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PDB: 322 件
5F5R
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TRAP1N-ADPNP
分子名称: Heat shock protein 75 kDa, mitochondrial, MAGNESIUM ION, ...
著者Tsai, F.T.F, Lee, S, Sung, N, Lee, J, Chang, C, Joachimiak, A.
登録日2015-12-04
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mitochondrial Hsp90 is a ligand-activated molecular chaperone coupling ATP binding to dimer closure through a coiled-coil intermediate.
Proc.Natl.Acad.Sci.USA, 113, 2016
5F3K
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X-Ray Crystallographic Structure of hTrap1 N-terminal Domain-apo
分子名称: Heat shock protein 75 kDa, mitochondrial
著者Sung, N, Lee, J, Kim, J, Chang, C, Joachimiak, A, Lee, S, Tsai, F.T.F.
登録日2015-12-02
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Mitochondrial Hsp90 is a ligand-activated molecular chaperone coupling ATP binding to dimer closure through a coiled-coil intermediate.
Proc.Natl.Acad.Sci.USA, 113, 2016
2X26
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BU of 2x26 by Molmil
Crystal structure of the periplasmic aliphatic sulphonate binding protein SsuA from Escherichia coli
分子名称: GLYCEROL, PERIPLASMIC ALIPHATIC SULPHONATES-BINDING PROTEIN
著者Beale, J, Lee, S, Iwata, S, Beis, K.
登録日2010-01-11
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of the Aliphatic Sulfonate-Binding Protein Ssua from Escherichia Coli
Acta Crystallogr.,Sect.F, 66, 2010
4TUP
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BU of 4tup by Molmil
Structure of human DNA polymerase beta complexed with GG as the template (GG0b) in a 1-nucleotide gapped DNA
分子名称: DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*GP*AP*TP*GP*GP*GP*C)-3'), DNA (5'-D(P*GP*TP*GP*GP*G)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014
4TUR
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BU of 4tur by Molmil
Human DNA polymerase beta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.169 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014
4TUS
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BU of 4tus by Molmil
Human DNA polymerase beta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2) WITH MANGANESE IN THE ACTIVE SITE.
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014
4TUQ
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BU of 4tuq by Molmil
Human DNA polymerase beta inserting dCMPNPP opposite GG template (GG0b).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*GP*AP*TP*GP*GP*GP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.367 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014
6U2O
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BU of 6u2o by Molmil
Structure of human DNA polymerase beta misinserting dAMPNPP opposite the 5'G of the cisplatin Pt-GG intrastrand crosslink
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ...
著者Ouzon-Shubeita, H, Vilas, C.K, Lee, S.
登録日2019-08-20
公開日2020-08-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of the Mutagenic Bypass of the Major Cisplatin-DNA Lesion by Human DNA Polymerase Beta Reveal Insights into Cisplatin-Induced Mutagenesis
To Be Published
6U6B
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BU of 6u6b by Molmil
Structure of human DNA polymerase beta misinserting dAMPNPP opposite the 5'G of the cisplatin Pt-GG intrastrand crosslink with Manganese in the active site
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ...
著者Ouzon-Shubeita, H, Vilas, C.K, Lee, S.
登録日2019-08-29
公開日2020-09-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.108 Å)
主引用文献Structural insights into the promutagenic bypass of the major cisplatin-induced DNA lesion.
Biochem.J., 477, 2020
6UI2
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Structure of human DNA polymerase eta complexed with N7MG in the template base paired with incoming non-hydrolyzable CTP
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(FMG)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Koag, M.C, Lee, S.
登録日2019-09-30
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Bypass of the Major Alkylative DNA Lesion by Human DNA Polymerase eta.
Molecules, 24, 2019
6UOP
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OsPYL/RCAR5 (24 - 29) solved by nanobeam diffraction tomography
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.351 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOR
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BU of 6uor by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 3 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOU
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BU of 6uou by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 9 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.04 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOQ
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BU of 6uoq by Molmil
