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PDB: 458 件
4OFE
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BU of 4ofe by Molmil
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding domain protein 4: Implications for roles of Arg468 in mismatch recognition and catalysis
分子名称: 12-mer DNA(G), 12-mer DNA(T), MAGNESIUM ION, ...
著者Ouzon-Shubeita, H, Lin, Y.-L, Lee, S.
登録日2014-01-14
公開日2015-04-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of R468K/D560N MBD4 bound to G:T mispair DNA
To be Published
2N2U
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BU of 2n2u by Molmil
Solution NMR Structure of DE NOVO DESIGNED Ferredoxin Fold PROTEIN sfr3, Northeast Structural Genomics Consortium (NESG) Target OR358
分子名称: OR358
著者Liu, G, Lin, Y, Koga, N, Koga, R, Xiao, R, Janjua, H, Hamilton, K, Pederson, K, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2015-05-14
公開日2015-09-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of DE NOVO DESIGNED Ferredoxin Fold PROTEIN sfr3, Northeast Structural Genomics Consortium (NESG) Target OR358
To be Published
4RGJ
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BU of 4rgj by Molmil
Apo crystal structure of CDPK4 from Plasmodium falciparum, PF3D7_0717500
分子名称: Calcium-dependent protein kinase 4
著者Wernimont, A.K, Walker, J.R, Hutchinson, A, Seitova, A, He, H, Loppnau, P, Neculai, M, Amani, M, Lin, Y.H, Ravichandran, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Lovato, D.V, Structural Genomics Consortium (SGC)
登録日2014-09-30
公開日2014-10-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Apo crystal structure of CDPK4 from Plasmodium falciparum, PF3D7_0717500
To be Published
4RJV
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BU of 4rjv by Molmil
Crystal Structure of a De Novo Designed Ferredoxin Fold, Northeast Structural Genomics Consortium (NESG) Target OR461
分子名称: OR461
著者O'Connell, P.T, Lin, Y.-R, Guan, R, Koga, N, Koga, R, Seetharaman, J, Janjua, H, Xiao, R, Maglaqui, M, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2014-10-09
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.523 Å)
主引用文献Northeast Structural Genomics Consortium Target OR461
To be published
7EW8
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BU of 7ew8 by Molmil
Legionella pneumophila effector AnkD
分子名称: ANK_REP_REGION domain-containing protein
著者Chen, T.T, Lin, Y.L.
登録日2021-05-24
公開日2022-06-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献Atypical Legionella GTPase effector hijacks host vesicular transport factor p115 to regulate host lipid droplet.
Sci Adv, 8, 2022
1DSX
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BU of 1dsx by Molmil
KV1.2 T1 DOMAIN, RESIDUES 33-119, T46V MUTANT
分子名称: PROTEIN (KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL)
著者Minor Jr, D.L, Lin, Y.-F, Mobley, B.C, Avelar, A, Jan, Y.N, Jan, L.Y, Berger, J.M.
登録日2000-01-10
公開日2000-09-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The polar T1 interface is linked to conformational changes that open the voltage-gated potassium channel.
Cell(Cambridge,Mass.), 102, 2000
2DSX
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BU of 2dsx by Molmil
Crystal structure of rubredoxin from Desulfovibrio gigas to ultra-high 0.68 A resolution
分子名称: FE (III) ION, Rubredoxin
著者Chen, C.-J, Lin, Y.-H, Huang, Y.-C, Liu, M.-Y.
登録日2006-07-07
公開日2006-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (0.68 Å)
主引用文献Crystal structure of rubredoxin from Desulfovibrio gigas to ultra-high 0.68A resolution
Biochem.Biophys.Res.Commun., 349, 2006
7CEZ
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BU of 7cez by Molmil
An x-ray structure of G5K/Q8K/A19K/V21K Mb mutant with a positive charge
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Yuan, H, Lin, Y.W.
登録日2020-06-24
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献An x-ray structure of G5K/Q8K/A19K/V21K Mb mutant with a positive charge
To Be Published
7CEN
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BU of 7cen by Molmil
an x-ray structure of ferric L29E Mb in complex with Mg(II)
分子名称: MAGNESIUM ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Yuan, H, Lin, Y.W.
登録日2020-06-23
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献an x-ray structure of ferric L29E Mb in complex with Mg(II)
To Be Published
3KG1
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BU of 3kg1 by Molmil
Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, mutant N63A
分子名称: CHLORIDE ION, SnoaB
著者Koskiniemi, H, Grocholski, T, Lindqvist, Y, Mantsala, P, Niemi, J, Schneider, G.
登録日2009-10-28
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism
Biochemistry, 49, 2010
3KG0
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Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.7 resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SnoaB
著者Koskiniemi, H, Grocholski, T, Lindqvist, Y, Mantsala, P, Niemi, J, Schneider, G.
登録日2009-10-28
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism
Biochemistry, 49, 2010
3EOZ
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BU of 3eoz by Molmil
Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w
分子名称: GLYCEROL, PHOSPHATE ION, putative Phosphoglycerate mutase
著者Wernimont, A.K, Tempel, W, Lam, A, Zhao, Y, Lew, J, Lin, Y.H, Wasney, G, Vedadi, M, Kozieradzki, I, Cossar, D, Schapira, M, Weigelt, J, Arrowsmith, C.H, Bochkarev, A, Edwards, A.M, Hui, R, Pizarro, J, Hills, T, Structural Genomics Consortium (SGC)
登録日2008-09-29
公開日2008-11-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Characterization of a new phosphatase from Plasmodium.
Mol.Biochem.Parasitol., 179, 2011
7F07
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BU of 7f07 by Molmil
Autonomous VH domain that interacts with eIF4E at the Capped mRNA Binding site.
