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PDB: 234 results

1MPV
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BU of 1mpv by Molmil
Structure of bhpBR3, the BAFF-binding loop of BR3 embedded in a beta-hairpin peptide
Descriptor: BLyS Receptor 3
Authors:Kayagaki, N, Yan, M, Seshasayee, D, Wang, H, Lee, W, French, D.M, Grewal, I.S, Cochran, A.G, Gordon, N.C, Yin, J, Starovasnik, M.A, Dixit, V.M.
Deposit date:2002-09-12
Release date:2002-10-30
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:BAFF/BLyS receptor 3 binds the B cell survival factor BAFF ligand through a discrete surface loop and promotes processing of NF-kappaB2.
Immunity, 17, 2002
6NF6
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BU of 6nf6 by Molmil
Structure of chicken Otop3 in nanodiscs
Descriptor: CHOLESTEROL HEMISUCCINATE, Otopetrin3
Authors:Saotome, K, Lee, W.H, Liman, E.R, Ward, A.B.
Deposit date:2018-12-18
Release date:2019-06-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structures of the otopetrin proton channels Otop1 and Otop3.
Nat.Struct.Mol.Biol., 26, 2019
2G1D
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BU of 2g1d by Molmil
Solution Structure of Ribosomal Protein S24E from Thermoplasma acidophilum
Descriptor: 30S ribosomal protein S24e
Authors:Jeon, B.-Y, Hong, E.-M, Jung, J.-W, Yee, A, Arrowsmith, C.H, Lee, W.
Deposit date:2006-02-14
Release date:2007-02-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of TA1092, a ribosomal protein S24e from Thermoplasma acidophilum
Proteins, 64, 2006
1L3X
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BU of 1l3x by Molmil
Solution Structure of Novel Disintegrin Salmosin
Descriptor: platelet aggregation inhibitor disintegrin
Authors:Shin, J, Lee, W.
Deposit date:2002-03-01
Release date:2003-12-23
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Solution structure of a novel disintegrin, salmosin, from Agkistrondon halys venom
Biochemistry, 42, 2003
3K9O
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BU of 3k9o by Molmil
The crystal structure of E2-25K and UBB+1 complex
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Kang, G.B, Ko, S, Song, S.M, Lee, W, Eom, S.H.
Deposit date:2009-10-16
Release date:2010-09-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of E2-25K/UBB+1 Interaction for Neurotoxicity of Alzheimer Disease by Proteasome Inhibition
To be Published
8TQ1
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BU of 8tq1 by Molmil
HIV-1 BG505 Env SOSIP in complex with bovine Fab Bess4 and non-human primate Fab RM20A3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bovine Bess4 Fab heavy chain, ...
Authors:Ozorowski, G, Lee, W.H, Ward, A.B.
Deposit date:2023-08-06
Release date:2024-08-07
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultralong CDRH3 repertoire.
Plos Pathog., 20, 2024
1O07
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BU of 1o07 by Molmil
Crystal Structure of the complex between Q120L/Y150E mutant of AmpC and a beta-lactam inhibitor (MXG)
Descriptor: 2-(1-{2-[4-(2-ACETYLAMINO-PROPIONYLAMINO)-4-CARBOXY-BUTYRYLAMINO]-6-AMINO-HEXANOYLAMINO}-2-OXO-ETHYL)-5-METHYLENE-5,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase, POTASSIUM ION
Authors:Meroueh, S.O, Minasov, G, Lee, W, Shoichet, B.K, Mobashery, S.
Deposit date:2003-02-20
Release date:2003-08-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural Aspects for Evolution of beta-Lactamases from Penicillin-Binding Proteins
J.Am.Chem.Soc., 125, 2003
3X0X
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BU of 3x0x by Molmil
Crystal structure of apo-DszC from Rhodococcus erythropolis D-1
Descriptor: DszC
Authors:Guan, L.J, Lee, W.C, Wang, S.P, Ohtsuka, J, Tanokura, M.
Deposit date:2014-10-23
Release date:2015-02-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structures of apo-DszC and FMN-bound DszC from Rhodococcus erythropolis D-1.
Febs J., 282, 2015
1MJE
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BU of 1mje by Molmil
STRUCTURE OF A BRCA2-DSS1-SSDNA COMPLEX
Descriptor: 5'-D(P*TP*TP*TP*TP*TP*T)-3', Deleted in split hand/split foot protein 1, breast cancer 2
Authors:Yang, H, Jeffrey, P.D, Miller, J, Kinnucan, E, Sun, Y, Thoma, N.H, Zheng, N, Chen, P.L, Lee, W.H, Pavletich, N.P.