OsPYL/RCAR5 residues 24-29 solved from electron diffraction stills
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.007 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UQI
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BU of 6uqi by Molmil
Crystal structure of Q38A human DNA polymerase eta bound with 8-oxoadenine (oxoA) and non-hydrolyzable dGTP analog (dGTP*)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(A38)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Jung, H, Lee, S.
登録日2019-10-19
公開日2020-10-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Q38A human DNA polymerase eta bound with 8-oxoadenine (oxoA) and non-hydrolyzable dGTP analog (dGTP*)
To Be Published
6UOS
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BU of 6uos by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 6 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOW
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BU of 6uow by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 12 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.2 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
3VPS
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BU of 3vps by Molmil
Structure of a novel NAD dependent-NDP-hexosamine 5,6-dehydratase, TunA, involved in tunicamycin biosynthesis
分子名称: NAD-dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Wyszynski, F.J, Lee, S.S, Yabe, T, Wang, H, Gomez-Escribano, J.P, Bibb, M.J, Lee, S.J, Davies, G.J, Davis, B.G.
登録日2012-03-12
公開日2012-04-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biosynthesis of nucleoside antibiotic tunicamycin proceeds via unique exo-glycal intermediates
To be published
6V5K
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BU of 6v5k by Molmil
Crystal structure of human DNA polymerase eta complexed with N7-nitrogen half-mustard guanine (NHMG) and dCTP*
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*TP*GP*TP*GP*AP*G)-3'), DNA (5'-D(*CP*AP*T*(QRV)P*CP*TP*CP*AP*CP*AP*CP*T)-3'), ...
著者Jung, H, Lee, S.
登録日2019-12-04
公開日2020-12-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal structure of human DNA polymerase eta complexed with N7-nitrogen half-mustard guanine (NHMG) and dCTP*
To Be Published
6VG6
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BU of 6vg6 by Molmil
Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dGTP*
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), DNA (5'-D(*TP*CP*AP*TP*(A38)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
著者Jung, H, Lee, S.
登録日2020-01-07
公開日2021-01-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Promutagenic bypass of 7,8-dihydro-8-oxoadenine by translesion synthesis DNA polymerase Dpo4.
Biochem.J., 477, 2020
6VGM
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BU of 6vgm by Molmil
Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dTTP*
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), DNA (5'-D(*TP*CP*AP*TP*(A38)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
著者Jung, H, Lee, S.
登録日2020-01-08
公開日2021-01-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Promutagenic bypass of 7,8-dihydro-8-oxoadenine by translesion synthesis DNA polymerase Dpo4.
Biochem.J., 477, 2020
3C9B
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BU of 3c9b by Molmil
Crystal structure of SeMet Vps75
分子名称: Vacuolar protein sorting-associated protein 75
著者Keck, J.L, Berndsen, C.E, Tsubota, T, Lindner, S.E, Lee, S, Holton, J.M, Kaufman, P.D, Denu, J.M.
登録日2008-02-15
公開日2008-08-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Molecular functions of the histone acetyltransferase chaperone complex Rtt109-Vps75
Nat.Struct.Mol.Biol., 15, 2008
7N1J
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BU of 7n1j by Molmil
Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder
分子名称: Binder, Fibroblast growth factor receptor 4
著者Park, J.S, Lee, S.
登録日2021-05-27
公開日2022-04-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Design of protein-binding proteins from the target structure alone.
Nature, 605, 2022
7N1K
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BU of 7n1k by Molmil
Crystal structure of a de novo-designed mini-protein targeting FGFR
分子名称: Binder
著者Park, J.S, Lee, S.
登録日2021-05-27
公開日2022-04-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Design of protein-binding proteins from the target structure alone.
Nature, 605, 2022
6W5X
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Crystal structure of human polymerase eta complexed with N7-benzylguanine and dCTP*
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*TP*GP*TP*GP*AP*G)-3'), DNA (5'-D(*CP*AP*TP*(DRG)P*CP*TP*CP*AP*CP*AP*CP*T)-3'), ...
著者Jung, H, Lee, S.
登録日2020-03-14
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structure of human polymerase eta complexed with N7-benzylguanine and dCTP*
To Be Published

223532

件を2024-08-07に公開中

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