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PDB: 973 results

8Y3W
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The Cryo-EM structure of anti-phage defense associated DSR2 tetramer bound with two DSAD1 inhibitors (same side)
Descriptor: DSR anti-defence 1, SIR2-like domain-containing protein
Authors:Wang, R.W, Xu, Q, Wu, Z.X, Li, J.L, Shi, Z.B, Li, F.X.
Deposit date:2024-01-29
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:The structural basis of the activation and inhibition of DSR2 NADase by phage proteins.
Nat Commun, 15, 2024
8YKX
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BU of 8ykx by Molmil
Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid
Descriptor: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Molecular basis of ligand recognition and activation of the human succinate receptor SUCR1.
Cell Res., 34, 2024
8Y34
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Cryo-EM structure of anti-phage defense associated DSR2 (H171A) (map2)
Descriptor: SIR2-like domain-containing protein
Authors:Wang, R.W, Xu, Q, Wu, Z.X, Li, J.L, Shi, Z.B, Li, F.X.
Deposit date:2024-01-28
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:The structural basis of the activation and inhibition of DSR2 NADase by phage proteins.
Nat Commun, 15, 2024
8Y3M
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Cryo-EM structure of DSR2-DSAD1 complex (cross-linked)
Descriptor: DSR anti-defence 1, SIR2-like domain-containing protein
Authors:Wang, R.W, Xu, Q, Wu, Z.X, Li, J.L, Shi, Z.B, Li, F.X.
Deposit date:2024-01-29
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:The structural basis of the activation and inhibition of DSR2 NADase by phage proteins.
Nat Commun, 15, 2024
8Y3Y
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BU of 8y3y by Molmil
The Cryo-EM structure of anti-phage defense associated DSR2 tetramer bound with two DSAD1 inhibitors (opposite side)
Descriptor: DSR anti-defence 1, SIR2-like domain-containing protein
Authors:Wang, R.W, Xu, Q, Wu, Z.X, Li, J.L, Shi, Z.B, Li, F.X.
Deposit date:2024-01-29
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:The structural basis of the activation and inhibition of DSR2 NADase by phage proteins.
Nat Commun, 15, 2024
8ZMV
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BU of 8zmv by Molmil
Structure of a triple-helix region of human Collagen type XVII from Trautec
Descriptor: collagen type XVII
Authors:Chu, Y, Zhai, Y, Fan, X, Fu, S, Li, J, Wu, X, Cai, H, Wang, X, Li, D, Feng, P, Cao, K, Qian, S.
Deposit date:2024-05-24
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a triple-helix region of human Collagen type XVII from Trautec
To Be Published
8YKW
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BU of 8ykw by Molmil
Cryo-EM structure of succinate receptor SUCR1 bound to succinic acid
Descriptor: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Molecular basis of ligand recognition and activation of the human succinate receptor SUCR1.
Cell Res., 34, 2024
9J23
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BU of 9j23 by Molmil
Structure of a triple-helix region of human Collagen type II from Trautec
Descriptor: Triple-helix region of human collagen type II
Authors:Fan, X, Zhai, Y, Chu, Y, Fu, S, Li, D, Feng, P, Cao, K, Li, J, Si, Y, Ma, L, Qian, S.
Deposit date:2024-08-06
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a triple-helix region of human Collagen type II from Trautec
To Be Published
7X8L
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BU of 7x8l by Molmil
Microbial family VII carboxylesterase E93 Wild-type
Descriptor: Carboxylic ester hydrolase
Authors:Li, Y, Zhen, R, Li, J, Xu, X.
Deposit date:2022-03-13
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural and functional insight into a marine microbial carboxylesterase E93
To Be Published
7EGH
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BU of 7egh by Molmil
TFIID lobe C subcomplex
Descriptor: DNA (45-MER), Transcription initiation factor TFIID subunit 1, Transcription initiation factor TFIID subunit 2, ...
Authors:Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
Deposit date:2021-03-24
Release date:2021-05-12
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
5DP4
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Crystal Structure of EV71 3C Proteinase in complex with compound 3
Descriptor: 3C proteinase, ethyl (2Z,4S)-4-{[(2S)-2-methyl-3-phenylpropanoyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
Authors:Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
Deposit date:2015-09-12
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
5DP5
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Crystal Structure of EV71 3C Proteinase in complex with compound 4
Descriptor: 3C proteinase, ethyl (2Z,4S)-4-{[(2R,5S)-5-amino-2-(4-fluorobenzyl)-6-methyl-4-oxoheptanoyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
Authors:Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
Deposit date:2015-09-12
Release date:2016-03-30
Last modified:2016-04-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
5DP7
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Crystal Structure of EV71 3C Proteinase in complex with compound 5
Descriptor: 3C proteinase, ethyl (2Z,4S)-4-{[N-(3-methylbutanoyl)-L-phenylalanyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
Authors:Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
Deposit date:2015-09-12
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
8W7J
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BU of 8w7j by Molmil
