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PDB: 934 results

3S7Y
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BU of 3s7y by Molmil
Crystal structure of mmNAGS in Space Group P3121 at 4.3 A resolution
Descriptor: N-acetylglutamate kinase / N-acetylglutamate synthase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-27
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.3077 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3U34
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BU of 3u34 by Molmil
Crystal structure of the general stress FMN/FAD binding protein from the phytopathogen Xanthomonas citri
Descriptor: General stress protein, TRIETHYLENE GLYCOL
Authors:Hilario, E, Li, Y, Fan, L.
Deposit date:2011-10-04
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of a Xanthomonas general stress protein involved in citrus canker reveals its flavin-binding property.
Acta Crystallogr.,Sect.D, 68, 2012
4IJ8
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BU of 4ij8 by Molmil
Crystal structure of the complex of SETD8 with SAM
Descriptor: N-lysine methyltransferase SETD8, S-ADENOSYLMETHIONINE, UNKNOWN ATOM OR ION, ...
Authors:Yu, W, Tempel, W, Li, Y, El Bakkouri, M, Shapira, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2012-12-21
Release date:2013-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of SETD8 with SAM
To be Published
4IJD
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BU of 4ijd by Molmil
Crystal structure of methyltransferase domain of human PR domain-containing protein 9
Descriptor: Histone-lysine N-methyltransferase PRDM9, UNKNOWN ATOM OR ION, ZINC ION
Authors:Dong, A, Dombrovski, L, Li, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-12-21
Release date:2013-02-13
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of methyltransferase domain of human PR domain-containing protein 9
To be Published
3TTF
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BU of 3ttf by Molmil
Crystal structure of E. coli HypF with AMP and carbamoyl phosphate
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Transcriptional regulatory protein, ...
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-14
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
3TVM
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BU of 3tvm by Molmil
Structure of the mouse CD1d-SMC124-iNKT TCR complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Girardi, E, Li, Y, Zajonc, D.M.
Deposit date:2011-09-20
Release date:2012-02-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Glycolipids that Elicit IFN-gama-Biased Responses from Natural Killer T Cells
Chem.Biol., 18, 2011
3TSQ
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BU of 3tsq by Molmil
Crystal structure of E. coli HypF with ATP and Carbamoyl phosphate
Descriptor: 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine, MAGNESIUM ION, Transcriptional regulatory protein, ...
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-13
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
3TSP
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BU of 3tsp by Molmil
Crystal structure of E. coli HypF
Descriptor: MAGNESIUM ION, Transcriptional regulatory protein, ZINC ION
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-13
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
4JXM
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BU of 4jxm by Molmil
Crystal structure of RRP9 WD40 repeats
Descriptor: U3 small nucleolar RNA-interacting protein 2, UNKNOWN ATOM OR ION
Authors:Wu, X, Tempel, W, Xu, C, El Bakkouri, M, He, H, Seitova, A, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-03-28
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of RRP9 WD40 repeats
To be Published
3TTC
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BU of 3ttc by Molmil
Crystal structure of E. coli HypF with ADP and carbamoyl phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcriptional regulatory protein, ...
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-14
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
3TSU
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BU of 3tsu by Molmil
Crystal structure of E. coli HypF with AMP-PNP and carbamoyl phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-13
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
3U35
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BU of 3u35 by Molmil
Crystal structure of the general stress FMN/FAD binding protein from the phytopathogen Xanthomonas citri
Descriptor: General stress protein, TRIETHYLENE GLYCOL
Authors:Hilario, E, Li, Y, Fan, L.
Deposit date:2011-10-04
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of a Xanthomonas general stress protein involved in citrus canker reveals its flavin-binding property.
Acta Crystallogr.,Sect.D, 68, 2012
3TTD
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BU of 3ttd by Molmil
Crystal structure of E. coli HypF with AMP-CPP and carbamoyl phosphate
Descriptor: MAGNESIUM ION, Transcriptional regulatory protein, ZINC ION
Authors:Petkun, S, Shi, R, Li, Y, Cygler, M.
Deposit date:2011-09-14
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
4K12
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BU of 4k12 by Molmil
Structural Basis for Host Specificity of Factor H Binding by Streptococcus pneumoniae
Descriptor: Choline binding protein A, Complement factor H
Authors:Liu, A, Achila, D, Banerjee, R, Martinez-Hackert, E, Li, Y, Yan, H.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.079 Å)
Cite:Structural determinants of host specificity of complement Factor H recruitment by Streptococcus pneumoniae.
Biochem.J., 465, 2015
6IZT
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BU of 6izt by Molmil
Crystal structure of Haemophilus Influenzae BamA POTRA3-5
Descriptor: Outer membrane protein assembly factor BamA
Authors:Ma, X, Wang, Q, Li, Y, Tan, P, Wu, H, Wang, P, Dong, X, Hong, L, Meng, G.
Deposit date:2018-12-20
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:How BamA recruits OMP substratesviapoly-POTRAs domain.
Faseb J., 33, 2019
6IZS
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BU of 6izs by Molmil
Crystal structure of Haemophilus influenzae BamA POTRA4
Descriptor: Outer membrane protein assembly factor BamA
Authors:Ma, X, Wang, Q, Li, Y, Tan, P, Wu, H, Wang, P, Dong, X, Hong, L, Meng, G.
