Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 237 results

4FQA
DownloadVisualize
BU of 4fqa by Molmil
Crystal structure of toxic effector Tse1
Descriptor: toxic effector Tse1
Authors:Li, L, Zhang, W, Wang, T.
Deposit date:2012-06-25
Release date:2013-06-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight on toxic effector Tse1
To be Published
8FNZ
DownloadVisualize
BU of 8fnz by Molmil
Acetylated tau repeat 1 and 2 fragment (AcR1R2)
Descriptor: Microtubule-associated protein tau, acetylated repeat 1 and 2 fragment
Authors:Li, L, Nguyen, A.B, Mullapudi, V, Joachimiak, L.
Deposit date:2022-12-29
Release date:2023-06-28
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Disease-associated patterns of acetylation stabilize tau fibril formation.
Structure, 31, 2023
3ZIU
DownloadVisualize
BU of 3ziu by Molmil
Crystal structure of Mycoplasma mobile Leucyl-tRNA Synthetase with Leu-AMS in the active site
Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, GLYCEROL, LEUCYL-TRNA SYNTHETASE
Authors:Li, L, Palencia, A, Lukk, T, Li, Z, Luthey-Schulten, Z.A, Cusack, S, Martinis, S.A, Boniecki, M.T.
Deposit date:2013-01-10
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Leucyl-tRNA Synthetase Editing Domain Functions as a Molecular Rheostat to Control Codon Ambiguity in Mycoplasma Pathogens.
Proc.Natl.Acad.Sci.USA, 110, 2013
3B9O
DownloadVisualize
BU of 3b9o by Molmil
long-chain alkane monooxygenase (LadA) in complex with coenzyme FMN
Descriptor: Alkane monooxygenase, FLAVIN MONONUCLEOTIDE
Authors:Li, L, Yang, W, Xu, F, Bartlam, M, Rao, Z.
Deposit date:2007-11-06
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of long-chain alkane monooxygenase (LadA) in complex with coenzyme FMN: unveiling the long-chain alkane hydroxylase
J.Mol.Biol., 376, 2008
3B9N
DownloadVisualize
BU of 3b9n by Molmil
Crystal structure of long-chain alkane monooxygenase (LadA)
Descriptor: Alkane monooxygenase
Authors:Li, L, Yang, W, Xu, F, Bartlam, M, Rao, Z.
Deposit date:2007-11-06
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of long-chain alkane monooxygenase (LadA) in complex with coenzyme FMN: unveiling the long-chain alkane hydroxylase
J.Mol.Biol., 376, 2008
7SH0
DownloadVisualize
BU of 7sh0 by Molmil
CRYSTAL STRUCTURE OF ENDOPLASMIC RETICULUM AMINOPEPTIDASE 2 (ERAP2) COMPLEX WITH A HIGHLY SELECTIVE AND POTENT SMALL MOLECULE
Descriptor: (2S)-N-hydroxy-3-(4-methoxyphenyl)-2-[4-({[5-(pyridin-2-yl)thiophene-2-sulfonyl]amino}methyl)-1H-1,2,3-triazol-1-yl]propanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Li, L, Bouvier, M.
Deposit date:2021-10-07
Release date:2022-07-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Discovery of the First Selective Nanomolar Inhibitors of ERAP2 by Kinetic Target-Guided Synthesis.
Angew.Chem.Int.Ed.Engl., 61, 2022
5NKM
DownloadVisualize
BU of 5nkm by Molmil
SMG8-SMG9 complex
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Li, L, Basquin, J, Conti, E.
Deposit date:2017-03-31
Release date:2017-04-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structure of a SMG8-SMG9 complex identifies a G-domain heterodimer in the NMD effector proteins.
RNA, 23, 2017
5NKK
DownloadVisualize
BU of 5nkk by Molmil
SMG8-SMG9 complex GDP bound
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Li, L, Basquin, J, Conti, E.
Deposit date:2017-03-31
Release date:2017-04-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure of a SMG8-SMG9 complex identifies a G-domain heterodimer in the NMD effector proteins.
RNA, 23, 2017
1QVO
DownloadVisualize
BU of 1qvo by Molmil
STRUCTURES OF HLA-A*1101 IN COMPLEX WITH IMMUNODOMINANT NONAMER AND DECAMER HIV-1 EPITOPES CLEARLY REVEAL THE PRESENCE OF A MIDDLE ANCHOR RESIDUE
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-11 alpha chain, ...
Authors:Li, L, McNicholl, J.M, Bouvier, M.
Deposit date:2003-08-28
Release date:2004-06-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structures of HLA-A*1101 complexed with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle, secondary anchor residue.
J.Immunol., 172, 2004
2PQ6
DownloadVisualize
BU of 2pq6 by Molmil
Crystal structure of Medicago truncatula UGT85H2- Insights into the structural basis of a multifunctional (Iso) flavonoid glycosyltransferase
Descriptor: UDP-glucuronosyl/UDP-glucosyltransferase
Authors:Li, L, Modolo, L.V, Escamilla-Trevino, L.L, Wang, X.
Deposit date:2007-05-01
Release date:2007-07-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Medicago truncatula UGT85H2 - Insights into the Structural Basis of a Multifunctional (Iso)flavonoid Glycosyltransferase.
J.Mol.Biol., 370, 2007
3C6D
DownloadVisualize
