Rsc Chem Biol, 4, 2023
8CVQ
DownloadVisualize
BU of 8cvq by Molmil
Crystal structure of TDP1 complexed with compound XZ761
Descriptor: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-{[(4S)-2,7-diphenylimidazo[1,2-a]pyridin-3-yl]amino}benzene-1,2-dicarboxylic acid, ...
Authors:Lountos, G.T, Zhao, X.Z, Wang, W, Kiselev, E, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
Deposit date:2022-05-18
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of multidentate tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors that simultaneously access the DNA, protein and catalytic-binding sites by oxime diversification.
Rsc Chem Biol, 4, 2023
8DUF
DownloadVisualize
BU of 8duf by Molmil
Crystal structure of Venezuelan Equine Encephalitis alphavirus (VEEV) nonstructural protein 2 (nsp2) (K741A/K767A) protease domain
Descriptor: nsp2 protease domain
Authors:Lountos, G.T.
Deposit date:2022-07-27
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Self-inhibited State of Venezuelan Equine Encephalitis Virus (VEEV) nsP2 Cysteine Protease: A Crystallographic and Molecular Dynamics Analysis.
J.Mol.Biol., 435, 2023
6XBC
DownloadVisualize
BU of 6xbc by Molmil
Crystal structure of Streptomyces sviceus SsDesB
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Monooxigenase
Authors:Lountos, G.T, Giddings, L.A, Waugh, D.S.
Deposit date:2020-06-05
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.863 Å)
Cite:Characterization of a broadly specific cadaverine N-hydroxylase involved in desferrioxamine B biosynthesis in Streptomyces sviceus.
Plos One, 16, 2021
6XBB
DownloadVisualize
BU of 6xbb by Molmil
Crystal structure of Streptomyces sviceus SsDesB in complex with NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Monooxigenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Lountos, G.T, Giddings, L.A, Waugh, D.S.
Deposit date:2020-06-05
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.366 Å)
Cite:Characterization of a broadly specific cadaverine N-hydroxylase involved in desferrioxamine B biosynthesis in Streptomyces sviceus.
Plos One, 16, 2021
2BF3
DownloadVisualize
BU of 2bf3 by Molmil
Crystal structure of a toluene 4-monooxygenase catalytic effector protein variant missing ten N-terminal residues (delta-N10 T4moD)
Descriptor: HEPTANE-1,2,3-TRIOL, TOLUENE-4-MONOOXYGENASE SYSTEM PROTEIN D
Authors:Lountos, G.T, Mitchell, K.H, Studts, J.M, Fox, B.G, Orville, A.M.
Deposit date:2004-12-03
Release date:2005-05-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structures and Functional Studies of T4Mod, the Toluene 4-Monooxygenase Catalytic Effector Protein
Biochemistry, 44, 2005
2BF5
DownloadVisualize
BU of 2bf5 by Molmil
Crystal structure of a toluene 4-monooxygenase catalytic effector protein variant missing four N-terminal residues (delta-N4 T4moD)
Descriptor: TOLUENE-4-MONOOXYGENASE SYSTEM PROTEIN D
Authors:Lountos, G.T, Mitchell, K.H, Studts, J.M, Fox, B.G, Orville, A.M.
Deposit date:2004-12-03
Release date:2005-05-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal Structures and Functional Studies of T4Mod, the Toluene 4-Monooxygenase Catalytic Effector Protein
Biochemistry, 44, 2005
4WME
DownloadVisualize
BU of 4wme by Molmil
Crystal structure of catalytically inactive MERS-CoV 3CL Protease (C148A) in spacegroup C2
Descriptor: 1,2-ETHANEDIOL, MERS-CoV 3CL protease
Authors:Lountos, G.T, Needle, D, Waugh, D.S.
Deposit date:2014-10-08
Release date:2015-05-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the Middle East respiratory syndrome coronavirus 3C-like protease reveal insights into substrate specificity.
Acta Crystallogr.,Sect.D, 71, 2015
4WMF
DownloadVisualize
BU of 4wmf by Molmil
Crystal structure of catalytically inactive MERS-CoV 3CL protease (C148A) in spacegroup P212121
Descriptor: DI(HYDROXYETHYL)ETHER, MERS-CoV 3CL protease, TETRAETHYLENE GLYCOL
Authors:Lountos, G.T, Needle, D, Waugh, D.S.
Deposit date:2014-10-08
Release date:2015-05-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of the Middle East respiratory syndrome coronavirus 3C-like protease reveal insights into substrate specificity.
Acta Crystallogr.,Sect.D, 71, 2015
4WMD
DownloadVisualize