Deposit date:2018-12-20
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:How BamA recruits OMP substratesviapoly-POTRAs domain.
Faseb J., 33, 2019
3FDR
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BU of 3fdr by Molmil
Crystal structure of TDRD2
Descriptor: Tudor and KH domain-containing protein
Authors:Amaya, M.F, Adams, M.A, Guo, Y, Li, Y, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2008-11-26
Release date:2009-01-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi
Proc.Natl.Acad.Sci.USA, 106, 2009
4KY1
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BU of 4ky1 by Molmil
humanized HP1/2 Fab
Descriptor: IMMUNOGLOBULIN IGG1 FAB, HEAVY CHAIN, LIGHT CHAIN
Authors:Arndt, J.W, Hanf, K.J.M, Lugovskoy, A, Chen, L.L, Jarpe, M, Boriack-Sjodin, A, Li, Y, van Vlijmen, H, Pepinsky, B, Taylor, F, Silvian, L, Taveras, A.
Deposit date:2013-05-28
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Antibody humanization by redesign of complementarity-determining region residues proximate to the acceptor framework.
METHODS (SAN DIEGO), 65, 2014
6J09
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BU of 6j09 by Molmil
Crystal structure of Haemophilus Influenzae BamA POTRA1-4
Descriptor: Outer membrane protein assembly factor BamA
Authors:Ma, X, Wang, Q, Li, Y, Tan, P, Wu, H, Wang, P, Dong, X, Hong, L, Meng, G.
Deposit date:2018-12-21
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:How BamA recruits OMP substratesviapoly-POTRAs domain.
Faseb J., 33, 2019
4MTL
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BU of 4mtl by Molmil
Human Methyltransferase-Like Protein 21C
Descriptor: Protein-lysine methyltransferase METTL21C, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN ATOM OR ION
Authors:Hong, B.S, Tempel, W, Dong, A, Li, Y, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2013-09-19
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Human Methyltransferase-Like Protein 21C
To be Published
4MYV
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BU of 4myv by Molmil
Free HSV-2 gD structure
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D
Authors:Lu, G, Zhang, N, Qi, J, Li, Y, Chen, Z, Zheng, C, Yan, J, Gao, G.F.
Deposit date:2013-09-28
Release date:2014-10-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Crystal structure of herpes simplex virus 2 gD bound to nectin-1 reveals a conserved mode of receptor recognition.
J.Virol., 88, 2014
5WZX
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BU of 5wzx by Molmil
Structural basis for a pentacyclic oleanane-type triterpenoid as a ligand of FXR
Descriptor: (4aR,6aR,6aS,6bS,8aS,9R,12aR,14bR)-2,2,6a,6b,9,12a-hexamethyl-10-oxidanylidene-1,3,4,5,6,6a,7,8,8a,9,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid, (R,R)-2,3-BUTANEDIOL, Bile acid receptor, ...
Authors:Lu, Y, Li, Y.
Deposit date:2017-01-19
Release date:2018-01-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Identification of an Oleanane-Type Triterpene Hedragonic Acid as a Novel Farnesoid X Receptor Ligand with Liver Protective Effects and Anti-inflammatory Activity
Mol. Pharmacol., 93, 2018
4MYW
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BU of 4myw by Molmil
Structure of HSV-2 gD bound to nectin-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D, ...
Authors:Lu, G, Zhang, N, Qi, J, Li, Y, Chen, Z, Zheng, C, Yan, J, Gao, G.F.
Deposit date:2013-09-28
Release date:2014-10-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.189 Å)
Cite:Crystal structure of herpes simplex virus 2 gD bound to nectin-1 reveals a conserved mode of receptor recognition.
J.Virol., 88, 2014
5Y5N
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BU of 5y5n by Molmil
Crystal structure of human Sirtuin 2 in complex with a selective inhibitor
Descriptor: 2-[[3-(2-phenylethoxy)phenyl]amino]benzamide, NAD-dependent protein deacetylase sirtuin-2, ZINC ION
Authors:Mellini, P, Itoh, Y, Tsumoto, H, Li, Y, Suzuki, M, Tokuda, N, Kakizawa, T, Miura, Y, Takeuchi, J, Lahtela-Kakkonen, M, Suzuki, T.
Deposit date:2017-08-09
Release date:2017-09-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Potent mechanism-based sirtuin-2-selective inhibition by anin situ-generated occupant of the substrate-binding site, "selectivity pocket" and NAD+-binding site.
Chem Sci, 8, 2017
4ER5
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BU of 4er5 by Molmil
Crystal structure of human DOT1L in complex with 2 molecules of EPZ004777
Descriptor: 7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Histone-lysine N-methyltransferase, H3 lysine-79 specific, ...
Authors:Wernimont, A.K, Tempel, W, Yu, W, Scopton, A, Li, Y, Nguyen, K.T, Federation, A, Marineau, J, Qi, J, Vedadi, M, Bradner, J.E, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2012-04-19
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Catalytic site remodelling of the DOT1L methyltransferase by selective inhibitors.
Nat Commun, 3, 2012

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