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PDB: 322 results

3R4Z
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BU of 3r4z by Molmil
Crystal structure of alpha-neoagarobiose hydrolase (ALPHA-NABH) in complex with alpha-d-galactopyranose from Saccharophagus degradans 2-40
Descriptor: Glycosyl hydrolase family 32, N terminal, alpha-D-galactopyranose
Authors:Lee, S, Lee, J.Y, Ha, S.C, Shin, D.H, Kim, K.H, Bang, W.G, Kim, S.H, Choi, I.G.
Deposit date:2011-03-18
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a key enzyme in the agarolytic pathway, alpha-neoagarobiose hydrolase from Saccharophagus degradans 2-40
Biochem.Biophys.Res.Commun., 412, 2011
3R4Y
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BU of 3r4y by Molmil
Crystal structure of alpha-neoagarobiose hydrolase (ALPHA-NABH) from Saccharophagus degradans 2-40
Descriptor: Glycosyl hydrolase family 32, N terminal
Authors:Lee, S, Lee, J.Y, Ha, S.C, Shin, D.H, Kim, K.H, Bang, W.G, Kim, S.H, Choi, I.G.
Deposit date:2011-03-18
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a key enzyme in the agarolytic pathway, alpha-neoagarobiose hydrolase from Saccharophagus degradans 2-40
Biochem.Biophys.Res.Commun., 412, 2011
4YMM
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BU of 4ymm by Molmil
Structure of human DNA polymerase beta complexed with 7BG as the template base in a 1-nucleotide gapped DNA
Descriptor: DNA 10-mer (up-primer), DNA 16-mer (template), DNA 5-mer (dn-primer), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-06
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structure of human DNA polymerase beta complexed with 7BG as the template base in a 1-nucleotide gapped DNA
To Be Published
4YMO
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BU of 4ymo by Molmil
Structure of human DNA polymerase beta complexed with N7BG in the template opposite to incoming non-hydrolyzable CTP WITH MANGANESE IN THE ACTIVE SITE
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA 10-mer (up-primer), DNA 16-mer (template), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-07
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.
Biochemistry, 2018
4YMN
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BU of 4ymn by Molmil
Structure of human DNA polymerase beta complexed with N7BG in the template base paired with incoming non-hydrolyzable CTP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA 10-mer (up-primer), DNA 16-mer (template), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-06
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.
Biochemistry, 2018
4YJ6
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BU of 4yj6 by Molmil
The Crystal Structure of a Bacterial Aryl Acylamidase Belonging to the Amidase signature (AS) enzymes family
Descriptor: Aryl acylamidase, PHOSPHATE ION
Authors:Lee, S, Park, E.-H, Ko, H.-J, Bang, W.-G, Choi, I.-G.
Deposit date:2015-03-03
Release date:2015-11-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure analysis of a bacterial aryl acylamidase belonging to the amidase signature enzyme family
Biochem.Biophys.Res.Commun., 467, 2015
4YN4
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BU of 4yn4 by Molmil
Structure of human DNA polymerase beta complexed with N7BG in the template opposite to incoming non-hydrolyzable dTTP WITH MANGANESE IN THE ACTIVE SITE
Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA 10-mer (up-primer), DNA 16-mer (template), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-09
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.243 Å)
Cite:Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.
Biochemistry, 2018
1P7G
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BU of 1p7g by Molmil
Crystal structure of superoxide dismutase from Pyrobaculum aerophilum
Descriptor: ACETATE ION, BETA-MERCAPTOETHANOL, Superoxide dismutase
Authors:Lee, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2003-05-01
Release date:2003-12-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of superoxide dismutase from Pyrobaculum aerophilum presents a challenging case in molecular replacement with multiple molecules, pseudo-symmetry and twinning.
Acta Crystallogr.,Sect.D, 59, 2003
5WBW
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BU of 5wbw by Molmil
Yeast Hsp104 fragment 1-360
Descriptor: Heat shock protein 104
Authors:Lee, S.
Deposit date:2017-06-29
Release date:2018-01-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural determinants for protein unfolding and translocation by the Hsp104 protein disaggregase.
Biosci. Rep., 37, 2017
1QVR
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BU of 1qvr by Molmil
Crystal Structure Analysis of ClpB
Descriptor: ClpB protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLATINUM (II) ION
Authors:Lee, S, Sowa, M.E, Watanabe, Y, Sigler, P.B, Chiu, W, Yoshida, M, Tsai, F.T.F.
Deposit date:2003-08-28
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of ClpB: A Molecular Chaperone that Rescues Proteins from an Aggregated State
Cell(Cambridge,Mass.), 115, 2003
6PGQ
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BU of 6pgq by Molmil
Crystal structure of N-glycosylated human calcitonin receptor extracellular domain in complex with salmon calcitonin (22-32)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Calcitonin, ...
Authors:Lee, S, Pioszak, A.A.
Deposit date:2019-06-24
Release date:2020-02-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Calcitonin Receptor N-Glycosylation Enhances Peptide Hormone Affinity by Controlling Receptor Dynamics.
J.Mol.Biol., 432, 2020
6PFO
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BU of 6pfo by Molmil
Crystal structure of N-glycosylated human calcitonin receptor extracellular domain in complex with salmon calcitonin (16-32)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Calcitonin, Maltodextrin-binding protein,Calcitonin receptor, ...
Authors:Lee, S, Pioszak, A.A.
Deposit date:2019-06-21
