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PDB: 321 件
7WLD
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BU of 7wld by Molmil
Cryo-EM structure of the human glycosylphosphatidylinositol transamidase complex at 2.53 Angstrom resolution
分子名称: (4S,7R)-7-[(hexadecanoyloxy)methyl]-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-3,5,8-trioxa-4lambda~5~-phosphahexacosan-1-aminium, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xu, Y, Li, T, Luo, Y, Chao, Y, Jia, G, Zhou, Z, Su, Z, Qu, Q, Li, D.
登録日2022-01-13
公開日2022-04-27
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Molecular insights into biogenesis of glycosylphosphatidylinositol anchor proteins.
Nat Commun, 13, 2022
8J03
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BU of 8j03 by Molmil
Human KCNQ2(F104A)-CaM-PIP2-CBD complex in state I
分子名称: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, cannabidiol
著者Ma, D, Li, D, Guo, J.
登録日2023-04-09
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
2AE9
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BU of 2ae9 by Molmil
Solution Structure of the theta subunit of DNA polymerase III from E. coli
分子名称: DNA polymerase III, theta subunit
著者Mueller, G.A, Kirby, T.W, Derose, E.F, Li, D, Schaaper, R.M, London, R.E.
登録日2005-07-21
公開日2005-10-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Solution Structure of the Escherichia coli DNA Polymerase III {theta} Subunit.
J.Bacteriol., 187, 2005
5DV5
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BU of 5dv5 by Molmil
The fatty acid-responsive FadR repressor of Vibrio alginolyticus complex with Palmitoyl-CoA
分子名称: GntR family transcriptional regulator, Palmitoyl-CoA
著者Lin, Y, Li, D.F, Feng, Y.J.
登録日2015-09-21
公開日2016-10-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Snapshort of Vibrio FadR-ligand complex structure reveals a new mechanism for bacterial fatty acid sensing
To Be Published
4TQK
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BU of 4tqk by Molmil
Structural basis of specific recognition of non-reducing terminal N-acetylglucosamine by an Agrocybe aegerita lection
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lectin 2
著者Hu, Y.L, Ren, X.M, Li, D.F, Jiang, S, Lan, X.Q, Sun, H, Wang, D.C.
登録日2014-06-11
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Specific Recognition of Non-Reducing Terminal N-Acetylglucosamine by an Agrocybe aegerita Lectin.
Plos One, 10, 2015
4O9R
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BU of 4o9r by Molmil
Human Smoothened Receptor structure in complex with cyclopamine
分子名称: Cyclopamine, Smoothened homolog/Soluble cytochrome b562 chimeric protein
著者Wang, C, Weierstall, U, James, D, White, T.A, Wang, D, Liu, W, Spence, J.C.H, Doak, R.B, Nelson, G, Fromme, P, Fromme, R, Grotjohann, I, Kupitz, C, Zatsepin, N.A, Liu, H, Basu, S, Wacker, D, Han, G.W, Katritch, V, Boutet, S, Messerschmidt, M, Willams, G.J, Koglin, J.E, Seibert, M.M, Klinker, M, Gati, C, Shoeman, R.L, Barty, A, Chapman, H.N, Kirian, R.A, Beyerlein, K.R, Stevens, R.C, Li, D, Shah, S.T.A, Howe, N, Caffrey, M, Cherezov, V, GPCR Network (GPCR)
登録日2014-01-02
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.204 Å)
主引用文献Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.
Nat Commun, 5, 2014
5YT1
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Crystal structrure of near infrared fluoresecent protein mNeptune684
分子名称: near infrared fluoresecent protein mNeptune684
著者Zhang, X.E, Wang, D.B, Yuan, Y, Li, D.F.
登録日2017-11-16
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structrure of near infrared fluoresecent protein mNeptune684
to be published
4NC3
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BU of 4nc3 by Molmil
Crystal structure of the 5-HT2B receptor solved using serial femtosecond crystallography in lipidic cubic phase.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHOLESTEROL, ...