BU of 3c6d by Molmil
The pseudo-atomic structure of dengue immature virus
Descriptor: Polyprotein, prM
Authors:Li, L.
Deposit date:2008-02-04
Release date:2008-04-08
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation
Science, 319, 2008
3C5X
DownloadVisualize
BU of 3c5x by Molmil
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at low pH
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]alpha-D-altropyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L.
Deposit date:2008-02-01
Release date:2008-04-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science, 319, 2008
3C6E
DownloadVisualize
BU of 3c6e by Molmil
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at neutral pH
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Li, L.
Deposit date:2008-02-04
Release date:2008-04-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science, 319, 2008
6P2S
DownloadVisualize
BU of 6p2s by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provide novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, MHC I-peptide, MHC class I antigen
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-22
Release date:2019-10-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P23
DownloadVisualize
BU of 6p23 by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provide novel insights into antigen processing presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-20
Release date:2019-10-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P27
DownloadVisualize
BU of 6p27 by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-21
Release date:2019-10-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P2C
DownloadVisualize
BU of 6p2c by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-21
Release date:2019-10-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.396 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P2F
DownloadVisualize
BU of 6p2f by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-21
Release date:2019-10-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
7XB0
DownloadVisualize
BU of 7xb0 by Molmil
Crystal structure of Omicron BA.2 RBD complexed with hACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, L, Liao, H, Meng, Y, Li, W.
Deposit date:2022-03-19
Release date:2022-07-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of human ACE2 higher binding affinity to currently circulating Omicron SARS-CoV-2 sub-variants BA.2 and BA.1.1.
Cell, 185, 2022
1Q94
DownloadVisualize
BU of 1q94 by Molmil
Structures of HLA-A*1101 in complex with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle anchor residue
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-11 alpha chain, ...
Authors:Li, L, McNicholl, J.M, Bouvier, M.
Deposit date:2003-08-22
Release date:2004-06-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of HLA-A*1101 complexed with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle, secondary anchor residue.
J.Immunol., 172, 2004
2MMF
DownloadVisualize
BU of 2mmf by Molmil
Solution structure of AGA modified
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-14
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMR
DownloadVisualize
BU of 2mmr by Molmil
AGC FAPY modified duplex Major isomer
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*CP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*GP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
8E13
DownloadVisualize
BU of 8e13 by Molmil
Structures of HLA-B8E76C loaded with long peptides reveal novel features at the N-terminus of the groove
Descriptor: Beta-2-microglobulin, MHC class I antigen, PHE-ALA-LYS-LYS-LYS-TYR-CYS-LEU
Authors:Li, L, Bouvier, M.
Deposit date:2022-08-09
Release date:2023-07-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structures of MHC class I complexes reveal the elusive intermediate conformations explored during peptide editing.
Nat Commun, 14, 2023
2MMQ
DownloadVisualize
BU of 2mmq by Molmil
Solution structure of AGT FAPY Modified duplex
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
8E2Z
DownloadVisualize
BU of 8e2z by Molmil
Structures of HLA-B8E76C loaded with long peptides reveal novel features at the N-terminus of the groove
Descriptor: ALA-PHE-ALA-LYS-LYS-LYS-TYR-CYS-LEU, Beta-2-microglobulin, MHC class I protein (Fragment)
Authors:Li, L, Bouvier, M.
Deposit date:2022-08-16
Release date:2023-08-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystal structures of MHC class I complexes reveal the elusive intermediate conformations explored during peptide editing.
Nat Commun, 14, 2023

236060

PDB entries from 2025-05-14

PDB statisticsPDBj update infoContact PDBjnumon