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PDB: 463 件

2ZIH
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Crystal Structure of Yeast Vps74
分子名称: Vacuolar protein sorting-associated protein 74
著者Schmitz, K.R, Li, S, Setty, T.G, Ferguson, K.M.
登録日2008-02-18
公開日2008-04-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Golgi localization of glycosyltransferases requires a Vps74p oligomer.
Dev.Cell, 14, 2008
1ZUC
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Progesterone receptor ligand binding domain in complex with the nonsteroidal agonist tanaproget
分子名称: 5-(4,4-DIMETHYL-2-THIOXO-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-6-YL)-1-METHYL-1H-PYRROLE-2-CARBONITRILE, Progesterone receptor, SULFATE ION
著者Zhang, Z, Olland, A.M, Zhu, Y, Cohen, J, Berrodin, T, Chippari, S, Appavu, C, Li, S, Wilhem, J, Chopra, R, Fensome, A, Zhang, P, Wrobel, J, Unwalla, R.J, Lyttle, C.R, Winneker, R.C.
登録日2005-05-30
公開日2005-07-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular and pharmacological properties of a potent and selective novel nonsteroidal progesterone receptor agonist tanaproget
J.Biol.Chem., 280, 2005
4MY5
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BU of 4my5 by Molmil
Crystal structure of the aromatic amino acid aminotransferase from Streptococcus mutants
分子名称: Putative amino acid aminotransferase
著者Cong, X, Li, X, Ge, J, Feng, Y, Feng, X, Li, S.
登録日2013-09-27
公開日2014-10-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Crystal structure of the aromatic-amino-acid aminotransferase from Streptococcus mutans.
Acta Crystallogr.,Sect.F, 75, 2019
1Z8D
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BU of 1z8d by Molmil
Crystal Structure of Human Muscle Glycogen Phosphorylase a with AMP and Glucose
分子名称: ADENINE, ADENOSINE MONOPHOSPHATE, Glycogen phosphorylase, ...
著者Lukacs, C.M, Oikonomakos, N.G, Crowther, R.L, Hong, L.N, Kammlott, R.U, Levin, W, Li, S, Liu, C.M, Lucas-McGady, D, Pietranico, S, Reik, L.
登録日2005-03-30
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of human muscle glycogen phosphorylase a with bound glucose and AMP: An intermediate conformation with T-state and R-state features.
Proteins, 63, 2006
2AHX
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BU of 2ahx by Molmil
Crystal structure of ErbB4/HER4 extracellular domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-4, SULFATE ION, ...
著者Bouyain, S, Longo, P.A, Li, S, Ferguson, K.M, Leahy, D.J.
登録日2005-07-28
公開日2005-09-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献The extracellular region of ErbB4 adopts a tethered conformation in the absence of ligand
Proc.Natl.Acad.Sci.USA, 102, 2005
4R7A
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BU of 4r7a by Molmil
Crystal Structure of RBBP4 bound to PHF6 peptide
分子名称: GLYCEROL, Histone-binding protein RBBP4, PHD finger protein 6
著者Liu, Z, Li, F, Zhang, B, Li, S, Wu, J, Shi, Y.
登録日2014-08-27
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis of Plant Homeodomain Finger 6 (PHF6) Recognition by the Retinoblastoma Binding Protein 4 (RBBP4) Component of the Nucleosome Remodeling and Deacetylase (NuRD) Complex
J.Biol.Chem., 290, 2015
6A50
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structure of benzoylformate decarboxylases in complex with cofactor TPP
分子名称: MAGNESIUM ION, THIAMINE DIPHOSPHATE, benzoylformate decarboxylases
著者Guo, Y, Wang, S, Nie, Y, Li, S.
登録日2018-06-21
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Synthetic Pathway for Acetyl-Coenzyme A Biosynthesis
Nat Commun, 2019
7YC8
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BU of 7yc8 by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 1 undergoing the first-step self-splicing
分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA (388-MER)
著者Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
登録日2022-07-01
公開日2023-07-05
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCG
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Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the first-step self-splicing
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (393-MER), ...
著者Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
登録日2022-07-01
公開日2023-07-05
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCI
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Cryo-EM structure of Tetrahymena ribozyme conformation 4 undergoing the first-step self-splicing
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (389-MER), ...
著者Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
登録日2022-07-01
公開日2023-07-05
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCH
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BU of 7ych by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the first-step self-splicing
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (393-MER), ...
著者Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
登録日2022-07-01
公開日2023-07-05
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YTW
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BU of 7ytw by Molmil
Structural basis of vitamin C recognition and transport by mammalian SVCT1 transporter
分子名称: ASCORBIC ACID, SODIUM ION, Solute carrier family 23 member 1
著者She, J, Wang, M, He, J, Zhang, K, Li, S.
登録日2022-08-16
公開日2023-05-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of vitamin C recognition and transport by mammalian SVCT1 transporter.
Nat Commun, 14, 2023
7YTY
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Mouse SVCT1 in an apo state
分子名称: Solute carrier family 23 member 1
著者She, J, Wang, M, He, J, Zhang, K, Li, S.
登録日2022-08-16
公開日2023-05-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of vitamin C recognition and transport by mammalian SVCT1 transporter.
