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PDB: 784 results

5GRZ
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BU of 5grz by Molmil
Crystal structure of disulfide-bonded diabody
Descriptor: diabody
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GS2
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BU of 5gs2 by Molmil
Crystal structure of diabody complex with repebody and MBP
Descriptor: Maltose-binding periplasmic protein, anti-MBP, anti-repebody, ...
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.592 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRY
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BU of 5gry by Molmil
Crystal structure of disulfide-bonded diabody
Descriptor: diabody
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.639 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRU
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BU of 5gru by Molmil
Structure of mono-specific diabody
Descriptor: Maltose-binding periplasmic protein, diabody protein
Authors:Kim, J.H, Song, D.H, Youn, S.J, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRW
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BU of 5grw by Molmil
Crystal structure of homo-specific diabody
Descriptor: homo-specific diabody protein
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRV
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BU of 5grv by Molmil
Crystal structure of homo-specific diabody
Descriptor: homo-specific diabody heavy chain, homo-specific diabody light chain
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
7WV5
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BU of 7wv5 by Molmil
ectoTLR3-poly(I:C)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RNA (46-MER), ...
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-09
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WV3
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BU of 7wv3 by Molmil
Toll-like receptor3 linear cluster
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RNA (80-MER), ...
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-09
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
5GS3
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BU of 5gs3 by Molmil
Crystal structure of diabody
Descriptor: diabody protein
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRX
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BU of 5grx by Molmil
Crystal structure of disulfide-bonded diabody
Descriptor: diabody protein
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
7X89
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BU of 7x89 by Molmil
Tid1
Descriptor: DnaJ homolog subfamily A member 3, mitochondrial
Authors:Jang, J, Lee, S.H, Kang, D.H, Sim, D.W, Jo, K.S, Ryu, H, Kim, E.H, Ryu, K.S, Lee, J.H, Kim, J.H, Won, H.S.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies on the J-domain and GF-motif of the mitochondrial Hsp40, Tid1
To Be Published
4L1C
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BU of 4l1c by Molmil
Crystal structure of Dimerized N-terminal Domain of MinC
Descriptor: Probable septum site-determining protein MinC
Authors:An, J.Y, Kim, T.G, Park, K.R, Lee, J.G, Youn, H.S, Kang, J.Y, Lee, Y, Kang, G.B, Eom, S.H.
Deposit date:2013-06-03
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of the N-terminal domain of MinC dimerized via domain swapping.
J Synchrotron Radiat, 20, 2013
5WLY
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BU of 5wly by Molmil
E. coli LpxH- 8 mutations
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Bohl, T.E, Aihara, H, Shi, K, Lee, J.K.
Deposit date:2017-07-28
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:The substrate-binding cap of the UDP-diacylglucosamine pyrophosphatase LpxH is highly flexible, enabling facile substrate binding and product release.
J. Biol. Chem., 293, 2018
7RSJ
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BU of 7rsj by Molmil
Structure of the VPS34 kinase domain with compound 14
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-{4-[(7R,8R)-4-oxo-7-(propan-2-yl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazin-2-yl]pyridin-2-yl}cyclopropanecarboxamide, ...
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSV
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BU of 7rsv by Molmil
Structure of the VPS34 kinase domain with compound 5
Descriptor: (5aS,8aR,9S)-2-[(3R)-3-methylmorpholin-4-yl]-5,5a,6,7,8,8a-hexahydro-4H-cyclopenta[e]pyrazolo[1,5-a]pyrazin-4-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSP
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BU of 7rsp by Molmil
Structure of the VPS34 kinase domain with compound 14
Descriptor: (7R,8R)-2-[(3R)-3-methylmorpholin-4-yl]-7-(propan-2-yl)-6,7-dihydropyrazolo[1,5-a]pyrazin-4(5H)-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
4I9A
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BU of 4i9a by Molmil
Crystal Structure of Sus scrofa Quinolinate Phosphoribosyltransferase in Complex with Nicotinate Mononucleotide
Descriptor: NICOTINATE MONONUCLEOTIDE, quinolinate phosphoribosyltransferase
Authors:Youn, H.-S, Kim, M.-K, Kang, K.B, Kim, T.G, Lee, J.-G, An, J.Y, Park, K.R, Lee, Y, Kang, J.Y, Song, H.E, Park, I, Cho, C, Fukuoka, S, Eom, S.H.
Deposit date:2012-12-05
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Crystal structure of Sus scrofa quinolinate phosphoribosyltransferase in complex with nicotinate mononucleotide
Plos One, 8, 2013
7VPF
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BU of 7vpf by Molmil
Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4
Descriptor: CALCIUM ION, Xylose isomerase, ZINC ION
Authors:Park, H.H, Lee, J.H, Kwon, S.
Deposit date:2021-10-16
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4.
Biochem.Biophys.Res.Commun., 585, 2021
5Y7W
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BU of 5y7w by Molmil
Crystal structure of the Nco-A1 PAS-B domain with YL-2
Descriptor: Nuclear receptor coactivator 1, YL-2 peptide
Authors:Lee, Y.J, Yoon, H.S, Lee, J.H, Bae, J.H, Song, J.Y, Lim, H.S.
Deposit date:2017-08-18
Release date:2017-11-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Targeted Inhibition of the NCOA1/STAT6 Protein-Protein Interaction
J. Am. Chem. Soc., 139, 2017
7WV4
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BU of 7wv4 by Molmil
ectoTLR3-poly(I:C) cluster
Descriptor: RNA (80-MER), Toll-like receptor 3
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-09
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVF
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BU of 7wvf by Molmil
ectoTLR3-mAb12-poly(I:C) complex
Descriptor: RNA (46-MER), Toll-like receptor 3, mAb12
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-10
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVJ
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BU of 7wvj by Molmil
NT-mut(K117D,K139D,K145D) TLR3 -poly I:C complex
Descriptor: RNA (46-MER), Toll-like receptor 3
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-10
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVE
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BU of 7wve by Molmil
CT-mut (D523K,D524K,E527K) TLR3-poly(I:C) complex
Descriptor: RNA (46-MER), Toll-like receptor 3
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-10
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
5H0P
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BU of 5h0p by Molmil
Crystal structure of EF-hand protein mutant
Descriptor: CALCIUM ION, EF-hand domain-containing protein D2
Authors:Park, K.R, An, J.Y, Kang, J.Y, Lee, J.G, Youn, H.S, Lee, Y, Mun, S.A, Jun, C.D, Song, W.K, Eom, S.H.
Deposit date:2016-10-06
Release date:2017-09-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:Structural mechanism underlying regulation of human EFhd2/Swiprosin-1 actin-bundling activity by Ser183 phosphorylation.
Biochem. Biophys. Res. Commun., 483, 2017
8FNI
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BU of 8fni by Molmil
Cryo-EM structure of RNase-treated RESC-B in trypanosomal RNA editing
Descriptor: RNA-editing substrate-binding complex protein 10 (RESC10), RNA-editing substrate-binding complex protein 11 (RESC11), RNA-editing substrate-binding complex protein 13 (RESC13), ...
Authors:Liu, S, Wang, H, Li, X, Zhang, F, Lee, J.K.J, Li, Z, Yu, C, Zhao, X, Hu, J.J, Suematsu, T, Alvarez-Cabrera, A.L, Liu, Q, Zhang, L, Huang, L, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
Deposit date:2022-12-27
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Science, 381, 2023

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