Release date:2020-02-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Calcitonin Receptor N-Glycosylation Enhances Peptide Hormone Affinity by Controlling Receptor Dynamics.
J.Mol.Biol., 432, 2020
5VAN
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BU of 5van by Molmil
Crystal Structure of Beta-Klotho
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, S, Schlessinger, J.
Deposit date:2017-03-27
Release date:2018-01-31
Last modified:2021-03-24
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structures of beta-klotho reveal a 'zip code'-like mechanism for endocrine FGF signalling.
Nature, 553, 2018
5VAK
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BU of 5vak by Molmil
Crystal Structure of Beta-Klotho, Domain 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-klotho, ...
Authors:Lee, S, Schlessinger, J.
Deposit date:2017-03-27
Release date:2018-01-31
Last modified:2021-03-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of beta-klotho reveal a 'zip code'-like mechanism for endocrine FGF signalling.
Nature, 553, 2018
5VAQ
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BU of 5vaq by Molmil
Crystal Structure of Beta-Klotho in Complex with FGF21CT
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-klotho, Fibroblast growth factor 21, ...
Authors:Lee, S, Schlessinger, J.
Deposit date:2017-03-27
Release date:2018-01-31
Last modified:2021-03-24
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Structures of beta-klotho reveal a 'zip code'-like mechanism for endocrine FGF signalling.
Nature, 553, 2018
4ICS
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BU of 4ics by Molmil
Crystal structure of PepS from Streptococcus pneumoniae in complex with a substrate
Descriptor: Aminopeptidase PepS, GLYCINE, TRYPTOPHAN, ...
Authors:Lee, S, Kim, K.K, Ta, M.H.
Deposit date:2012-12-11
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure-based elucidation of the regulatory mechanism for aminopeptidase activity.
Acta Crystallogr.,Sect.D, 69, 2013
4ICR
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BU of 4icr by Molmil
Structural basis for substrate recognition and reaction mechanism of bacterial aminopeptidase peps
Descriptor: Aminopeptidase PepS, CACODYLATE ION, ZINC ION
Authors:Lee, S, Kim, K.K, Ta, M.H.
Deposit date:2012-12-11
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure-based elucidation of the regulatory mechanism for aminopeptidase activity.
Acta Crystallogr.,Sect.D, 69, 2013
3D4V
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BU of 3d4v by Molmil
Crystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base Pair
Descriptor: 5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(FMG)P*DTP*DGP*DCP*DC)-3', 5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3', DNA-3-methyladenine glycosylase 2
Authors:Lee, S, Bowman, B.R, Wang, S, Verdine, G.L.
Deposit date:2008-05-15
Release date:2008-09-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Synthesis and structure of duplex DNA containing the genotoxic nucleobase lesion N7-methylguanine.
J.Am.Chem.Soc., 130, 2008
4P2H
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BU of 4p2h by Molmil
Structure of human DNA polymerase complexed with N7MG in the template opposite to incoming non-hydrolyzable TTP with manganese in the active site
Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
Authors:Lee, S, Koag, M.C.
Deposit date:2014-03-04
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.987 Å)
Cite:Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine.
Nucleic Acids Res., 42, 2014
6MEV
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BU of 6mev by Molmil
Structure of JMJD6 bound to Mono-Methyl Arginine.
Descriptor: (2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid, 2-OXOGLUTARIC ACID, Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, ...
Authors:Lee, S, Zhang, G.
Deposit date:2018-09-07
Release date:2019-09-18
Last modified:2020-04-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:JMJD6 cleaves MePCE to release positive transcription elongation factor b (P-TEFb) in higher eukaryotes.
Elife, 9, 2020
5HHI
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BU of 5hhi by Molmil
Structure of human DNA polymerase beta Host-Guest complexed with CBZ-platinated N7-G
Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*AP*GP*GP*AP*GP*CP*AP*GP*G)-3'), DNA (5'-D(P*CP*CP*TP*GP*CP*TP*CP*CP*TP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2016-01-11
Release date:2017-01-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.517 Å)
Cite:Synthesis, structure, and biological evaluation of a platinum-carbazole conjugate.
Chem Biol Drug Des, 91, 2018
5IP5
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BU of 5ip5 by Molmil
Human DJ-1 complexed with Na-K-tartrate
Descriptor: L(+)-TARTARIC ACID, Protein deglycase DJ-1
Authors:Lee, S, Cha, S.-S, An, Y.J.
Deposit date:2016-03-09
Release date:2017-03-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Human DJ-1 complexed with Na-K-tartrate
To Be Published
4HYX
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BU of 4hyx by Molmil
Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-4 DMPC Bicelle
Descriptor: Bacteriorhodopsin, DECANE, GLYCEROL, ...
Authors:Lee, S, Stout, C.D, Zhang, Q.
Deposit date:2012-11-14
Release date:2013-03-20
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HWL
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BU of 4hwl by Molmil
Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-7 DMPC Bicelle
Descriptor: Bacteriorhodopsin, GLYCEROL, HEPTANE, ...
Authors:Lee, S, Stout, C.D, Zhang, Q.
Deposit date:2012-11-08
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
3CRA
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BU of 3cra by Molmil
Crystal Structure of Escherichia coli MazG, the Regulator of Nutritional Stress Response
Descriptor: Protein mazG
Authors:Lee, S, Kim, M.H, Kang, B.S, Kim, J.S, Kim, Y.G, Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008

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数据于2024-07-10公开中

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