Nat Commun, 14, 2023
7EVP
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BU of 7evp by Molmil
Cryo-EM structure of the Gp168-beta-clamp complex
分子名称: Beta sliding clamp, Sliding clamp inhibitor
著者Liu, B, Li, S, Liu, Y, Chen, H, Hu, Z, Wang, Z, Gou, L, Zhang, L, Ma, B, Wang, H, Matthews, S, Wang, Y, Zhang, K.
登録日2021-05-21
公開日2022-02-16
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Bacteriophage Twort protein Gp168 is a beta-clamp inhibitor by occupying the DNA sliding channel.
Nucleic Acids Res., 49, 2021
4QLA
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BU of 4qla by Molmil
Crystal structure of juvenile hormone epoxide hydrolase from the silkworm Bombyx mori
分子名称: Juvenile hormone epoxide hydrolase, PENTAETHYLENE GLYCOL
著者Zhou, K, Jia, N, Hu, C, Jiang, Y.L, Yang, J.P, Chen, Y, Li, S, Zhou, C.Z.
登録日2014-06-11
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of juvenile hormone epoxide hydrolase from the silkworm Bombyx mori.
Proteins, 82, 2014
4R0T
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BU of 4r0t by Molmil
Crystal structure of P. aeruginosa TpbA (C132S) in complex with pTyr
分子名称: PHOSPHATE ION, Protein tyrosine phosphatase TpbA, TYROSINE
著者Xu, K, Li, S, Wang, Y, Bartlam, M.
登録日2014-08-01
公開日2015-05-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Structural and Biochemical Analysis of Tyrosine Phosphatase Related to Biofilm Formation A (TpbA) from the Opportunistic Pathogen Pseudomonas aeruginosa PAO1
Plos One, 10
6JIP
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Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
分子名称: DNA (5'-D(*TP*TP*TP*TP*T)-3'), PENTAETHYLENE GLYCOL, SP_0782
著者Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
登録日2019-02-22
公開日2019-11-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.659 Å)
主引用文献Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6DM4
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BU of 6dm4 by Molmil
Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila in complex with Homo sapiens Shc1 phospho-Tyr317 peptide
分子名称: RavO, SULFATE ION, Shc1 phospho-Tyr317 peptide
著者Stogios, P.J, Evdokimova, E, Di Leo, R, Kaneko, T, Li, S, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2018-06-04
公開日2018-06-27
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila in complex with Homo sapiens Shc1 phospho-Tyr317 peptide
To Be Published
6DM3
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Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila, apoprotein
分子名称: RavO
著者Stogios, P.J, Evdokimova, E, Di Leo, R, Kaneko, T, Li, S, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2018-06-04
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila, apoprotein
To Be Published
1YOP
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The solution structure of Kti11p
分子名称: Kti11p, ZINC ION
著者Sun, J, Zhang, J, Wu, F, Xu, C, Li, S, Zhao, W, Wu, Z, Wu, J, Zhou, C.-Z, Shi, Y.
登録日2005-01-28
公開日2005-04-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of Kti11p from Saccharomyces cerevisiae reveals a novel zinc-binding module.
Biochemistry, 44, 2005
6LGL
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BU of 6lgl by Molmil
The atomic structure of varicella-zoster virus A-capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Zheng, Q, Li, S.
登録日2019-12-05
公開日2020-07-29
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Near-atomic cryo-electron microscopy structures of varicella-zoster virus capsids.
Nat Microbiol, 5, 2020
6M54
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BU of 6m54 by Molmil
Human apo ferritin frozen on TEM grid with Amorphous nickel titanium alloy supporting film
分子名称: FE (II) ION, Ferritin heavy chain
著者Huang, X, Zhang, L, Wen, Z, Chen, H, Li, S, Ji, G, Yin, C, Sun, F.
登録日2020-03-09
公開日2020-05-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Amorphous nickel titanium alloy film: A new choice for cryo electron microscopy sample preparation.
Prog.Biophys.Mol.Biol., 156, 2020
6LK6
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MLKL mutant - T357AS358A
分子名称: Mixed lineage kinase domain-like protein
著者Wang, H, Li, S, Zhang, Y.
登録日2019-12-18
公開日2020-12-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The MLKL kinase-like domain dimerization is an indispensable step of mammalian MLKL activation in necroptosis signaling.
Cell Death Dis, 12, 2021
6LK5
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MLKL mutant - T357ES358D
分子名称: Mixed lineage kinase domain-like protein
著者Wang, H.Y, Li, S, Zhang, Y.
登録日2019-12-18
公開日2020-12-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The MLKL kinase-like domain dimerization is an indispensable step of mammalian MLKL activation in necroptosis signaling.
Cell Death Dis, 12, 2021
6M52
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BU of 6m52 by Molmil
Human apo ferritin frozen on TEM grid with amorphous carbon supporting film
分子名称: FE (II) ION, Ferritin heavy chain
著者Huang, X, Zhang, L, Wen, Z, Chen, H, Li, S, Ji, G, Yin, C, Sun, F.
登録日2020-03-09
公開日2020-05-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Amorphous nickel titanium alloy film: A new choice for cryo electron microscopy sample preparation.
Prog.Biophys.Mol.Biol., 156, 2020

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