Cryo-EM structure of ClassIII Lanthipeptide modification enzyme PneKC with chain A bounded to substrate PneA and GTP.
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, PneA LP, ...
Authors:Li, Y, Luo, M, Shao, K, Li, J, Li, Z.
Deposit date:2023-08-30
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Mechanistic insights into lanthipeptide modification by a distinct subclass of LanKC enzyme that forms dimers.
Nat Commun, 15, 2024
5U2U
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BU of 5u2u by Molmil
Crystal structure of the Hsp104 N-terminal domain from Saccharomyces cerevisiae
Descriptor: Heat shock protein 104
Authors:Wang, P, Li, J, Sha, B.
Deposit date:2016-11-30
Release date:2017-04-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.541 Å)
Cite:Crystal structures of Hsp104 N-terminal domains from Saccharomyces cerevisiae and Candida albicans suggest the mechanism for the function of Hsp104 in dissolving prions.
Acta Crystallogr D Struct Biol, 73, 2017
6VHH
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BU of 6vhh by Molmil
Human Teneurin-2 and human Latrophilin-3 binary complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G protein-coupled receptor L3, ...
Authors:Xie, Y, Li, J, Arac, D, Zhao, M.
Deposit date:2020-01-09
Release date:2020-06-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Alternative splicing controls teneurin-latrophilin interaction and synapse specificity by a shape-shifting mechanism.
Nat Commun, 11, 2020
5SV7
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BU of 5sv7 by Molmil
The Crystal structure of a chaperone
Descriptor: Eukaryotic translation initiation factor 2-alpha kinase 3
Authors:Wang, P, Li, J, Sha, B.
Deposit date:2016-08-04
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:The ER stress sensor PERK luminal domain functions as a molecular chaperone to interact with misfolded proteins.
Acta Crystallogr D Struct Biol, 72, 2016
5U2L
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BU of 5u2l by Molmil
Crystal structure of the Hsp104 N-terminal domain from Candida albicans
Descriptor: Heat shock protein 104
Authors:Wang, P, Li, J, Sha, B.
Deposit date:2016-11-30
Release date:2017-04-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6555 Å)
Cite:Crystal structures of Hsp104 N-terminal domains from Saccharomyces cerevisiae and Candida albicans suggest the mechanism for the function of Hsp104 in dissolving prions.
Acta Crystallogr D Struct Biol, 73, 2017
6JD5
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BU of 6jd5 by Molmil
ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ESX conserved component EccC2. ESX-2 type VII secretion system protein. Possible membrane protein, MAGNESIUM ION
Authors:Wang, S.H, Li, J, Rao, Z.H.
Deposit date:2019-01-31
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into substrate recognition by the type VII secretion system.
Protein Cell, 11, 2020
6J18
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BU of 6j18 by Molmil
ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ESX-5 secretion system protein EccC5, MAGNESIUM ION
Authors:Wang, S.H, Li, J, Rao, Z.H.
Deposit date:2018-12-28
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into substrate recognition by the type VII secretion system.
Protein Cell, 11, 2020
6J19
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BU of 6j19 by Molmil
ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ESAT-6-like protein EsxB, ESX-1 secretion system protein EccCb1, ...
Authors:Wang, S.H, Li, J, Rao, Z.H.
Deposit date:2018-12-28
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Structural insights into substrate recognition by the type VII secretion system.
Protein Cell, 11, 2020
5DP3
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BU of 5dp3 by Molmil
Crystal Structure of EV71 3C Proteinase in complex with compound 2
Descriptor: 3C proteinase, ethyl (4S)-5-[(3S)-2-oxopyrrolidin-3-yl]-4-[(3-phenylpropanoyl)amino]pent-2-enoate
Authors:Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
Deposit date:2015-09-12
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
6J17
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BU of 6j17 by Molmil
ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ESX-3 secretion system protein EccC3, MAGNESIUM ION
Authors:Wang, S.H, Li, J, Rao, Z.H.
Deposit date:2018-12-28
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.975 Å)
Cite:Structural insights into substrate recognition by the type VII secretion system.
Protein Cell, 11, 2020
5DP6
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Crystal Structure of EV71 3C Proteinase in complex with compound 7
Descriptor: 3C proteinase, ethyl (2Z,4S)-4-{[N-(3-cyclopropylpropanoyl)-L-phenylalanyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
Authors:Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
Deposit date:2015-09-12
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
5TPV
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BU of 5tpv by Molmil
X-ray structure of WlaRA (TDP-fucose-3,4-ketoisomerase) from Campylobacter jejuni
Descriptor: PHOSPHATE ION, THYMIDINE-5'-DIPHOSPHATE, WlaRA, ...
Authors:Holden, H.M, Thoden, J.B, Li, Z.A, Riegert, A.S, Goneau, M.-F, Cunningham, A.M, Vinograd, E, Schoenhofen, I.C, Gilbert, M, Li, J.
Deposit date:2016-10-21
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Characterization of the dTDP-Fuc3N and dTDP-Qui3N biosynthetic pathways in Campylobacter jejuni 81116.
Glycobiology, 27, 2017

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PDB entries from 2024-10-16

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