BU of 4wmd by Molmil
Crystal structure of catalytically inactive MERS-CoV 3CL protease (C148A) in spacegroup C2221
Descriptor: DI(HYDROXYETHYL)ETHER, ORF1a, PENTAETHYLENE GLYCOL, ...
Authors:Lountos, G.T, Needle, D, Waugh, D.S.
Deposit date:2014-10-08
Release date:2015-05-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.585 Å)
Cite:Structures of the Middle East respiratory syndrome coronavirus 3C-like protease reveal insights into substrate specificity.
Acta Crystallogr.,Sect.D, 71, 2015
4WOH
DownloadVisualize
BU of 4woh by Molmil
Structure of of human dual-specificity phosphatase 22 (E24A/K28A/K30A/C88S) complexed with 4-nitrophenolphosphate
Descriptor: 1,2-ETHANEDIOL, 4-NITROPHENYL PHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Lountos, G.T, Cherry, S, Tropea, J.E, Waugh, D.S.
Deposit date:2014-10-15
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural analysis of human dual-specificity phosphatase 22 complexed with a phosphotyrosine-like substrate.
Acta Crystallogr.,Sect.F, 71, 2015
2BF2
DownloadVisualize
BU of 2bf2 by Molmil
Crystal structure of native toluene-4-monooxygenase catalytic effector protein, T4moD
Descriptor: TOLUENE-4-MONOOXYGENASE SYSTEM PROTEIN D
Authors:Lountos, G.T, Mitchell, K.H, Studts, J.M, Fox, B.G, Orville, A.M.
Deposit date:2004-12-03
Release date:2005-05-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures and Functional Studies of T4Mod, the Toluene 4-Monooxygenase Catalytic Effector Protein
Biochemistry, 44, 2005
2CDU
DownloadVisualize
BU of 2cdu by Molmil
The Crystal Structure of Water-forming NAD(P)H Oxidase from Lactobacillus sanfranciscensis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH OXIDASE
Authors:Lountos, G.T, Jiang, R, Wellborn, W.B, Thaler, T.L, Bommarius, A.S, Orville, A.M.
Deposit date:2006-01-28
Release date:2006-07-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of Nad(P)H Oxidase from Lactobacillus Sanfranciscensis: Insights Into the Conversion of O(2) Into Two Water Molecules by the Flavoenzyme.
Biochemistry, 45, 2006
2W0J
DownloadVisualize
BU of 2w0j by Molmil
Crystal structure of Chk2 in complex with NSC 109555, a specific inhibitor
Descriptor: 4,4'-DIACETYLDIPHENYLUREA-BIS(GUANYLHYDRAZONE), NITRATE ION, SERINE/THREONINE-PROTEIN KINASE CHK2
Authors:Lountos, G.T, Tropea, J.E, Zhang, D, Jobson, A.G, Pommier, Y, Shoemaker, R.H, Waugh, D.S.
Deposit date:2008-08-18
Release date:2009-02-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Checkpoint Kinase 2 in Complex with Nsc 109555, a Potent and Selective Inhibitor
Protein Sci., 18, 2009
2WGP
DownloadVisualize
BU of 2wgp by Molmil
Crystal structure of human dual specificity phosphatase 14
Descriptor: DUAL SPECIFICITY PROTEIN PHOSPHATASE 14, PHOSPHATE ION
Authors:Lountos, G.T, Tropea, J.E, Cherry, S, Waugh, D.S.
Deposit date:2009-04-22
Release date:2009-10-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Overproduction, Purification and Structure Determination of Human Dual-Specificity Phosphatase 14.
Acta Crystallogr.,Sect.D, 65, 2009
6W4R
DownloadVisualize
BU of 6w4r by Molmil
Structure of Tdp1 catalytic domain in complex with inhibitor XZ633p
Descriptor: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-{[2-(2-hydroxyphenyl)imidazo[1,2-a]pyrazin-3-yl]amino}benzene-1,2-dicarboxylic acid, ...
Authors:Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R, Waugh, D.S.
Deposit date:2020-03-11
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.819 Å)
Cite:Tdp1 catalytic domain
To Be Published
6W7L
DownloadVisualize
BU of 6w7l by Molmil
Structure of Tdp1 catalytic domain in complex with inhibitor XZ632p
Descriptor: 1,2-ETHANEDIOL, 4-[(2-phenylimidazo[1,2-a]pyrazin-3-yl)amino]benzene-1,2-dicarboxylic acid, Tyrosyl-DNA phosphodiesterase 1
Authors:Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R, Waugh, D.S.
Deposit date:2020-03-19
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Small molecule microarray identifies inhibitors of tyrosyl-DNA phosphodiesterase 1 that simultaneously access the catalytic pocket and two substrate binding sites
Chemical Science, 12, 2021

 

1234>

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon