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PDB: 797 results

1QKG
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DNA DECAMER DUPLEX CONTAINING T-T DEWAR PHOTOPRODUCT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3')
Authors:Lee, J.-H, Bae, S.-H, Choi, Y.-J, Choi, B.-S.
Deposit date:1999-07-20
Release date:2000-05-11
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Dewar Photoproduct of Thymidylyl(3'-->5')-Thymidine (Dewar Product) Exhibits Mutagenic Behavior in Accordance with the "A Rule".
Proc.Natl.Acad.Sci.USA, 97, 2000
7JP1
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BU of 7jp1 by Molmil
Structure of wild-type substrate free SARS-CoV-2 Mpro.
Descriptor: 3C-like proteinase
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-08-07
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
5GPC
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BU of 5gpc by Molmil
Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
Descriptor: DNA (5'-D(P*CP*AP*TP*GP*AP*AP*TP*GP*AP*GP*TP*AP*TP*TP*CP*AP*TP*TP*CP*AP*T)-3'), DNA (5'-D(P*GP*AP*TP*GP*AP*AP*TP*GP*AP*AP*TP*AP*CP*TP*CP*AP*TP*TP*CP*AP*T)-3'), Transcriptional regulator (TetR/AcrR family)
Authors:Lee, J.Y, Yeo, H.K, Park, T.W.
Deposit date:2016-08-01
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.
Nucleic Acids Res., 45, 2017
7JOY
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Product structure of SARS-CoV-2 Mpro C145A mutant in complex with its C-terminal autoprocessing sequence.
Descriptor: 3C-like proteinase
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-08-07
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
5FUU
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Ectodomain of cleaved wild type JR-FL EnvdCT trimer in complex with PGT151 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, J.H, Ward, A.B.
Deposit date:2016-01-29
Release date:2016-03-09
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-Em Structure of a Native, Fully Glycosylated and Cleaved HIV-1 Envelope Trimer
Science, 351, 2016
7KHP
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BU of 7khp by Molmil
Acyl-enzyme intermediate structure of SARS-CoV-2 Mpro in complex with its C-terminal autoprocessing sequence.
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-10-21
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
1D5R
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BU of 1d5r by Molmil
Crystal Structure of the PTEN Tumor Suppressor
Descriptor: L(+)-TARTARIC ACID, PHOSPHOINOSITIDE PHOSPHATASE PTEN
Authors:Lee, J.O, Yang, H, Georgescu, M.-M, Di Cristofano, A, Pavletich, N.P.
Deposit date:1999-10-11
Release date:1999-11-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the PTEN tumor suppressor: implications for its phosphoinositide phosphatase activity and membrane association.
Cell(Cambridge,Mass.), 99, 1999
4MVC
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BU of 4mvc by Molmil
Crystal Structure of a Mammalian Cytidylyltransferase
Descriptor: Choline-phosphate cytidylyltransferase A, [2-CYTIDYLATE-O'-PHOSPHONYLOXYL]-ETHYL-TRIMETHYL-AMMONIUM
Authors:Lee, J, Cornell, R.B.
Deposit date:2013-09-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Autoinhibition of CTP:Phosphocholine Cytidylyltransferase (CCT), the Regulatory Enzyme in Phosphatidylcholine Synthesis, by Its Membrane-binding Amphipathic Helix.
J.Biol.Chem., 289, 2014
2F2B
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BU of 2f2b by Molmil
Crystal structure of integral membrane protein Aquaporin AqpM at 1.68A resolution
Descriptor: Aquaporin aqpM, GLYCEROL
Authors:Lee, J.K, Kozono, D, Remis, J, Kitagawa, Y, Agre, P, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2005-11-15
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A.
Proc.Natl.Acad.Sci.Usa, 102, 2005
3C4T
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BU of 3c4t by Molmil
Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer
Descriptor: CADMIUM ION, Endoribonuclease Dicer
Authors:Lee, J.K, Du, Z, Tjhen, R.J, Stroud, R.M, James, T.L.
Deposit date:2008-01-30
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2QZX
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BU of 2qzx by Molmil
Secreted aspartic proteinase (Sap) 5 from Candida albicans
Descriptor: Candidapepsin-5, Pepstatin
Authors:Lee, J.H, Ruge, E, Borelli, C, Maskos, K, Huber, R.
Deposit date:2007-08-17
Release date:2008-07-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structures of Sap1 and Sap5: Structural comparison of the secreted aspartic proteinases from Candida albicans.
Proteins, 72, 2008
4Q16
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BU of 4q16 by Molmil
Structure of NAD+ Synthetase from Deinococcus radiodurans
Descriptor: NH(3)-dependent NAD(+) synthetase, SULFATE ION
Authors:Lee, J.Y, Park, Y.W.
Deposit date:2014-04-03
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis of the NH3-dependent NAD+ Synthetase from Deinococcus radiodurans
To be Published
7DOG
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BU of 7dog by Molmil
Crystal structure of a nuclease and capping domain of SbcD from Staphylococcus aureus
Descriptor: MANGANESE (II) ION, Nuclease SbcCD subunit D
Authors:Lee, J, Ha, N.-C.