著者Liu, W, Wacker, D, Gati, C, Han, G.W, James, D, Wang, D, Nelson, G, Weierstall, U, Katritch, V, Barty, A, Zatsepin, N.A, Li, D, Messerschmidt, M, Boutet, S, Williams, G.J, Koglin, J.E, Seibert, M.M, Wang, C, Shah, S.T.A, Basu, S, Fromme, R, Kupitz, C, Rendek, K.N, Grotjohann, I, Fromme, P, Kirian, R.A, Beyerlein, K.R, White, T.A, Chapman, H.N, Caffrey, M, Spence, J.C.H, Stevens, R.C, Cherezov, V, GPCR Network (GPCR)
登録日2013-10-23
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Serial femtosecond crystallography of G protein-coupled receptors.
Science, 342, 2013
5YZ2
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BU of 5yz2 by Molmil
the cystathionine-beta-synthase (CBS) domain of magnesium and cobalt efflux protein CorC in complex with both C2'- and C3'-endo AMP
分子名称: ADENOSINE MONOPHOSPHATE, Magnesium and cobalt efflux protein CorC
著者Feng, N, Qi, C, Li, D.F, Wang, D.C.
登録日2017-12-12
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The C2'- and C3'-endo equilibrium for AMP molecules bound in the cystathionine-beta-synthase domain.
Biochem. Biophys. Res. Commun., 497, 2018
7WQV
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BU of 7wqv by Molmil
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Ab08, ...
著者Zha, J, Meng, L, Zhang, X, Li, D.
登録日2022-01-26
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Spike-destructing human antibody effectively neutralizes Omicron-included SARS-CoV-2 variants with therapeutic efficacy.
Plos Pathog., 19, 2023
7D2Z
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BU of 7d2z by Molmil
Structure of sybody SR31 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD)
分子名称: ACETATE ION, FORMIC ACID, GLYCEROL, ...
著者Li, T, Cai, H, Yao, H, Qin, W, Li, D.
登録日2020-09-17
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献A high-affinity RBD-targeting nanobody improves fusion partner's potency against SARS-CoV-2.
Plos Pathog., 17, 2021
7D30
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BU of 7d30 by Molmil
Structure of sybody MR17-SR31 fusion in complex with the SARS-CoV-2 S Receptor Binding domain (RBD)
分子名称: 1,3-BUTANEDIOL, ACETATE ION, CADMIUM ION, ...
著者Li, T, Yao, H, Cai, H, Qin, W, Li, D.
登録日2020-09-17
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A high-affinity RBD-targeting nanobody improves fusion partner's potency against SARS-CoV-2.
Plos Pathog., 17, 2021
5X7Z
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BU of 5x7z by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887 COMPLEX WITH P-AMINOSALICYLIC ACID
分子名称: 2-HYDROXY-4-AMINOBENZOIC ACID, Uncharacterized HTH-type transcriptional regulator Rv2887
著者Gao, Y.R, Li, D.F, Wang, D.C, Bi, L.J.
登録日2017-02-28
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis
Sci Rep, 7, 2017
7C8V
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BU of 7c8v by Molmil
Structure of sybody SR4 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Spike protein S1, ...
著者Li, T, Yao, H, Cai, H, Qin, W, Li, D.
登録日2020-06-03
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A synthetic nanobody targeting RBD protects hamsters from SARS-CoV-2 infection.
Nat Commun, 12, 2021
7CAN
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BU of 7can by Molmil
Structure of sybody MR17-K99Y in complex with the SARS-CoV-2 S Receptor-binding domain (RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Spike protein S1, ...
著者Li, T, Yao, H, Cai, H, Qin, W, Li, D.
登録日2020-06-09
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献A synthetic nanobody targeting RBD protects hamsters from SARS-CoV-2 infection.
Nat Commun, 12, 2021
8J8G
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BU of 8j8g by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and cidofovir diphosphate
分子名称: CALCIUM ION, DNA (5'-D(P*AP*GP*CP*TP*GP*CP*TP*AP*TP*GP*AP*GP*AP*TP*TP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(P*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*CP*TP*TP*AP*AP*TP*CP*TP*CP*AP*CP*AP*TP*AP*GP*CP*AP*GP*CP*T)-3'), ...
