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PDB: 8 results

2N0Q
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N2-dG-IQ modified DNA at the G1 position of the NarI recognition sequence
Descriptor: DNA_(5'-D(*CP*TP*CP*(IQG)P*GP*CP*GP*CP*CP*AP*TP*C)-3'), DNA_(5'-D(*GP*AP*TP*GP*GP*CP*GP*CP*CP*GP*AP*G)-3')
Authors:Stavros, K, Hawkins, E, Rizzo, C, Stone, M.
Deposit date:2015-03-11
Release date:2015-08-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Base-Displaced Intercalated Conformation of the 2-Amino-3-methylimidazo[4,5-f]quinoline N(2)-dG DNA Adduct Positioned at the Nonreiterated G(1) in the NarI Restriction Site.
Chem.Res.Toxicol., 28, 2015
2MMF
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Solution structure of AGA modified
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-14
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMR
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AGC FAPY modified duplex Major isomer
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*CP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*GP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMQ
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BU of 2mmq by Molmil
Solution structure of AGT FAPY Modified duplex
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMS
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AG(7-deaza)G FAPY modified duplex
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*(7GU)P*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*CP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
4UFZ
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Synthesis of Novel NAD Dependant DNA Ligase Inhibitors via Negishi Cross-Coupling: Development of SAR and Resistance Studies
Descriptor: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 5,7-bis(azanyl)-2-tert-butyl-4-(1,3-thiazol-2-yl)pyrido[2,3-d]pyrimidine-6-carbonitrile, DNA LIGASE
Authors:Murphy-Benenato, K.E, Boriack-Sjodin, P.A, Martinez-Botella, G, Carcanague, D, Gingipali, L, Gowravaram, M, Harang, J, Hale, M, Ioannidis, G, Jahic, H, Johnstone, M, Kutschke, A, Laganas, V.A, Loch, J, Oguto, H, Patel, S.J.
Deposit date:2015-03-20
Release date:2015-10-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Negishi Cross-Coupling Enabled Synthesis of Novel Nad(+)-Dependent DNA Ligase Inhibitors and Sar Development.
Bioorg.Med.Chem.Lett., 25, 2015
1DU6
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SOLUTION STRUCTURE OF THE TRUNCATED PBX HOMEODOMAIN
Descriptor: HOMEOBOX PROTEIN PBX1
Authors:Sprules, T, Green, N, Featherstone, M, Gehring, K.
Deposit date:2000-01-14
Release date:2000-08-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational changes in the PBX homeodomain and C-terminal extension upon binding DNA and HOX-derived YPWM peptides.
Biochemistry, 39, 2000
1LFU
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NMR Solution Structure of the Extended PBX Homeodomain Bound to DNA
Descriptor: 5'-D(*GP*CP*GP*CP*AP*TP*GP*AP*TP*TP*GP*CP*CP*C)-3', 5'-D(*GP*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*CP*GP*C)-3', homeobox protein PBX1
Authors:Sprules, T, Green, N, Featherstone, M, Gehring, K.
Deposit date:2002-04-12
Release date:2003-01-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Lock and Key Binding of the HOX YPWM Peptide to the PBX Homeodomain
J.Biol.Chem., 278, 2003

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