Deposit date:2002-08-27
Release date:2002-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure.
Science, 297, 2002
3X0Y
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BU of 3x0y by Molmil
Crystal structure of FMN-bound DszC from Rhodococcus erythropolis D-1
Descriptor: DszC, FLAVIN MONONUCLEOTIDE
Authors:Guan, L.J, Lee, W.C, Wang, S.P, Ohtsuka, J, Tanokura, M.
Deposit date:2014-10-23
Release date:2015-02-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of apo-DszC and FMN-bound DszC from Rhodococcus erythropolis D-1.
Febs J., 282, 2015
1R02
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BU of 1r02 by Molmil
Solution structure of Human Orexin-A:Regulator of Appetite and Wakefulness
Descriptor: Orexin-A
Authors:Kim, H.-Y, Hong, E, Kim, J.-I, Lee, W.
Deposit date:2003-09-19
Release date:2004-09-19
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Solution structure of human orexin-A: regulator of appetite and wakefulness.
J.Biochem.Mol.Biol., 37, 2004
1HVB
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BU of 1hvb by Molmil
CRYSTAL STRUCTURE OF STREPTOMYCES R61 DD-PEPTIDASE COMPLEXED WITH A NOVEL CEPHALOSPORIN ANALOG OF CELL WALL PEPTIDOGLYCAN
Descriptor: 5-{3-(S)-(4-(R)-ACETYLAMINO-4-CARBOXY-BUTYRYLAMINO)-3-[1-(R)-(1-(R)-CARBOXY-ETHYLCARBAMOYL)-ETHYLCARBAMOYL]-PROPYL}-2-( CARBOXY-PHENYLACETYLAMINO-METHYL)-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, D-ALANYL-D-ALANINE CARBOXYPEPTIDASE
Authors:McDonough, M.A, Lee, W, Silvaggi, N.R, Mobashery, S, Kelly, J.A.
Deposit date:2001-01-08
Release date:2001-02-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:A 1.2-A snapshot of the final step of bacterial cell wall biosynthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
3A4I
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BU of 3a4i by Molmil
Crystal structure of GMP synthetase PH1347 from Pyrococcus horikoshii OT3
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit B
Authors:Maruoka, S, Horita, S, Lee, W.C, Nagata, K, Tanokura, M.
Deposit date:2009-07-07
Release date:2009-07-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of the ATPPase subunit and its substrate-dependent association with the GATase Subunit: a novel regulatory mechanism for a two-subunit-type GMP synthetase from Pyrococcus horikoshii OT3.
J.Mol.Biol., 395, 2010
1YZE
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BU of 1yze by Molmil
Crystal structure of the N-terminal domain of USP7/HAUSP.
Descriptor: Ubiquitin carboxyl-terminal hydrolase 7
Authors:Saridakis, V, Sheng, Y, Sarkari, F, Holowaty, M.N, Shire, K, Nguyen, T, Zhang, R.G, Liao, J, Lee, W, Edwards, A.M, Arrowsmith, C.H, Frappier, L.
Deposit date:2005-02-28
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the p53 binding domain of HAUSP/USP7 bound to Epstein-Barr nuclear antigen 1 implications for EBV-mediated immortalization.
Mol.Cell, 18, 2005
8T56
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BU of 8t56 by Molmil
Structure of mechanically activated ion channel OSCA1.2 in peptidiscs
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL, CHOLESTEROL HEMISUCCINATE, ...
Authors:Burendei, B, Jojoa-Cruz, S, Lee, W.H, Ward, A.B.
Deposit date:2023-06-12
Release date:2023-12-27
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of mechanically activated ion channel OSCA2.3 reveals mobile elements in the transmembrane domain.
Structure, 32, 2024
1X25
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BU of 1x25 by Molmil
Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)
Descriptor: Hypothetical UPF0076 protein ST0811
Authors:Miyakawa, T, Lee, W.C, Hatano, K, Kato, Y, Sawano, Y, Miyazono, K, Nagata, K, Tanokura, M.
Deposit date:2005-04-20
Release date:2006-02-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7
Proteins, 62, 2006
4LMQ
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BU of 4lmq by Molmil
Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12
Descriptor: Stromal cell-derived factor 1, hu30D8 Fab heavy chain, hu30D8 Fab light chain
Authors:Zhong, Z, Wang, J, Li, B, Xiang, H, Ultsch, M, Coons, M, Wong, T, Chiang, N.Y, Clark, S, Clark, R, Quintana, L, Gribling, P, Suto, E, Barck, K, Corpuz, R, Yao, J, Takkar, R, Lee, W.P, Damico-Beyer, L.A, Carano, R.D, Adams, C, Kelley, R.F, Wang, W, Ferrara, N.