分子名称: Eukaryotic translation initiation factor 4E, VH domain (VH-DiFCAP-01)
著者Brown, C.J, Frosi, Y, Ng, S, Lin, Y.C.
登録日2021-06-03
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Development of a novel peptide aptamer that interacts with the eIF4E capped-mRNA binding site using peptide epitope linker evolution (PELE).
Rsc Chem Biol, 3, 2022
2D9S
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BU of 2d9s by Molmil
Solution structure of RSGI RUH-049, a UBA domain from mouse cDNA
分子名称: CBL E3 ubiquitin protein ligase
著者Hamada, T, Hirota, H, Lin, Y.-J, Guntert, P, Kurosaki, C, Izumi, K, Yoshida, M, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-13
公開日2007-01-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RSGI RUH-049, a UBA domain from mouse cDNA
To be Published
1DUJ
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BU of 1duj by Molmil
SOLUTION STRUCTURE OF THE SPINDLE ASSEMBLY CHECKPOINT PROTEIN HUMAN MAD2
分子名称: SPINDLE ASSEMBLY CHECKPOINT PROTEIN
著者Luo, X, Fang, G, Coldiron, M, Lin, Y, Yu, H.
登録日2000-01-17
公開日2000-03-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the Mad2 spindle assembly checkpoint protein and its interaction with Cdc20.
Nat.Struct.Biol., 7, 2000
7XM8
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BU of 7xm8 by Molmil
Glucagon amyloid fibril
分子名称: Glucagon
著者Jeong, H, Lin, Y, Lee, Y.-H.
登録日2022-04-25
公開日2023-04-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Atomistic zipper-like amyloid structure of full-length glucagon
To Be Published
2DO6
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BU of 2do6 by Molmil
Solution structure of RSGI RUH-065, a UBA domain from human cDNA
分子名称: E3 ubiquitin-protein ligase CBL-B
著者Hamada, T, Hirota, H, Lin, Y.-J, Guntert, P, Sato, M, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-27
公開日2007-05-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RSGI RUH-065, a UBA domain from human cDNA
To be Published
3DZO
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BU of 3dzo by Molmil
Crystal structure of a rhoptry kinase from toxoplasma gondii
分子名称: MAGNESIUM ION, Rhoptry kinase domain
著者Wernimont, A.K, Lam, A, Ali, A, Lin, Y.H, Ni, S, Ravichandran, M, Wasney, G, Vedadi, M, Kozieradzki, I, Schapira, M, Bochkarev, A, Wilkstrom, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Sibley, D, Hui, R, Qiu, W, Structural Genomics Consortium (SGC)
登録日2008-07-30
公開日2008-09-16
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel structural and regulatory features of rhoptry secretory kinases in Toxoplasma gondii.
Embo J., 28, 2009
2DUW
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BU of 2duw by Molmil
Solution structure of putative CoA-binding protein of Klebsiella pneumoniae
分子名称: putative CoA-binding protein
著者Hung, K.W, Lin, Y.C, Cheng, C.C, Chang, C.F, Tsai, S.F, Huang, T.H.
登録日2006-07-27
公開日2007-08-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of putative CoA-binding protein of Klebsiella pneumoniae
To be Published
4DEM
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BU of 4dem by Molmil
Crystal structure of human FPPS in complex with YS_04_70
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({4-[4-(propan-2-yloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)
著者Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
登録日2012-01-20
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Design and Synthesis of Active Site Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Apoptosis and Inhibition of ERK Phosphorylation in Multiple Myeloma Cells.
J.Med.Chem., 55, 2012
2BA3
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BU of 2ba3 by Molmil
NMR Structure of NikA N-terminal Fragment
分子名称: NikA
著者Yoshida, H, Furuya, N, Lin, Y.J, Guntert, P, Komano, T, Kainosho, M.
登録日2005-10-14
公開日2006-10-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of NikA N-teminal Fragment
To be Published
2AZ8
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BU of 2az8 by Molmil
HIV-1 Protease NL4-3 in complex with inhibitor, TL-3
分子名称: PROTEASE RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
著者Heaslet, H, Kutilek, V, Morris, G.M, Lin, Y.-C, Elder, J.H, Torbett, B.E, Stout, C.D.
登録日2005-09-09
公開日2006-02-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3
J.Mol.Biol., 356, 2006
7D8B
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BU of 7d8b by Molmil
Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways
分子名称: Eukaryotic translation initiation factor 4E, VH-S4
著者Frosi, Y, Lin, Y.C, Jiang, S, Brown, C.J.
登録日2020-10-07
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Engineering an autonomous VH domain to modulate intracellular pathways and to interrogate the eIF4F complex.
Nat Commun, 13, 2022
1QDV
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BU of 1qdv by Molmil
N-TERMINAL DOMAIN, VOLTAGE-GATED POTASSIUM CHANNEL KV1.2 RESIDUES 33-131
分子名称: KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL
著者Minor Jr, D.L, Lin, Y.-F, Mobley, B.C, Yu, M, Jan, Y.N, Jan, L.Y, Berger, J.M.
登録日1999-07-10
公開日2000-09-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The polar T1 interface is linked to conformational changes that open the voltage-gated potassium channel.
Cell(Cambridge,Mass.), 102, 2000
2AZ9
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BU of 2az9 by Molmil
HIV-1 Protease NL4-3 1X mutant
分子名称: PROTEASE RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
著者Heaslet, H, Kutilek, V, Morris, G.M, Lin, Y.-C, Elder, J.H, Torbett, B.E, Stout, C.D.
登録日2005-09-09
公開日2006-02-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3
J.Mol.Biol., 356, 2006

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