Deposit date:2020-12-14
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of the nuclease and capping domain of SbcD from Staphylococcus aureus.
J.Microbiol, 59, 2021
3PD7
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BU of 3pd7 by Molmil
Crystal Structure of the Sixth BRCT Domain of Human TopBP1
Descriptor: DNA topoisomerase 2-binding protein 1
Authors:Lee, J, Xu, C, Cui, G, Thompson, J.R, Mer, G.
Deposit date:2010-10-22
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal Structure of the Sixth BRCT Domain of Human TopBP1
To be Published
3N8X
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BU of 3n8x by Molmil
Crystal Structure of Cyclooxygenase-1 in Complex with Nimesulide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-NITRO-2-PHENOXYMETHANESULFONANILIDE, ...
Authors:Lee, J.Y.
Deposit date:2010-05-28
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers
Biochemistry, 49, 2010
3C4B
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BU of 3c4b by Molmil
Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer
Descriptor: Endoribonuclease Dicer
Authors:Lee, J.K, Du, Z, Tjhen, R.J, Stroud, R.M, James, T.L.
Deposit date:2008-01-29
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3EQA
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BU of 3eqa by Molmil
Catalytic domain of glucoamylase from aspergillus niger complexed with tris and glycerol
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Glucoamylase, ...
Authors:Lee, J, Paetzel, M.
Deposit date:2008-09-30
Release date:2009-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the catalytic domain of glucoamylase from Aspergillus niger.
Acta Crystallogr.,Sect.F, 67, 2011
3O4A
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BU of 3o4a by Molmil
Crystal structure of Symfoil-2: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:Lee, J, Blaber, M.
Deposit date:2010-07-26
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
7CV2
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BU of 7cv2 by Molmil
Crystal structure of B. halodurans NiaR in niacin-bound form
Descriptor: NICOTINIC ACID, Transcriptional regulator NiaR, ZINC ION
Authors:Lee, J.Y, Lee, D.W, Park, Y.W, Lee, M.Y, Jeong, K.H.
Deposit date:2020-08-25
Release date:2020-12-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Structural analysis and insight into effector binding of the niacin-responsive repressor NiaR from Bacillus halodurans.
Sci Rep, 10, 2020
1GUX
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BU of 1gux by Molmil
RB POCKET BOUND TO E7 LXCXE MOTIF
Descriptor: ONCOPROTEIN, RETINOBLASTOMA PROTEIN
Authors:Lee, J.O, Russo, A.A, Pavletich, N.P.
Deposit date:1997-11-15
Release date:1998-12-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the retinoblastoma tumour-suppressor pocket domain bound to a peptide from HPV E7.
Nature, 391, 1998
3Q8W
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BU of 3q8w by Molmil
A b-aminoacyl containing thiazolidine derivative and DPPIV complex
Descriptor: Dipeptidyl peptidase 4, N-(4-{[({(2R)-3-[(3R)-3-amino-4-(2,4,5-trifluorophenyl)butanoyl]-1,3-thiazolidin-2-yl}carbonyl)amino]methyl}phenyl)-D-valine
Authors:Lee, J.O, Song, D.H.
Deposit date:2011-01-07
Release date:2011-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Discovery of b-aminoacyl containing thiazolidine derivatives as potent and selective dipeptidyl peptidase IV inhibitors
To be Published
7CV0
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Crystal structure of B. halodurans NiaR in apo form
Descriptor: Transcriptional regulator NiaR, ZINC ION
Authors:Lee, J.Y, Lee, D.W, Park, Y.W, Lee, M.Y, Jeong, K.H.
Deposit date:2020-08-25
Release date:2020-12-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural analysis and insight into effector binding of the niacin-responsive repressor NiaR from Bacillus halodurans.
Sci Rep, 10, 2020
1JYS
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BU of 1jys by Molmil
Crystal Structure of E. coli MTA/AdoHcy Nucleosidase
Descriptor: ADENINE, MTA/SAH nucleosidase
Authors:Lee, J.E, Cornell, K.A, Riscoe, M.K, Howell, P.L.
Deposit date:2001-09-13
Release date:2002-10-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of E. coli 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase reveals similarity to the purine nucleoside phosphorylases.
Structure, 9, 2001
1Z2V
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Crystal Structure of Glu60 deletion Mutant of Human Acidic Fibroblast Growth Factor
Descriptor: Heparin-binding growth factor 1, SULFATE ION
Authors:Lee, J, Blaber, M.
Deposit date:2005-03-09
Release date:2006-02-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conversion of type I 4:6 to 3:5 beta-turn types in human acidic fibroblast growth factor: Effects upon structure, stability, folding, and mitogenic function.
Proteins, 62, 2006
3OL0
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BU of 3ol0 by Molmil
Crystal structure of Monofoil-4P homo-trimer: de novo designed monomer trefoil-fold sub-domain which forms homo-trimer assembly
Descriptor: SULFATE ION, de novo designed monomer trefoil-fold sub-domain which forms homo-trimer assembly
Authors:Lee, J, Blaber, M.
Deposit date:2010-08-25
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011

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