著者Xu, Y, Wu, Y, Wu, X, Zhang, Y, Yang, Y, Li, D, Yang, B, Gao, K, Zhang, Z, Dong, C.
登録日2023-05-01
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structural basis of human mpox viral DNA replication inhibition by brincidofovir and cidofovir.
Int.J.Biol.Macromol., 270, 2024
5Y6H
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BU of 5y6h by Molmil
Crystal structure of YcgR-N domain of YcgR from Escherichia coli
分子名称: Flagellar brake protein YcgR
著者Hou, Y.J, Yang, W.S, Wang, D.C, Li, D.F.
登録日2017-08-11
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.774 Å)
主引用文献Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility inEscherichia coli.
J.Biol.Chem., 295, 2020
8J7N
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BU of 8j7n by Molmil
The cryo-EM structure of Fe3+ induced alpha-syn fibril.
分子名称: Transmembrane protein 106B
著者Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
登録日2023-04-27
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The cryo-EM structure of PBB3 bound TMEM106B fibril.
To Be Published
8J7P
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The cryo-EM structure of PiB bound TMEM106B fibril.
分子名称: Transmembrane protein 106B
著者Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
登録日2023-04-27
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The cryo-EM structure of PiB bound TMEM106B fibril.
To Be Published
8J86
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BU of 8j86 by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in a DNA binding form
分子名称: CALCIUM ION, DNA (5'-D(P*AP*GP*CP*TP*GP*CP*TP*AP*TP*GP*TP*GP*AP*GP*AP*TP*TP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(P*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*CP*TP*TP*AP*AP*TP*CP*TP*CP*AP*CP*AP*TP*AP*GP*CP*AP*GP*CP*TP*)-3'), ...
著者Xu, Y, Wu, Y, Wu, X, Zhang, Y, Yang, Y, Li, D, Yang, B, Gao, K, Zhang, Z, Dong, C.
登録日2023-04-30
公開日2024-05-01
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural basis of human mpox viral DNA replication inhibition by brincidofovir and cidofovir.
Int.J.Biol.Macromol., 270, 2024
8J8F
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BU of 8j8f by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(P*AP*GP*CP*TP*GP*CP*TP*AP*TP*GP*AP*GP*AP*TP*TP*AP*AP*GP*TP*TP*AP*T)-3'), ...
著者Xu, Y, Wu, Y, Wu, X, Zhang, Y, Yang, Y, Li, D, Yang, B, Gao, K, Zhang, Z, Dong, C.
登録日2023-05-01
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structural basis of human mpox viral DNA replication inhibition by brincidofovir and cidofovir.
Int.J.Biol.Macromol., 270, 2024
6KJ3
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BU of 6kj3 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.60 A
分子名称: RNA-binding protein FUS
著者Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
登録日2019-07-20
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (0.6 Å)
主引用文献Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
6KJ4
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BU of 6kj4 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from single crystal at 0.65 A
分子名称: RNA-binding protein FUS
著者Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
登録日2019-07-20
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (0.65 Å)
主引用文献Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
6KJ2
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BU of 6kj2 by Molmil
200kV MicroED structure of FUS (37-42) SYSGYS solved from single crystal at 0.67 A
分子名称: RNA-binding protein FUS
著者Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
登録日2019-07-20
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (0.67 Å)
主引用文献Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
3TC1
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BU of 3tc1 by Molmil
Crystal Structure of Octaprenyl Pyrophosphate Synthase from Helicobacter pylori
分子名称: MAGNESIUM ION, Octaprenyl Pyrophosphate Synthase
著者Zhang, J.Y, Zhang, X.L, Li, D.F, Zou, Q.M, Wang, D.C.
登録日2011-08-08
公開日2011-08-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Octaprenyl Pyrophosphate Synthase from Helicobacter pylori
To be Published

221051

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