Deposit date:2013-07-10
Release date:2013-08-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.773 Å)
Cite:Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12.
Clin.Cancer Res., 19, 2013
8U53
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BU of 8u53 by Molmil
Mechanically activated ion channel OSCA3.1 in nanodiscs
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CSC1-like protein ERD4, PALMITIC ACID, ...
Authors:Jojoa-Cruz, S, Lee, W.H, Ward, A.B.
Deposit date:2023-09-12
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure-guided mutagenesis of OSCAs reveals differential activation to mechanical stimuli.
Elife, 12, 2024
1F5V
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BU of 1f5v by Molmil
STRUCTURE AND SITE-DIRECTED MUTAGENESIS OF A FLAVOPROTEIN FROM ESCHERICHIA COLI THAT REDUCES NITROCOMPOUNDS. ALTERATION OF PYRIDINE NUCLEOTIDE BINDING BY A SINGLE AMINO ACID SUBSTITUTION
Descriptor: FLAVIN MONONUCLEOTIDE, OXYGEN-INSENSITIVE NADPH NITROREDUCTASE
Authors:Kobori, T, Sasaki, H, Lee, W.C, Zenno, S, Saigo, K, Murphy, M.E.P, Tanokura, M.
Deposit date:2000-06-17
Release date:2001-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and site-directed mutagenesis of a flavoprotein from Escherichia coli that reduces nitrocompounds: alteration of pyridine nucleotide binding by a single amino acid substitution.
J.Biol.Chem., 276, 2001
1V3Y
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BU of 1v3y by Molmil
The crystal structure of peptide deformylase from Thermus thermophilus HB8
Descriptor: Peptide deformylase
Authors:Kamo, M, Kudo, N, Lee, W.C, Ito, K, Motoshim, H, Tanokura, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-07
Release date:2004-12-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:The crystal structure of peptide deformylase from Thermus thermophilus HB8
to be published
2MPV
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BU of 2mpv by Molmil
Structural insight into host recognition and biofilm formation by aggregative adherence fimbriae of enteroaggregative Esherichia coli
Descriptor: Major fimbrial subunit of aggregative adherence fimbria II AafA
Authors:Matthews, S.J, Yang, Y, Berry, A.A, Pakharukova, N, Garnett, J.A, Lee, W, Cota, E, Liu, B, Roy, S, Tuittila, M, Marchant, J, Inman, K.G, Ruiz-Perez, F, Mandomando, I, Nataro, J.P, Zavialov, A.V.
Deposit date:2014-06-04
Release date:2014-10-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into host recognition by aggregative adherence fimbriae of enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014
1FUW
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BU of 1fuw by Molmil
SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF A DOUBLE MUTANT SINGLE-CHAIN MONELLIN(SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
Descriptor: MONELLIN
Authors:Sung, Y.H, Shin, J, Jung, J, Lee, W.
Deposit date:2000-09-18
Release date:2001-06-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure, backbone dynamics, and stability of a double mutant single-chain monellin. structural origin of sweetness.
J.Biol.Chem., 276, 2001
2ABY
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BU of 2aby by Molmil
Solution structure of TA0743 from Thermoplasma acidophilum
Descriptor: hypothetical protein TA0743
Authors:Kim, B, Jung, J, Hong, E, Yee, A, Arrowsmith, C.H, Lee, W.
Deposit date:2005-07-18
Release date:2006-08-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the conserved novel-fold protein TA0743 from Thermoplasma acidophilum.
Proteins, 62, 2006
2JMK
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BU of 2jmk by Molmil
Solution structure of ta0956
Descriptor: Hypothetical protein Ta0956
Authors:Koo, B, Jung, J, Jung, H, Nam, H, Kim, Y, Yee, A, Arrowsmith, C.H, Lee, W.
Deposit date:2006-11-20
Release date:2007-10-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the hypothetical novel-fold protein TA0956 from Thermoplasma acidophilum
Proteins, 69, 2007
2N7Y
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BU of 2n7y by Molmil
NMR structure of metal-binding domain 1 of ATP7B
Descriptor: Copper-transporting ATPase 2
Authors:Yu, C, Lee, W, Dmitriev, O.
Deposit date:2015-09-27
Release date:2016-09-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of Metal Binding Domain 1 of the Copper Transporter ATP7B Reveals Mechanism of a Singular Wilson Disease Mutation.
Sci Rep, 8, 2018

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